BLASTX 7.6.2
Query= RU00231 /QuerySize=619
(618 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G09830.1 | Symbols: | FUNCTIONS IN: molecular... 183 7e-047
TAIR9_protein||AT5G64780.1 | Symbols: | FUNCTIONS IN: molecular... 126 1e-029
>TAIR9_protein||AT4G09830.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
Uncharacterised conserved protein UCP009193 (InterPro:IPR016549); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G64780.1); Has 56 Blast hits to 56 proteins in 10 species:
Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 56; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr4:6188866-6190591
FORWARD
Length = 192
Score = 183 bits (464), Expect = 7e-047
Identities = 97/164 (59%), Positives = 116/164 (70%), Gaps = 6/164 (3%)
Frame = +3
Query: 75 SVATSLDEVDRSMYTSFCSAANSLSQLYTQAMNHQKLSFQAGERHALDKIYQWICRQQEE 254
S ATSLDEVDR++Y SF +AANSLSQLYTQ+MNHQKLSFQAGERH L+K+YQWI RQQE
Sbjct: 7 STATSLDEVDRTVYASFRTAANSLSQLYTQSMNHQKLSFQAGERHGLEKLYQWIWRQQEG 66
Query: 255 GSRVATGDILNYLQNELDYCGEEPSMSPRVAVQHQHTPSSLHFTNXXXXXXXXXXXXXTG 434
GSRV DI+NY+QNEL+ C +EP +SPR ++H TN
Sbjct: 67 GSRVTPMDIVNYIQNELECCIDEPPISPRAPPPQ----PTMHVTNPGLMTTSGTSFPTAV 122
Query: 435 QGIRSEQCDHQPKNSVFSNALSSPVRQSLQHYHISYPGPGLPSG 566
+RSEQC++Q KNSVFSNALSSP+R+SLQ+Y I P G SG
Sbjct: 123 PVVRSEQCENQAKNSVFSNALSSPIRRSLQNYQI--PQGGYTSG 164
>TAIR9_protein||AT5G64780.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
Uncharacterised conserved protein UCP009193 (InterPro:IPR016549); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT4G09830.1); Has 56 Blast hits to 56 proteins in 10 species:
Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 56; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink). |
chr5:25900700-25901955 REVERSE
Length = 176
Score = 126 bits (316), Expect = 1e-029
Identities = 74/159 (46%), Positives = 99/159 (62%), Gaps = 16/159 (10%)
Frame = +3
Query: 75 SVATSLDEVDRSMYTSFCSAANSLSQLYTQAMNHQKLSFQAGERHALDKIYQWICRQQEE 254
S AT LDEVDR+MY +F AANSLSQLYT AMNHQ++SF AGER ++K+YQWI RQ+E+
Sbjct: 7 SEATRLDEVDRTMYGAFRGAANSLSQLYTHAMNHQRVSFLAGERRGMEKLYQWIVRQEEQ 66
Query: 255 GSRVATGDILNYLQNELDYCGEEPS--MSPRVAVQHQHTPSSLHFTNXXXXXXXXXXXXX 428
G+RV+T DI YLQN L+Y EE S + + QHQ P +++
Sbjct: 67 GTRVSTADITTYLQNALEYEPEETSIPLPMQEFYQHQFAPPNVN----------TSVAHV 116
Query: 429 TGQGIRSEQ---CDHQPKNSVFSNALSSPVRQSLQHYHI 536
I +Q C +Q K + N LSSPVR++LQ +++
Sbjct: 117 PSSHIAQQQHYDC-NQEKLLIPPNGLSSPVRRTLQDFNL 154
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 122,173,568
Number of Sequences: 33410
Number of Extensions: 122173568
Number of Successful Extensions: 10168541
Number of sequences better than 0.0: 0
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