BLASTN 2.9.0+
Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb
Miller (2000), "A greedy algorithm for aligning DNA sequences", J
Comput Biol 2000; 7(1-2):203-14.
Database: User specified sequence set (Input:
/var/www/html/bioinfo/tmp/rose_7386831250946).
1 sequences; 60 total letters
Query= RU01784
Length=1324
Score E
Sequences producing significant alignments: (Bits) Value
yueji_10852 75.5 1e-18
> yueji_10852
Length=60
Score = 75.5 bits (39), Expect = 1e-18
Identities = 57/62 (92%), Gaps = 4/62 (6%)
Strand=Plus/Minus
Query 27 AAGGGGTTACTAGTATTGTAAAGTAAACTAGTTCTAGT-AT-TTACTAGACCAAAAGTGT 84
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Sbjct 60 AAGGGGTTACTAGTATTGTAAAGTAAACTAGTTC-AGTCAGATTAC-AGACCAAAAGTGT 3
Query 85 TG 86
||
Sbjct 2 TG 1
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.33 0.620 1.10
Effective search space used: 67065
Database: User specified sequence set (Input:
/var/www/html/bioinfo/tmp/rose_7386831250946).
Posted date: Unknown
Number of letters in database: 60
Number of sequences in database: 1
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 2, Extension: 2
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