BLASTX 7.6.2
Query= RU00194 /QuerySize=293
(292 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G28280.1 | Symbols: | VQ motif-containing pro... 80 2e-016
TAIR9_protein||AT1G28280.2 | Symbols: | VQ motif-containing pro... 80 2e-016
TAIR9_protein||AT3G15300.1 | Symbols: | VQ motif-containing pro... 75 9e-015
TAIR9_protein||AT5G53830.1 | Symbols: | VQ motif-containing pro... 74 2e-014
>TAIR9_protein||AT1G28280.1 | Symbols: | VQ motif-containing protein |
chr1:9886652-9887395 REVERSE
Length = 248
Score = 80 bits (196), Expect = 2e-016
Identities = 51/98 (52%), Positives = 63/98 (64%), Gaps = 16/98 (16%)
Frame = -2
Query: 252 PTTP--KLTPRSDS-NPYATTFVQADSSNFKHVVQMLTGSSE-----TTTKQTNKHTQES 97
PTTP +T RS+S NPY TTFVQAD+S+FK VVQMLTGS+E ++ K H Q
Sbjct: 38 PTTPTRHVTTRSESGNPYPTTFVQADTSSFKQVVQMLTGSAERPKHGSSLKPNPTHHQPD 97
Query: 96 SSSPLSSKNFTIPPVKTAPKKQQ------GFKLYERRS 1
S SS F+IPP+K P K+Q GF+LYERR+
Sbjct: 98 PRSTPSS--FSIPPIKAVPNKKQSSSSASGFRLYERRN 133
>TAIR9_protein||AT1G28280.2 | Symbols: | VQ motif-containing protein |
chr1:9886297-9887395 REVERSE
Length = 244
Score = 80 bits (196), Expect = 2e-016
Identities = 51/98 (52%), Positives = 63/98 (64%), Gaps = 16/98 (16%)
Frame = -2
Query: 252 PTTP--KLTPRSDS-NPYATTFVQADSSNFKHVVQMLTGSSE-----TTTKQTNKHTQES 97
PTTP +T RS+S NPY TTFVQAD+S+FK VVQMLTGS+E ++ K H Q
Sbjct: 38 PTTPTRHVTTRSESGNPYPTTFVQADTSSFKQVVQMLTGSAERPKHGSSLKPNPTHHQPD 97
Query: 96 SSSPLSSKNFTIPPVKTAPKKQQ------GFKLYERRS 1
S SS F+IPP+K P K+Q GF+LYERR+
Sbjct: 98 PRSTPSS--FSIPPIKAVPNKKQSSSSASGFRLYERRN 133
>TAIR9_protein||AT3G15300.1 | Symbols: | VQ motif-containing protein |
chr3:5147551-5148210 REVERSE
Length = 220
Score = 75 bits (182), Expect = 9e-015
Identities = 42/74 (56%), Positives = 50/74 (67%), Gaps = 5/74 (6%)
Frame = -2
Query: 219 SNPYATTFVQADSSNFKHVVQMLTGSSETTTKQTNKHTQESSSSPLSSKNFTIPPVKTA- 43
S+ Y TTFVQADSS+FK VVQMLTGSS + + + ++P NF IPP+KTA
Sbjct: 32 SDHYPTTFVQADSSSFKQVVQMLTGSSSPRSPDSPR----PPTTPSGKGNFVIPPIKTAQ 87
Query: 42 PKKQQGFKLYERRS 1
PKK G KLYERRS
Sbjct: 88 PKKHSGNKLYERRS 101
>TAIR9_protein||AT5G53830.1 | Symbols: | VQ motif-containing protein |
chr5:21857057-21857788 FORWARD
Length = 244
Score = 74 bits (179), Expect = 2e-014
Identities = 44/76 (57%), Positives = 51/76 (67%), Gaps = 12/76 (15%)
Frame = -2
Query: 219 SNPYATTFVQADSSNFKHVVQMLTGSSETTTKQTNKHTQESSSSPLSSKN----FTIPPV 52
SNPY TTFVQAD+S FK VVQMLTGSS TT T KH + SP+++ N F+IPP+
Sbjct: 44 SNPYPTTFVQADTSTFKQVVQMLTGSSTDTT--TGKH--HEAPSPVNNNNKGSSFSIPPI 99
Query: 51 KTAPKKQQGFKLYERR 4
KK FKLYERR
Sbjct: 100 ----KKTNSFKLYERR 111
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 122,173,568
Number of Sequences: 33410
Number of Extensions: 122173568
Number of Successful Extensions: 10168541
Number of sequences better than 0.0: 0
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