BLASTN 2.9.0+
Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb
Miller (2000), "A greedy algorithm for aligning DNA sequences", J
Comput Biol 2000; 7(1-2):203-14.
Database: User specified sequence set (Input:
/var/www/html/bioinfo/tmp/rose_6478770704447).
1 sequences; 60 total letters
Query= RU51770
Length=268
Score E
Sequences producing significant alignments: (Bits) Value
yueji_07064 102 2e-27
> yueji_07064
Length=60
Score = 102 bits (53), Expect = 2e-27
Identities = 59/61 (97%), Gaps = 1/61 (2%)
Strand=Plus/Plus
Query 64 CAAATGGCTTCTTCAGATTTCACAGACCCTTGAATTCATAGTCATCTCCTTCTTTTTTCC 123
|||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1 CAAATGGCTTCTACAGATTTCACAGACCCTTGAATTCATAGTCATCT-CTTCTTTTTTCC 59
Query 124 T 124
|
Sbjct 60 T 60
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.33 0.620 1.10
Effective search space used: 13520
Database: User specified sequence set (Input:
/var/www/html/bioinfo/tmp/rose_6478770704447).
Posted date: Unknown
Number of letters in database: 60
Number of sequences in database: 1
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 2, Extension: 2
|