BLASTN 2.9.0+
Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb
Miller (2000), "A greedy algorithm for aligning DNA sequences", J
Comput Biol 2000; 7(1-2):203-14.
Database: User specified sequence set (Input:
/var/www/html/bioinfo/tmp/rose_2978247453897).
1 sequences; 60 total letters
Query= RU06636
Length=1400
Score E
Sequences producing significant alignments: (Bits) Value
yueji_08607 108 2e-28
> yueji_08607
Length=60
Score = 108 bits (56), Expect = 2e-28
Identities = 60/61 (98%), Gaps = 1/61 (2%)
Strand=Plus/Plus
Query 133 AGACAGGTTAGTTTTACCCTACTGATGACAGTGTCGCAATAGTAATTCAACCTAGTACGA 192
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1 AGACAGGTTAGTTTTACCC-ACTGATGACAGTGTCGCAATAGTAATTCAACCTAGTACGA 59
Query 193 G 193
|
Sbjct 60 G 60
Score = 108 bits (56), Expect = 2e-28
Identities = 60/61 (98%), Gaps = 1/61 (2%)
Strand=Plus/Minus
Query 822 CTCGTACTAGGTTGAATTACTATTGCGACACTGTCATCAGTAGGGTAAAACTAACCTGTC 881
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 60 CTCGTACTAGGTTGAATTACTATTGCGACACTGTCATCAGT-GGGTAAAACTAACCTGTC 2
Query 882 T 882
|
Sbjct 1 T 1
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.33 0.620 1.10
Effective search space used: 70941
Database: User specified sequence set (Input:
/var/www/html/bioinfo/tmp/rose_2978247453897).
Posted date: Unknown
Number of letters in database: 60
Number of sequences in database: 1
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 2, Extension: 2
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