BLASTN 2.12.0+
Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb
Miller (2000), "A greedy algorithm for aligning DNA sequences", J
Comput Biol 2000; 7(1-2):203-14.
Database: User specified sequence set (Input: /tmp/rose_4268674271620).
1 sequences; 60 total letters
Query= RU02111
Length=1372
Score E
Sequences producing significant alignments: (Bits) Value
yueji_12007 115 1e-30
> yueji_12007
Length=60
Score = 115 bits (60), Expect = 1e-30
Identities = 60/60 (100%), Gaps = 0/60 (0%)
Strand=Plus/Plus
Query 1089 GCATACATACATTGTCTCGCAATGTACATGCTTATACGACTTCTAGATGGAAATTTTCTT 1148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 GCATACATACATTGTCTCGCAATGTACATGCTTATACGACTTCTAGATGGAAATTTTCTT 60
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.33 0.620 1.10
Effective search space used: 69513
Database: User specified sequence set (Input: /tmp/rose_4268674271620).
Posted date: Unknown
Number of letters in database: 60
Number of sequences in database: 1
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 2, Extension: 2
|