BLASTN 2.9.0+
Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb
Miller (2000), "A greedy algorithm for aligning DNA sequences", J
Comput Biol 2000; 7(1-2):203-14.
Database: User specified sequence set (Input:
/var/www/html/bioinfo/tmp/rose_7196011281079).
1 sequences; 60 total letters
Query= RU06741
Length=1456
Score E
Sequences producing significant alignments: (Bits) Value
yueji_08502 100 4e-26
> yueji_08502
Length=60
Score = 100 bits (52), Expect = 4e-26
Identities = 56/57 (98%), Gaps = 1/57 (2%)
Strand=Plus/Minus
Query 240 AGTGCCCCG-CCTCCGATTCACGGAATAAGTAAAATAACGTTAAAAGTAGTGGTATT 295
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 57 AGTGCCCCGCCCTCCGATTCACGGAATAAGTAAAATAACGTTAAAAGTAGTGGTATT 1
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.33 0.620 1.10
Effective search space used: 73797
Database: User specified sequence set (Input:
/var/www/html/bioinfo/tmp/rose_7196011281079).
Posted date: Unknown
Number of letters in database: 60
Number of sequences in database: 1
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 2, Extension: 2
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