BLASTX 7.6.2
Query= RU00976 /QuerySize=639
(638 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G76880.1 | Symbols: | trihelix DNA-binding pr... 154 5e-038
TAIR9_protein||AT1G33240.1 | Symbols: AT-GTL1, AT-GTL2 | AT-GTL1... 153 1e-037
TAIR9_protein||AT1G76890.2 | Symbols: GT2, AT-GT2 | GT2; transcr... 142 3e-034
TAIR9_protein||AT5G28300.1 | Symbols: | trihelix DNA-binding pr... 99 2e-021
TAIR9_protein||AT3G10000.1 | Symbols: EDA31 | EDA31 (embryo sac ... 82 2e-016
TAIR9_protein||AT5G47660.1 | Symbols: | DNA-binding protein-rel... 81 4e-016
TAIR9_protein||AT5G03680.1 | Symbols: PTL | PTL (PETAL LOSS); tr... 78 3e-015
TAIR9_protein||AT5G63420.1 | Symbols: emb2746 | emb2746 (embryo ... 48 5e-006
>TAIR9_protein||AT1G76880.1 | Symbols: | trihelix DNA-binding protein, putative
| chr1:28865594-28867931 FORWARD
Length = 604
Score = 154 bits (388), Expect = 5e-038
Identities = 68/83 (81%), Positives = 78/83 (93%)
Frame = -3
Query: 636 ALIKLRSGLETRYQEAGPKGPLWEEISAGMQRMGYKRNPKRCKEKWENINKYFKKVKESN 457
ALIKLR+ L+++YQE GPKGPLWEEISAGM+R+G+ RN KRCKEKWENINKYFKKVKESN
Sbjct: 416 ALIKLRTNLDSKYQENGPKGPLWEEISAGMRRLGFNRNSKRCKEKWENINKYFKKVKESN 475
Query: 456 KARPEDAKTCPYFHELDALYRKR 388
K RPED+KTCPYFH+LDALYR+R
Sbjct: 476 KKRPEDSKTCPYFHQLDALYRER 498
Score = 80 bits (195), Expect = 1e-015
Identities = 38/79 (48%), Positives = 53/79 (67%), Gaps = 1/79 (1%)
Frame = -3
Query: 636 ALIKLRSGLETRYQEAGPKGPLWEEISAGMQRMGYKRNPKRCKEKWENINKYFKKVKESN 457
AL+K+RS + +++A KGPLWEE+S M GY RN K+CKEK+EN+ KY K+ KE
Sbjct: 69 ALLKIRSDMGIAFRDASVKGPLWEEVSRKMAEHGYIRNAKKCKEKFENVYKYHKRTKEGR 128
Query: 456 KARPEDAKTCPYFHELDAL 400
+ E KT +F +L+AL
Sbjct: 129 TGKSE-GKTYRFFDQLEAL 146
>TAIR9_protein||AT1G33240.1 | Symbols: AT-GTL1, AT-GTL2 | AT-GTL1 (GT2-LIKE 1);
DNA binding / transcription factor | chr1:12051859-12054320 REVERSE
Length = 670
Score = 153 bits (385), Expect = 1e-037
Identities = 79/160 (49%), Positives = 96/160 (60%), Gaps = 13/160 (8%)
Frame = -3
Query: 636 ALIKLRSGLETRYQEAGPKGPLWEEISAGMQRMGYKRNPKRCKEKWENINKYFKKVKESN 457
ALI LRSG+E RYQ+ PKG LWEEIS M+RMGY RN KRCKEKWENINKY+KKVKESN
Sbjct: 443 ALINLRSGMEPRYQDNVPKGLLWEEISTSMKRMGYNRNAKRCKEKWENINKYYKKVKESN 502
Query: 456 KARPEDAKTCPYFHELDALYRKRVXXXXXXXXXXXNQNIQQQPPATQGTVAASVPAPQTQ 277
K RP+DAKTCPYFH LD LYR +V Q+Q P T P +
Sbjct: 503 KKRPQDAKTCPYFHRLDLLYRNKVLGSGGGSSTSGLPQDQKQSPVT-------AMKPPQE 555
Query: 276 GTVAATDQSGNKSGDHSPNLQKNLFGDAPEEAAKKPEDIV 157
G V G+ S + ++++ + +KPED+V
Sbjct: 556 GLVNVQQTHGSASTEEEEPIEES------PQGTEKPEDLV 589
Score = 81 bits (198), Expect = 5e-016
Identities = 41/120 (34%), Positives = 65/120 (54%), Gaps = 1/120 (0%)
Frame = -3
Query: 636 ALIKLRSGLETRYQEAGPKGPLWEEISAGMQRMGYKRNPKRCKEKWENINKYFKKVKESN 457
AL+++RS +++ +++A K PLWE +S + +GYKR+ K+CKEK+EN+ KY+K+ KE+
Sbjct: 70 ALLRIRSDMDSTFRDATLKAPLWEHVSRKLLELGYKRSSKKCKEKFENVQKYYKRTKETR 129
Query: 456 KARPEDAKTCPYFHELDALYRKRVXXXXXXXXXXXNQNIQQQPPATQGTVAASVPAPQTQ 277
R D K +F +L+AL I ++ S P PQTQ
Sbjct: 130 GGR-HDGKAYKFFSQLEALNTTPPSSSLDVTPLSVANPILMPSSSSSPFPVFSQPQPQTQ 188
>TAIR9_protein||AT1G76890.2 | Symbols: GT2, AT-GT2 | GT2; transcription factor |
chr1:28873211-28875203 REVERSE
Length = 576
Score = 142 bits (356), Expect = 3e-034
Identities = 63/83 (75%), Positives = 72/83 (86%)
Frame = -3
Query: 636 ALIKLRSGLETRYQEAGPKGPLWEEISAGMQRMGYKRNPKRCKEKWENINKYFKKVKESN 457
ALI++R LE YQE G KGPLWEEISAGM+R+GY R+ KRCKEKWENINKYFKKVKESN
Sbjct: 405 ALIRIRKNLEANYQENGTKGPLWEEISAGMRRLGYNRSAKRCKEKWENINKYFKKVKESN 464
Query: 456 KARPEDAKTCPYFHELDALYRKR 388
K RP D+KTCPYFH+L+ALY +R
Sbjct: 465 KKRPLDSKTCPYFHQLEALYNER 487
Score = 79 bits (192), Expect = 3e-015
Identities = 36/78 (46%), Positives = 54/78 (69%), Gaps = 1/78 (1%)
Frame = -3
Query: 636 ALIKLRSGLETRYQEAGPKGPLWEEISAGMQRMGYKRNPKRCKEKWENINKYFKKVKESN 457
AL+++RS ++ ++++ K PLWEEIS M +GYKR+ K+CKEK+EN+ KY K+ KE
Sbjct: 49 ALLRIRSEMDKAFRDSTLKAPLWEEISRKMMELGYKRSSKKCKEKFENVYKYHKRTKEGR 108
Query: 456 KARPEDAKTCPYFHELDA 403
+ E KT +F EL+A
Sbjct: 109 TGKSE-GKTYRFFEELEA 125
>TAIR9_protein||AT5G28300.1 | Symbols: | trihelix DNA-binding protein, putative
| chr5:10292789-10295101 REVERSE
Length = 620
Score = 99 bits (245), Expect = 2e-021
Identities = 42/60 (70%), Positives = 49/60 (81%)
Frame = -3
Query: 576 PLWEEISAGMQRMGYKRNPKRCKEKWENINKYFKKVKESNKARPEDAKTCPYFHELDALY 397
PLWE IS M +GYKR+ KRCKEKWENINKYF+K K+ NK RP D++TCPYFH+L ALY
Sbjct: 497 PLWERISKKMLEIGYKRSAKRCKEKWENINKYFRKTKDVNKKRPLDSRTCPYFHQLTALY 556
>TAIR9_protein||AT3G10000.1 | Symbols: EDA31 | EDA31 (embryo sac development
arrest 31); transcription factor | chr3:3076874-3078907 FORWARD
Length = 482
Score = 82 bits (201), Expect = 2e-016
Identities = 36/80 (45%), Positives = 57/80 (71%), Gaps = 1/80 (1%)
Frame = -3
Query: 633 LIKLRSGLETRYQEAGPKGPLWEEISAGM-QRMGYKRNPKRCKEKWENINKYFKKVKESN 457
L+++RS L+ +++EA KGPLW+E+S M + GY R+ K+C+EK+EN+ KY+KK KE
Sbjct: 97 LLEVRSRLDHKFKEANQKGPLWDEVSRIMSEEHGYTRSGKKCREKFENLYKYYKKTKEGK 156
Query: 456 KARPEDAKTCPYFHELDALY 397
R +D K +F +L+A+Y
Sbjct: 157 SGRRQDGKNYRFFRQLEAIY 176
>TAIR9_protein||AT5G47660.1 | Symbols: | DNA-binding protein-related |
chr5:19313008-19314636 FORWARD
Length = 399
Score = 81 bits (199), Expect = 4e-016
Identities = 38/81 (46%), Positives = 55/81 (67%), Gaps = 2/81 (2%)
Frame = -3
Query: 636 ALIKLRSGLETRYQEAGPKGPLWEEISAGMQRMGYKRNPKRCKEKWENINKYFKKVKESN 457
ALI RS +E + KG +W+EISA M+ GY+R+ K+CKEKWEN+NKY+++V E
Sbjct: 311 ALISSRSDVEEK--TGINKGAIWDEISARMKERGYERSAKKCKEKWENMNKYYRRVTEGG 368
Query: 456 KARPEDAKTCPYFHELDALYR 394
+ +PE +KT YF +L Y+
Sbjct: 369 QKQPEHSKTRSYFEKLGNFYK 389
>TAIR9_protein||AT5G03680.1 | Symbols: PTL | PTL (PETAL LOSS); transcription
factor | chr5:957858-960760 FORWARD
Length = 592
Score = 78 bits (191), Expect = 3e-015
Identities = 37/80 (46%), Positives = 59/80 (73%), Gaps = 2/80 (2%)
Frame = -3
Query: 633 LIKLRSGLETRYQEAGPKGPLWEEISAGM-QRMGYKRNPKRCKEKWENINKYFKKVKESN 457
L+++RS L+ +++EA KGPLW+E+S M + GY+R+ K+C+EK+EN+ KY++K KE
Sbjct: 128 LLEIRSRLDHKFKEANQKGPLWDEVSRIMSEEHGYQRSGKKCREKFENLYKYYRKTKE-G 186
Query: 456 KARPEDAKTCPYFHELDALY 397
KA +D K +F +L+ALY
Sbjct: 187 KAGRQDGKHYRFFRQLEALY 206
>TAIR9_protein||AT5G63420.1 | Symbols: emb2746 | emb2746 (embryo defective
2746); DNA binding / catalytic/ hydrolase | chr5:25400515-25405807
FORWARD
Length = 912
Score = 48 bits (112), Expect = 5e-006
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 6/77 (7%)
Frame = -3
Query: 633 LIKLRSGLETRYQEAGPKGPLWEEISAGMQRMGYKRNPKRCKEKWEN-INKYFKKVKESN 457
+I++R L +R+Q + LWEEIS+ + G R+P +CK W + I KY E +
Sbjct: 829 VIRMRGELHSRFQVVKGRMALWEEISSNLSAEGINRSPGQCKSLWASLIQKY-----EES 883
Query: 456 KARPEDAKTCPYFHELD 406
KA + P+F +++
Sbjct: 884 KADERSKTSWPHFEDMN 900
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 390,802,586
Number of Sequences: 33410
Number of Extensions: 390802586
Number of Successful Extensions: 20688415
Number of sequences better than 0.0: 0
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