BLASTN 2.9.0+
Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb
Miller (2000), "A greedy algorithm for aligning DNA sequences", J
Comput Biol 2000; 7(1-2):203-14.
Database: User specified sequence set (Input:
/var/www/html/bioinfo/tmp/rose_149883905864).
1 sequences; 60 total letters
Query= RU06143
Length=1363
Score E
Sequences producing significant alignments: (Bits) Value
yueji_08126 89.0 1e-22
> yueji_08126
Length=60
Score = 89.0 bits (46), Expect = 1e-22
Identities = 56/60 (93%), Gaps = 1/60 (2%)
Strand=Plus/Plus
Query 1040 GTGATAATATTAGGGTTAGGAAAGTGACCAAGTCTAAGTGTGTCGGTTGCT-ACTTTTTT 1098
||||||||||||| || ||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1 GTGATAATATTAGACTTGGGAAAGTGACCAAGTCTAAGTGTGTCGGTTGCTTACTTTTTT 60
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.33 0.620 1.10
Effective search space used: 69054
Database: User specified sequence set (Input:
/var/www/html/bioinfo/tmp/rose_149883905864).
Posted date: Unknown
Number of letters in database: 60
Number of sequences in database: 1
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 2, Extension: 2
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