BLASTN 2.12.0+
Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb
Miller (2000), "A greedy algorithm for aligning DNA sequences", J
Comput Biol 2000; 7(1-2):203-14.
Database: User specified sequence set (Input: /tmp/rose_1273378912332).
1 sequences; 60 total letters
Query= RU06385
Length=1939
Score E
Sequences producing significant alignments: (Bits) Value
yueji_14452 110 7e-29
> yueji_14452
Length=60
Score = 110 bits (57), Expect = 7e-29
Identities = 59/60 (98%), Gaps = 0/60 (0%)
Strand=Plus/Plus
Query 1864 TCACACAATTGTTTGTGTCAACCAACTATTAGTGTTGCAGAGCTCTAGAAATGGGAAAAA 1923
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1 TCACACAATTGTTTGTGTCAACCAACTATTAGTGTTGCAGAGCTCTAGAAATGGAAAAAA 60
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.33 0.620 1.10
Effective search space used: 98430
Database: User specified sequence set (Input: /tmp/rose_1273378912332).
Posted date: Unknown
Number of letters in database: 60
Number of sequences in database: 1
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 2, Extension: 2
|