BLASTX 7.6.2
Query= RU00438 /QuerySize=580
(579 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G55980.1 | Symbols: SZF1, ATSZF1 | SZF1 (SALT-... 104 5e-023
TAIR9_protein||AT2G40140.1 | Symbols: CZF1, ZFAR1, SZF2, ATSZF2 ... 103 1e-022
TAIR9_protein||AT2G40140.2 | Symbols: CZF1, ZFAR1, SZF2, ATSZF2 ... 103 1e-022
TAIR9_protein||AT5G58620.1 | Symbols: | zinc finger (CCCH-type)... 97 8e-021
TAIR9_protein||AT5G12850.1 | Symbols: | zinc finger (CCCH-type)... 62 2e-010
TAIR9_protein||AT2G41900.1 | Symbols: | zinc finger (CCCH-type)... 59 2e-009
>TAIR9_protein||AT3G55980.1 | Symbols: SZF1, ATSZF1 | SZF1 (SALT-INDUCIBLE ZINC
FINGER 1); transcription factor | chr3:20776857-20778599 FORWARD
Length = 581
Score = 104 bits (258), Expect = 5e-023
Identities = 60/112 (53%), Positives = 75/112 (66%), Gaps = 19/112 (16%)
Frame = -1
Query: 486 HGFDASGAA--AVLSSRSAAFAKQRSQSFIERSANHNYGFSSPADSGTPKASNLSNWGSP 313
HGF++S AA AV+ +RS AFAK RS SF PA P+ SNLS+WGSP
Sbjct: 451 HGFESSAAAAVAVMKARSTAFAK-RSLSF------------KPATQAAPQ-SNLSDWGSP 496
Query: 312 SGKLDWGIQGEELNKLRKSASFGYRNNGNSVPT---VDEPDVSWVNTLVKDA 166
+GKL+WG++GEELNK+R+S SFG N N+ DEPDVSWVN+LVKD+
Sbjct: 497 NGKLEWGMKGEELNKMRRSVSFGIHGNNNNNAARDYRDEPDVSWVNSLVKDS 548
>TAIR9_protein||AT2G40140.1 | Symbols: CZF1, ZFAR1, SZF2, ATSZF2 | CZF1;
transcription factor | chr2:16772537-16774330 FORWARD
Length = 598
Score = 103 bits (255), Expect = 1e-022
Identities = 63/146 (43%), Positives = 85/146 (58%), Gaps = 21/146 (14%)
Frame = -1
Query: 450 SSRSAAFAKQRSQSFIERSANHNYGFSSPADSGTPKASNLSNWGSPSGKLDWGIQGEELN 271
++ +AA RS +F +RS + PA P ASN+S+WGSP+GKL+WG+Q +ELN
Sbjct: 465 AAMAAAVMNARSSAFAKRSLSF-----KPA----PVASNVSDWGSPNGKLEWGMQRDELN 515
Query: 270 KLRKSASFG-YRNNGNSVPT-----VDEPDVSWVNTLVKDAPGPSRPGPLGFEDXXXXXX 109
KLR+SASFG + NN NSV DEPDVSWVN+LVK+ P +
Sbjct: 516 KLRRSASFGIHGNNNNSVSRPARDYSDEPDVSWVNSLVKE------NAPERVNERVGNTV 569
Query: 108 CHLDNGDSEILPAWVEQMYLEQEQMV 31
+ D LP+W EQMY++ EQ +
Sbjct: 570 NGAASRDKFKLPSWAEQMYIDHEQQI 595
>TAIR9_protein||AT2G40140.2 | Symbols: CZF1, ZFAR1, SZF2, ATSZF2 | CZF1;
transcription factor | chr2:16772537-16774330 FORWARD
Length = 598
Score = 103 bits (255), Expect = 1e-022
Identities = 63/146 (43%), Positives = 85/146 (58%), Gaps = 21/146 (14%)
Frame = -1
Query: 450 SSRSAAFAKQRSQSFIERSANHNYGFSSPADSGTPKASNLSNWGSPSGKLDWGIQGEELN 271
++ +AA RS +F +RS + PA P ASN+S+WGSP+GKL+WG+Q +ELN
Sbjct: 465 AAMAAAVMNARSSAFAKRSLSF-----KPA----PVASNVSDWGSPNGKLEWGMQRDELN 515
Query: 270 KLRKSASFG-YRNNGNSVPT-----VDEPDVSWVNTLVKDAPGPSRPGPLGFEDXXXXXX 109
KLR+SASFG + NN NSV DEPDVSWVN+LVK+ P +
Sbjct: 516 KLRRSASFGIHGNNNNSVSRPARDYSDEPDVSWVNSLVKE------NAPERVNERVGNTV 569
Query: 108 CHLDNGDSEILPAWVEQMYLEQEQMV 31
+ D LP+W EQMY++ EQ +
Sbjct: 570 NGAASRDKFKLPSWAEQMYIDHEQQI 595
>TAIR9_protein||AT5G58620.1 | Symbols: | zinc finger (CCCH-type) family protein
| chr5:23693959-23695782 FORWARD
Length = 608
Score = 97 bits (239), Expect = 8e-021
Identities = 59/120 (49%), Positives = 75/120 (62%), Gaps = 15/120 (12%)
Frame = -1
Query: 465 AAAVLSSRSAAFAKQRSQSFIERS--ANHNYGFSSPADSGTPKASNLSNWGSPSGKLDWG 292
++AVL+SR+A FAKQRSQSFIER+ NH+ SS + L++WGS GKLDW
Sbjct: 484 SSAVLASRAAEFAKQRSQSFIERNNGLNHHPAISSMT------TTCLNDWGSLDGKLDWS 537
Query: 291 IQGEELNKLRKSASFGYRNNG------NSVPTVDEPDVSWVNTLVKDAPGPSRPGPLGFE 130
+QG+EL KLRKS SF R G N ++EPDVSWV LVK+ P +R P+ E
Sbjct: 538 VQGDELQKLRKSTSFRLRAGGMESRLPNEGTGLEEPDVSWVEPLVKE-PQETRLAPVWME 596
>TAIR9_protein||AT5G12850.1 | Symbols: | zinc finger (CCCH-type) family protein
| chr5:4057068-4059188 FORWARD
Length = 707
Score = 62 bits (149), Expect = 2e-010
Identities = 47/146 (32%), Positives = 71/146 (48%), Gaps = 28/146 (19%)
Frame = -1
Query: 429 AKQRSQSFIERSANHNYGFS-----SPADSGTPKASNLSNWGSPSG-KLDWGIQGEELNK 268
A+ + Q ++ ++G S P DSG+P S S+W G K+DW +Q +EL +
Sbjct: 572 ARMKQQLHSRSLSSRDFGSSLPRDLMPTDSGSP-LSPWSSWDQTHGSKVDWSVQSDELGR 630
Query: 267 LRKSASFGYRNNGNSVPTVDEPDVSWVNTLVKDAPGP-----------SRPGPLGFEDXX 121
LRKS S NN N E DVSW ++KD+ P +RP G
Sbjct: 631 LRKSHSLA--NNPNR-----EADVSWAQQMLKDSSSPRNGNRVVNMNGARPLTQG---GS 680
Query: 120 XXXXCHLDNGDSEILPAWVEQMYLEQ 43
+ D +S+IL AW+EQ++L++
Sbjct: 681 SVNPHNSDTRESDILDAWLEQLHLDR 706
>TAIR9_protein||AT2G41900.1 | Symbols: | zinc finger (CCCH-type) family protein
| chr2:17491352-17493502 FORWARD
Length = 717
Score = 59 bits (140), Expect = 2e-009
Identities = 31/70 (44%), Positives = 41/70 (58%), Gaps = 12/70 (17%)
Frame = -1
Query: 354 GTPKASNL--SNWGSPSGKLDWGIQGEELNKLRKSASFGYRNNGNSVPTVDEPDVSWVNT 181
G+P +N S WGS +G+ DWG+ E L KLR S+SF DEPDVSWV +
Sbjct: 612 GSPVNNNTWSSKWGSSNGQPDWGMSSEALGKLRSSSSF----------DGDEPDVSWVQS 661
Query: 180 LVKDAPGPSR 151
LVK+ P ++
Sbjct: 662 LVKETPAEAK 671
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 182,794,225
Number of Sequences: 33410
Number of Extensions: 182794225
Number of Successful Extensions: 15261447
Number of sequences better than 0.0: 0
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