BLASTX 7.6.2
Query= RU00654 /QuerySize=853
(852 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G44710.1 | Symbols: | FUNCTIONS IN: molecular... 125 5e-029
>TAIR9_protein||AT5G44710.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Ribosomal protein S27/S33, mitochondrial (InterPro:IPR013219); Has 56
Blast hits to 56 proteins in 30 species: Archae - 0; Bacteria - 0;
Metazoa - 6; Fungi - 30; Plants - 16; Viruses - 0; Other Eukaryotes - 4
(source: NCBI BLink). | chr5:18041621-18042322 FORWARD
Length = 103
Score = 125 bits (312), Expect = 5e-029
Identities = 58/81 (71%), Positives = 72/81 (88%)
Frame = -3
Query: 502 MASGSLKSILTAAVNTGVTEARARIFGHVLNPTGLKSAHKILRKKLIGEKVAQWYPHDIR 323
MASGSLKS++++AV GVTEARARIFGH+LNPTG +S HKILRKKLIG+KVA+WYP+DI+
Sbjct: 1 MASGSLKSLISSAVGRGVTEARARIFGHMLNPTGQRSPHKILRKKLIGDKVAEWYPYDIK 60
Query: 322 KDDPLIMEAEEKERTNKLEML 260
+DP ++ EEKER +KLEML
Sbjct: 61 NEDPNVLAREEKERISKLEML 81
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 242,797,682
Number of Sequences: 33410
Number of Extensions: 242797682
Number of Successful Extensions: 20492288
Number of sequences better than 0.0: 0
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