BLASTX 7.6.2
Query= RU00603 /QuerySize=378
(377 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G02910.1 | Symbols: | FUNCTIONS IN: molecular... 121 1e-028
TAIR9_protein||AT5G46720.1 | Symbols: | FUNCTIONS IN: molecular... 115 8e-027
>TAIR9_protein||AT3G02910.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
Butirosin biosynthesis, BtrG-like (InterPro:IPR013024), AIG2-like
(InterPro:IPR009288); BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT5G46720.1); Has 210 Blast hits to 210 proteins
in 66 species: Archae - 2; Bacteria - 27; Metazoa - 122; Fungi - 0;
Plants - 41; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). |
chr3:649986-650549 FORWARD
Length = 188
Score = 121 bits (303), Expect = 1e-028
Identities = 57/99 (57%), Positives = 73/99 (73%)
Frame = -3
Query: 300 LIFSYGTLKRGFHNHKLTKELIDQDDAVFIGPYITLHTHPLVCGPHGLPYLINLPGSGHR 121
L+F+YGTLKRGF NH L ++LI DA F G Y TL +PLVCGP+ +P+L+N PGSG+
Sbjct: 13 LVFTYGTLKRGFSNHVLMQDLIRSGDASFKGVYQTLDKYPLVCGPYRVPFLLNKPGSGYH 72
Query: 120 IRGELYAVSTRGLARFDELECTSIGHYERLPVQLTVSAD 4
+ GELYAVS RGL+R DELE S GHY R P++L + +
Sbjct: 73 VNGELYAVSPRGLSRLDELEGISRGHYIRQPIRLAAAEE 111
>TAIR9_protein||AT5G46720.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s: Butirosin
biosynthesis, BtrG-like (InterPro:IPR013024), AIG2-like
(InterPro:IPR009288); BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT3G02910.1); Has 249 Blast hits to 249 proteins
in 85 species: Archae - 5; Bacteria - 65; Metazoa - 121; Fungi - 0;
Plants - 41; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). |
chr5:18959183-18959710 FORWARD
Length = 176
Score = 115 bits (287), Expect = 8e-027
Identities = 57/103 (55%), Positives = 71/103 (68%)
Frame = -3
Query: 312 SKPHLIFSYGTLKRGFHNHKLTKELIDQDDAVFIGPYITLHTHPLVCGPHGLPYLINLPG 133
S +LIF YGTLKR NH L ++LI +DAV+IG T +PLV G +G+PYLIN G
Sbjct: 4 SNKNLIFVYGTLKRNHRNHFLLEDLISTNDAVYIGQRTTRLQYPLVTGLYGIPYLINKSG 63
Query: 132 SGHRIRGELYAVSTRGLARFDELECTSIGHYERLPVQLTVSAD 4
SG +IRGELY+VS RGL R DELE + HYERLP+++ D
Sbjct: 64 SGQKIRGELYSVSKRGLVRLDELEGIKVNHYERLPIEVIEEDD 106
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 242,797,682
Number of Sequences: 33410
Number of Extensions: 242797682
Number of Successful Extensions: 20492288
Number of sequences better than 0.0: 0
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