BLASTN 2.9.0+
Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb
Miller (2000), "A greedy algorithm for aligning DNA sequences", J
Comput Biol 2000; 7(1-2):203-14.
Database: User specified sequence set (Input:
/var/www/html/bioinfo/tmp/rose_2110908491044).
1 sequences; 60 total letters
Query= RU05955
Length=531
Score E
Sequences producing significant alignments: (Bits) Value
yueji_09298 83.2 2e-21
> yueji_09298
Length=60
Score = 83.2 bits (43), Expect = 2e-21
Identities = 55/58 (95%), Gaps = 3/58 (5%)
Strand=Plus/Plus
Query 444 GTGAAC-TTTGG-TTTG-TTTTAATTTATTCAGGTCTTTTCTTATACAAGAGGCCCCC 498
|||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1 GTGAACTTTTGGTTTTGTTTTTAATTTATTCAGGTCTTTTCTTATACAAGAGGCCCCC 58
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.33 0.620 1.10
Effective search space used: 27196
Database: User specified sequence set (Input:
/var/www/html/bioinfo/tmp/rose_2110908491044).
Posted date: Unknown
Number of letters in database: 60
Number of sequences in database: 1
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 2, Extension: 2
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