BLASTN 2.9.0+
Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb
Miller (2000), "A greedy algorithm for aligning DNA sequences", J
Comput Biol 2000; 7(1-2):203-14.
Database: User specified sequence set (Input:
/var/www/html/bioinfo/tmp/rose_4932691546596).
1 sequences; 60 total letters
Query= RU00002
Length=730
Score E
Sequences producing significant alignments: (Bits) Value
yueji_08244 115 5e-31
> yueji_08244
Length=60
Score = 115 bits (60), Expect = 5e-31
Identities = 60/60 (100%), Gaps = 0/60 (0%)
Strand=Plus/Minus
Query 541 TGAATGGATTAACGAGATTCCCACTGTCCCTGTCTACTATCCAGCGAAACCACAGCCAAG 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 60 TGAATGGATTAACGAGATTCCCACTGTCCCTGTCTACTATCCAGCGAAACCACAGCCAAG 1
Score = 69.8 bits (36), Expect = 4e-17
Identities = 38/39 (97%), Gaps = 0/39 (0%)
Strand=Plus/Plus
Query 686 TAGTATACAGGGACAGTGGGAATCTCGTTAATCCATTCA 724
||||| |||||||||||||||||||||||||||||||||
Sbjct 22 TAGTAGACAGGGACAGTGGGAATCTCGTTAATCCATTCA 60
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.33 0.620 1.10
Effective search space used: 36771
Database: User specified sequence set (Input:
/var/www/html/bioinfo/tmp/rose_4932691546596).
Posted date: Unknown
Number of letters in database: 60
Number of sequences in database: 1
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 2, Extension: 2
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