BLASTN 2.9.0+
Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb
Miller (2000), "A greedy algorithm for aligning DNA sequences", J
Comput Biol 2000; 7(1-2):203-14.
Database: User specified sequence set (Input:
/var/www/html/bioinfo/tmp/rose_5249943417470).
1 sequences; 60 total letters
Query= RU02026
Length=743
Score E
Sequences producing significant alignments: (Bits) Value
yueji_11436 71.7 1e-17
> yueji_11436
Length=60
Score = 71.7 bits (37), Expect = 1e-17
Identities = 39/40 (98%), Gaps = 0/40 (0%)
Strand=Plus/Plus
Query 173 AAACAGTAATCATCTGCACGGTCATCCCCAAGCTTTTCTA 212
|||| |||||||||||||||||||||||||||||||||||
Sbjct 1 AAACTGTAATCATCTGCACGGTCATCCCCAAGCTTTTCTA 40
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.33 0.620 1.10
Effective search space used: 37434
Database: User specified sequence set (Input:
/var/www/html/bioinfo/tmp/rose_5249943417470).
Posted date: Unknown
Number of letters in database: 60
Number of sequences in database: 1
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 2, Extension: 2
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