BLASTN 2.9.0+
Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb
Miller (2000), "A greedy algorithm for aligning DNA sequences", J
Comput Biol 2000; 7(1-2):203-14.
Database: User specified sequence set (Input:
/var/www/html/bioinfo/tmp/rose_9789692944354).
1 sequences; 60 total letters
Query= RU05303
Length=1895
Score E
Sequences producing significant alignments: (Bits) Value
yueji_09700 60.2 7e-14
> yueji_09700
Length=60
Score = 60.2 bits (31), Expect = 7e-14
Identities = 31/31 (100%), Gaps = 0/31 (0%)
Strand=Plus/Plus
Query 533 ACTTGCTCATTGCTCACCTCTTGAGGCTTGA 563
|||||||||||||||||||||||||||||||
Sbjct 30 ACTTGCTCATTGCTCACCTCTTGAGGCTTGA 60
Score = 58.3 bits (30), Expect = 3e-13
Identities = 32/33 (97%), Gaps = 0/33 (0%)
Strand=Plus/Minus
Query 789 AAGTACTATTGGTTTGGTTCTGATCAGTAGCAG 821
||||||||||||||||||||||||||||| |||
Sbjct 33 AAGTACTATTGGTTTGGTTCTGATCAGTACCAG 1
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.33 0.620 1.10
Effective search space used: 96186
Database: User specified sequence set (Input:
/var/www/html/bioinfo/tmp/rose_9789692944354).
Posted date: Unknown
Number of letters in database: 60
Number of sequences in database: 1
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 2, Extension: 2
|