BLASTN 2.12.0+
Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb
Miller (2000), "A greedy algorithm for aligning DNA sequences", J
Comput Biol 2000; 7(1-2):203-14.
Database: User specified sequence set (Input: /tmp/rose_928557087640).
1 sequences; 60 total letters
Query= RU05199
Length=639
Score E
Sequences producing significant alignments: (Bits) Value
yueji_06540 104 1e-27
> yueji_06540
Length=60
Score = 104 bits (54), Expect = 1e-27
Identities = 58/60 (97%), Gaps = 0/60 (0%)
Strand=Plus/Plus
Query 470 CTAGCTGCTGGGGTTTTGATCCTAGATATTCAGATATTGGTTTAAAAGATAAAGAAAAAA 529
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Sbjct 1 CTAGCTGCTGGGGTTTTGATCCTAGATATTCAGATATTGGTTTAAAAGAGAAAGAAGAAA 60
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.33 0.620 1.10
Effective search space used: 32812
Database: User specified sequence set (Input: /tmp/rose_928557087640).
Posted date: Unknown
Number of letters in database: 60
Number of sequences in database: 1
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 2, Extension: 2
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