BLASTN 2.9.0+
Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb
Miller (2000), "A greedy algorithm for aligning DNA sequences", J
Comput Biol 2000; 7(1-2):203-14.
Database: User specified sequence set (Input:
/var/www/html/bioinfo/tmp/rose_9151259058594).
1 sequences; 60 total letters
Query= RU02661
Length=1284
Score E
Sequences producing significant alignments: (Bits) Value
yueji_13200 89.0 1e-22
> yueji_13200
Length=60
Score = 89.0 bits (46), Expect = 1e-22
Identities = 54/56 (96%), Gaps = 2/56 (4%)
Strand=Plus/Plus
Query 94 ATGTCGAGACAGATGAAGTATATGCGCAGATGACCTTACAACCGCTAAATCCACAA 149
||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||
Sbjct 1 ATGTCGAGACAGATGAAGTATATGCGCAGATGACCTTACAACCGC-AAA-CCACAA 54
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.33 0.620 1.10
Effective search space used: 65025
Database: User specified sequence set (Input:
/var/www/html/bioinfo/tmp/rose_9151259058594).
Posted date: Unknown
Number of letters in database: 60
Number of sequences in database: 1
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 2, Extension: 2
|