BLASTX 7.6.2
Query= RU00254 /QuerySize=501
(500 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G31720.2 | Symbols: TAFII15, STG1 | TAFII15 (T... 199 9e-052
TAIR9_protein||AT4G31720.1 | Symbols: TAFII15, TAF10, STG1 | TAF... 199 9e-052
>TAIR9_protein||AT4G31720.2 | Symbols: TAFII15, STG1 | TAFII15 (TBP-ASSOCIATED
FACTOR II 15); RNA polymerase II transcription factor/ transcription
factor | chr4:15354223-15355704 REVERSE
Length = 135
Score = 199 bits (505), Expect = 9e-052
Identities = 103/137 (75%), Positives = 114/137 (83%), Gaps = 3/137 (2%)
Frame = -1
Query: 416 HQSQQSSEGRHDDDEASLSEFLASLMDYTPTIPDELVEHYLAKSGFQCPDVRLIRLVAVA 237
+ QQS E +H+DD A+L+EFLASLMDYTPTIPD+LVEHYLAKSGFQCPDVRLIRLVAVA
Sbjct: 2 NHGQQSGEAKHEDD-AALTEFLASLMDYTPTIPDDLVEHYLAKSGFQCPDVRLIRLVAVA 60
Query: 236 TQKFVAEVATDALQQCKARQAAVVXXXXXXXXXXXXPILTMEDLSKALREYGVNVKHQEY 57
TQKFVA+VA+DALQ CKAR A VV +LTMEDLSKALREYGVNVKH EY
Sbjct: 61 TQKFVADVASDALQHCKARPAPVVKDKKQQKDKRL--VLTMEDLSKALREYGVNVKHPEY 118
Query: 56 FADSPSTGMDPASREE* 6
FADSPSTGMDPA+R+E*
Sbjct: 119 FADSPSTGMDPATRDE* 135
>TAIR9_protein||AT4G31720.1 | Symbols: TAFII15, TAF10, STG1 | TAFII15
(TBP-ASSOCIATED FACTOR II 15); RNA polymerase II transcription factor/
transcription factor | chr4:15354223-15355704 REVERSE
Length = 135
Score = 199 bits (505), Expect = 9e-052
Identities = 103/137 (75%), Positives = 114/137 (83%), Gaps = 3/137 (2%)
Frame = -1
Query: 416 HQSQQSSEGRHDDDEASLSEFLASLMDYTPTIPDELVEHYLAKSGFQCPDVRLIRLVAVA 237
+ QQS E +H+DD A+L+EFLASLMDYTPTIPD+LVEHYLAKSGFQCPDVRLIRLVAVA
Sbjct: 2 NHGQQSGEAKHEDD-AALTEFLASLMDYTPTIPDDLVEHYLAKSGFQCPDVRLIRLVAVA 60
Query: 236 TQKFVAEVATDALQQCKARQAAVVXXXXXXXXXXXXPILTMEDLSKALREYGVNVKHQEY 57
TQKFVA+VA+DALQ CKAR A VV +LTMEDLSKALREYGVNVKH EY
Sbjct: 61 TQKFVADVASDALQHCKARPAPVVKDKKQQKDKRL--VLTMEDLSKALREYGVNVKHPEY 118
Query: 56 FADSPSTGMDPASREE* 6
FADSPSTGMDPA+R+E*
Sbjct: 119 FADSPSTGMDPATRDE* 135
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 122,173,568
Number of Sequences: 33410
Number of Extensions: 122173568
Number of Successful Extensions: 10168541
Number of sequences better than 0.0: 0
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