BLASTN 2.9.0+
Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb
Miller (2000), "A greedy algorithm for aligning DNA sequences", J
Comput Biol 2000; 7(1-2):203-14.
Database: User specified sequence set (Input:
/var/www/html/bioinfo/tmp/rose_6522884351174).
1 sequences; 60 total letters
Query= RU06019
Length=1124
Score E
Sequences producing significant alignments: (Bits) Value
yueji_12687 90.9 3e-23
> yueji_12687
Length=60
Score = 90.9 bits (47), Expect = 3e-23
Identities = 53/55 (96%), Gaps = 1/55 (2%)
Strand=Plus/Minus
Query 15 AAAAT-AAATATCAATATACTTCGGTTGGTTTCGATACACATAAGACAGCACTGG 68
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Sbjct 55 AAAATAAAATATCAATATACTTCGGTTGGTTTCGATACACAGAAGACAGCACTGG 1
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.33 0.620 1.10
Effective search space used: 56865
Database: User specified sequence set (Input:
/var/www/html/bioinfo/tmp/rose_6522884351174).
Posted date: Unknown
Number of letters in database: 60
Number of sequences in database: 1
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 2, Extension: 2
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