BLASTX 7.6.2
Query= RU01026 /QuerySize=1219
(1218 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G19130.1 | Symbols: ATRBP47B | ATRBP47B (RNA-b... 278 6e-075
TAIR9_protein||AT1G49600.1 | Symbols: ATRBP47A | ATRBP47A (Arabi... 276 2e-074
TAIR9_protein||AT1G47490.2 | Symbols: ATRBP47C | ATRBP47C (ARABI... 250 1e-066
TAIR9_protein||AT1G47490.1 | Symbols: ATRBP47C | ATRBP47C (ARABI... 250 1e-066
TAIR9_protein||AT1G47500.1 | Symbols: ATRBP47C' | ATRBP47C' (RNA... 248 5e-066
TAIR9_protein||AT5G19350.1 | Symbols: | RNA-binding protein 45 ... 247 2e-065
TAIR9_protein||AT5G19350.2 | Symbols: | RNA-binding protein 45 ... 247 2e-065
TAIR9_protein||AT1G11650.2 | Symbols: ATRBP45B, RBP45B | RNA-bin... 240 2e-063
TAIR9_protein||AT1G11650.1 | Symbols: ATRBP45B, RBP45B | RNA-bin... 240 2e-063
TAIR9_protein||AT5G54900.1 | Symbols: ATRBP45A | ATRBP45A (RNA-b... 235 6e-062
TAIR9_protein||AT4G27000.1 | Symbols: ATRBP45C | ATRBP45C; RNA b... 233 2e-061
TAIR9_protein||AT1G54080.2 | Symbols: UBP1A | oligouridylate-bin... 118 8e-027
TAIR9_protein||AT1G54080.1 | Symbols: UBP1A | oligouridylate-bin... 101 2e-021
TAIR9_protein||AT3G14100.1 | Symbols: | oligouridylate-binding ... 99 6e-021
TAIR9_protein||AT5G50250.1 | Symbols: | 31 kDa ribonucleoprotei... 83 4e-016
TAIR9_protein||AT4G24770.1 | Symbols: RBP31, ATRBP31, CP31, ATRB... 78 1e-014
TAIR9_protein||AT1G60000.1 | Symbols: | 29 kDa ribonucleoprotei... 72 6e-013
TAIR9_protein||AT3G04500.1 | Symbols: | RNA recognition motif (... 68 1e-011
TAIR9_protein||AT4G13850.1 | Symbols: ATGRP2, GR-RBP2, GRP2 | GR... 62 7e-010
TAIR9_protein||AT4G13850.2 | Symbols: ATGRP2 | GR-RBP2 (GLYCINE-... 62 7e-010
TAIR9_protein||AT4G13850.3 | Symbols: ATGRP2 | GR-RBP2 (GLYCINE-... 62 7e-010
TAIR9_protein||AT4G13850.4 | Symbols: ATGRP2 | GR-RBP2 (GLYCINE-... 62 7e-010
TAIR9_protein||AT3G23830.1 | Symbols: GR-RBP4, GRP4 | GRP4 (GLYC... 60 3e-009
TAIR9_protein||AT3G23830.2 | Symbols: GR-RBP4, GRP4 | GRP4 (GLYC... 60 3e-009
TAIR9_protein||AT2G35410.1 | Symbols: | 33 kDa ribonucleoprotei... 58 1e-008
TAIR9_protein||AT3G52380.1 | Symbols: CP33, PDE322 | CP33; RNA b... 57 2e-008
TAIR9_protein||AT2G21660.1 | Symbols: ATGRP7, CCR2, GR-RBP7, GRP... 55 1e-007
TAIR9_protein||AT2G21660.2 | Symbols: ATGRP7, CCR2 | CCR2 (COLD,... 55 1e-007
TAIR9_protein||AT3G53460.1 | Symbols: CP29 | CP29; RNA binding /... 53 4e-007
TAIR9_protein||AT3G53460.2 | Symbols: CP29 | CP29; RNA binding /... 53 4e-007
>TAIR9_protein||AT3G19130.1 | Symbols: ATRBP47B | ATRBP47B (RNA-binding protein
47B); RNA binding | chr3:6611398-6613823 REVERSE
Length = 436
Score = 278 bits (710), Expect = 6e-075
Identities = 128/182 (70%), Positives = 156/182 (85%), Gaps = 1/182 (0%)
Frame = +1
Query: 511 GPTDEVRTIWAGDLHHWMDEAYLHGCFAYTGQVSSVKVIRNKQTGQTEGYGFVEFYSREA 690
G D+V+T+W GDL HWMDE YLH CF++TG+VSSVKVIRNK T Q+EGYGFVEF SR A
Sbjct: 102 GSGDDVKTLWVGDLLHWMDETYLHSCFSHTGEVSSVKVIRNKLTSQSEGYGFVEFLSRAA 161
Query: 691 AEEVLQTYNGTPMPNTEQPFRLNWATFSAGDRRA-DTSSDLSIFVGDLATDVTDTMLQET 867
AEEVLQ Y+G+ MPN++QPFR+NWA+FS G++RA + DLS+FVGDL+ DVTD +L ET
Sbjct: 162 AEEVLQNYSGSVMPNSDQPFRINWASFSTGEKRAVENGPDLSVFVGDLSPDVTDVLLHET 221
Query: 868 FASRYTSVKGAKVVQDANTGRSKGYGFVRFGDENERTKAIVEMNGAYCSSRPMRIGVATP 1047
F+ RY SVK AKVV D+NTGRSKGYGFVRFGDENER++A+ EMNGAYCS+R MR+G+ATP
Sbjct: 222 FSDRYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRALTEMNGAYCSNRQMRVGIATP 281
Query: 1048 KK 1053
K+
Sbjct: 282 KR 283
>TAIR9_protein||AT1G49600.1 | Symbols: ATRBP47A | ATRBP47A (Arabidopsis thaliana
RNA-binding protein 47a); RNA binding | chr1:18357236-18360150 REVERSE
Length = 446
Score = 276 bits (705), Expect = 2e-074
Identities = 130/179 (72%), Positives = 154/179 (86%), Gaps = 1/179 (0%)
Frame = +1
Query: 520 DEVRTIWAGDLHHWMDEAYLHGCFAYTGQVSSVKVIRNKQTGQTEGYGFVEFYSREAAEE 699
D+V+T+W GDL HWMDE YLH CF++T +VSSVKVIRNKQT Q+EGYGFVEF SR AAEE
Sbjct: 116 DDVKTLWVGDLLHWMDETYLHTCFSHTNEVSSVKVIRNKQTCQSEGYGFVEFLSRSAAEE 175
Query: 700 VLQTYNGTPMPNTEQPFRLNWATFSAGDRRA-DTSSDLSIFVGDLATDVTDTMLQETFAS 876
LQ+++G MPN EQPFRLNWA+FS G++RA + DLSIFVGDLA DV+D +L ETFA
Sbjct: 176 ALQSFSGVTMPNAEQPFRLNWASFSTGEKRASENGPDLSIFVGDLAPDVSDAVLLETFAG 235
Query: 877 RYTSVKGAKVVQDANTGRSKGYGFVRFGDENERTKAIVEMNGAYCSSRPMRIGVATPKK 1053
RY SVKGAKVV D+NTGRSKGYGFVRFGDENER++A+ EMNGA+CSSR MR+G+ATPK+
Sbjct: 236 RYPSVKGAKVVIDSNTGRSKGYGFVRFGDENERSRAMTEMNGAFCSSRQMRVGIATPKR 294
>TAIR9_protein||AT1G47490.2 | Symbols: ATRBP47C | ATRBP47C (ARABIDOPSIS THALIANA
RNA-BINDING PROTEIN 47C); RNA binding | chr1:17424801-17426114 FORWARD
Length = 311
Score = 250 bits (638), Expect = 1e-066
Identities = 122/180 (67%), Positives = 145/180 (80%), Gaps = 3/180 (1%)
Frame = +1
Query: 523 EVRTIWAGDLHHWMDEAYLHGCFAY--TGQVSSVKVIRNKQTGQTEGYGFVEFYSREAAE 696
E +TIW GDLHHWMDEAYL+ FA ++ SVKVIRNK G +EGYGFVEF S + A+
Sbjct: 99 ENKTIWVGDLHHWMDEAYLNSSFASGDEREIVSVKVIRNKNNGLSEGYGFVEFESHDVAD 158
Query: 697 EVLQTYNGTPMPNTEQPFRLNWATFSAGDRRADTSS-DLSIFVGDLATDVTDTMLQETFA 873
+VL+ +NGT MPNT+QPFRLNWA+FS G++R + + DLSIFVGDL+ DV+D +L ETF+
Sbjct: 159 KVLREFNGTTMPNTDQPFRLNWASFSTGEKRLENNGPDLSIFVGDLSPDVSDNLLHETFS 218
Query: 874 SRYTSVKGAKVVQDANTGRSKGYGFVRFGDENERTKAIVEMNGAYCSSRPMRIGVATPKK 1053
+Y SVK AKVV DANTGRSKGYGFVRFGDENERTKA+ EMNG CSSR MRIG ATP+K
Sbjct: 219 EKYPSVKAAKVVLDANTGRSKGYGFVRFGDENERTKAMTEMNGVKCSSRAMRIGPATPRK 278
>TAIR9_protein||AT1G47490.1 | Symbols: ATRBP47C | ATRBP47C (ARABIDOPSIS THALIANA
RNA-BINDING PROTEIN 47C); RNA binding | chr1:17424801-17427182 FORWARD
Length = 433
Score = 250 bits (638), Expect = 1e-066
Identities = 122/180 (67%), Positives = 145/180 (80%), Gaps = 3/180 (1%)
Frame = +1
Query: 523 EVRTIWAGDLHHWMDEAYLHGCFAY--TGQVSSVKVIRNKQTGQTEGYGFVEFYSREAAE 696
E +TIW GDLHHWMDEAYL+ FA ++ SVKVIRNK G +EGYGFVEF S + A+
Sbjct: 99 ENKTIWVGDLHHWMDEAYLNSSFASGDEREIVSVKVIRNKNNGLSEGYGFVEFESHDVAD 158
Query: 697 EVLQTYNGTPMPNTEQPFRLNWATFSAGDRRADTSS-DLSIFVGDLATDVTDTMLQETFA 873
+VL+ +NGT MPNT+QPFRLNWA+FS G++R + + DLSIFVGDL+ DV+D +L ETF+
Sbjct: 159 KVLREFNGTTMPNTDQPFRLNWASFSTGEKRLENNGPDLSIFVGDLSPDVSDNLLHETFS 218
Query: 874 SRYTSVKGAKVVQDANTGRSKGYGFVRFGDENERTKAIVEMNGAYCSSRPMRIGVATPKK 1053
+Y SVK AKVV DANTGRSKGYGFVRFGDENERTKA+ EMNG CSSR MRIG ATP+K
Sbjct: 219 EKYPSVKAAKVVLDANTGRSKGYGFVRFGDENERTKAMTEMNGVKCSSRAMRIGPATPRK 278
>TAIR9_protein||AT1G47500.1 | Symbols: ATRBP47C' | ATRBP47C' (RNA-binding
protein 47C'); RNA binding | chr1:17432682-17434805 FORWARD
Length = 435
Score = 248 bits (633), Expect = 5e-066
Identities = 121/180 (67%), Positives = 144/180 (80%), Gaps = 3/180 (1%)
Frame = +1
Query: 523 EVRTIWAGDLHHWMDEAYLHGCF--AYTGQVSSVKVIRNKQTGQTEGYGFVEFYSREAAE 696
E +TIW GDL +WMDEAYL+ F A ++ S+KVIRNK G +EGYGFVEF S + A+
Sbjct: 101 ENKTIWVGDLQNWMDEAYLNSAFTSAEEREIVSLKVIRNKHNGSSEGYGFVEFESHDVAD 160
Query: 697 EVLQTYNGTPMPNTEQPFRLNWATFSAGDRRADTSS-DLSIFVGDLATDVTDTMLQETFA 873
+VLQ +NG PMPNT+QPFRLNWA+FS G++R + + DLSIFVGDLA DV+D +L ETF+
Sbjct: 161 KVLQEFNGAPMPNTDQPFRLNWASFSTGEKRLENNGPDLSIFVGDLAPDVSDALLHETFS 220
Query: 874 SRYTSVKGAKVVQDANTGRSKGYGFVRFGDENERTKAIVEMNGAYCSSRPMRIGVATPKK 1053
+Y SVK AKVV DANTGRSKGYGFVRFGDENERTKA+ EMNG CSSR MRIG ATP+K
Sbjct: 221 EKYPSVKAAKVVLDANTGRSKGYGFVRFGDENERTKAMTEMNGVKCSSRAMRIGPATPRK 280
>TAIR9_protein||AT5G19350.1 | Symbols: | RNA-binding protein 45 (RBP45),
putative | chr5:6518978-6521295 FORWARD
Length = 426
Score = 247 bits (628), Expect = 2e-065
Identities = 118/178 (66%), Positives = 140/178 (78%), Gaps = 1/178 (0%)
Frame = +1
Query: 520 DEVRTIWAGDLHHWMDEAYLHGCFAYTGQVSSVKVIRNKQTGQTEGYGFVEFYSREAAEE 699
+EVRT+W GDL +W+DE YL CF+ TG++ SVKVIRNK TGQ EGYGF+EF S AAE
Sbjct: 21 EEVRTLWIGDLQYWVDENYLTSCFSQTGELVSVKVIRNKITGQPEGYGFIEFISHAAAER 80
Query: 700 VLQTYNGTPMPNTEQPFRLNWATFSAGDRRADTSSDLSIFVGDLATDVTDTMLQETFASR 879
LQTYNGT MP TE FRLNWA+F +G ++ D D SIFVGDLA DVTD +LQETF
Sbjct: 81 TLQTYNGTQMPGTELTFRLNWASFGSG-QKVDAGPDHSIFVGDLAPDVTDYLLQETFRVH 139
Query: 880 YTSVKGAKVVQDANTGRSKGYGFVRFGDENERTKAIVEMNGAYCSSRPMRIGVATPKK 1053
Y+SV+GAKVV D +TGRSKGYGFV+F +E+ER +A+ EMNG YCS+RPMRI ATPKK
Sbjct: 140 YSSVRGAKVVTDPSTGRSKGYGFVKFAEESERNRAMAEMNGLYCSTRPMRISAATPKK 197
>TAIR9_protein||AT5G19350.2 | Symbols: | RNA-binding protein 45 (RBP45),
putative | chr5:6518978-6521295 FORWARD
Length = 422
Score = 247 bits (628), Expect = 2e-065
Identities = 118/178 (66%), Positives = 140/178 (78%), Gaps = 1/178 (0%)
Frame = +1
Query: 520 DEVRTIWAGDLHHWMDEAYLHGCFAYTGQVSSVKVIRNKQTGQTEGYGFVEFYSREAAEE 699
+EVRT+W GDL +W+DE YL CF+ TG++ SVKVIRNK TGQ EGYGF+EF S AAE
Sbjct: 21 EEVRTLWIGDLQYWVDENYLTSCFSQTGELVSVKVIRNKITGQPEGYGFIEFISHAAAER 80
Query: 700 VLQTYNGTPMPNTEQPFRLNWATFSAGDRRADTSSDLSIFVGDLATDVTDTMLQETFASR 879
LQTYNGT MP TE FRLNWA+F +G ++ D D SIFVGDLA DVTD +LQETF
Sbjct: 81 TLQTYNGTQMPGTELTFRLNWASFGSG-QKVDAGPDHSIFVGDLAPDVTDYLLQETFRVH 139
Query: 880 YTSVKGAKVVQDANTGRSKGYGFVRFGDENERTKAIVEMNGAYCSSRPMRIGVATPKK 1053
Y+SV+GAKVV D +TGRSKGYGFV+F +E+ER +A+ EMNG YCS+RPMRI ATPKK
Sbjct: 140 YSSVRGAKVVTDPSTGRSKGYGFVKFAEESERNRAMAEMNGLYCSTRPMRISAATPKK 197
>TAIR9_protein||AT1G11650.2 | Symbols: ATRBP45B, RBP45B | RNA-binding protein 45
(RBP45), putative | chr1:3914895-3917941 FORWARD
Length = 406
Score = 240 bits (610), Expect = 2e-063
Identities = 117/179 (65%), Positives = 142/179 (79%), Gaps = 2/179 (1%)
Frame = +1
Query: 520 DEVRTIWAGDLHHWMDEAYLHGCFAYTGQVSSVKVIRNKQTGQTEGYGFVEFYSREAAEE 699
DE+RT+W GDL +WMDE +L+GCFA+TG++ S KVIRNKQTGQ EGYGF+EF S AAE
Sbjct: 59 DEIRTLWIGDLQYWMDENFLYGCFAHTGEMVSAKVIRNKQTGQVEGYGFIEFASHAAAER 118
Query: 700 VLQTYNGTPMPN-TEQPFRLNWATFSAGDRRADTSSDLSIFVGDLATDVTDTMLQETFAS 876
VLQT+N P+P+ +Q FRLNWA+ S+GD+R D S D +IFVGDLA DVTD +L ETF +
Sbjct: 119 VLQTFNNAPIPSFPDQLFRLNWASLSSGDKR-DDSPDYTIFVGDLAADVTDYILLETFRA 177
Query: 877 RYTSVKGAKVVQDANTGRSKGYGFVRFGDENERTKAIVEMNGAYCSSRPMRIGVATPKK 1053
Y SVKGAKVV D TGR+KGYGFVRF DE+E+ +A+ EMNG CS+RPMRIG A KK
Sbjct: 178 SYPSVKGAKVVIDRVTGRTKGYGFVRFSDESEQIRAMTEMNGVPCSTRPMRIGPAASKK 236
>TAIR9_protein||AT1G11650.1 | Symbols: ATRBP45B, RBP45B | RNA-binding protein 45
(RBP45), putative | chr1:3914895-3917301 FORWARD
Length = 307
Score = 240 bits (610), Expect = 2e-063
Identities = 117/179 (65%), Positives = 142/179 (79%), Gaps = 2/179 (1%)
Frame = +1
Query: 520 DEVRTIWAGDLHHWMDEAYLHGCFAYTGQVSSVKVIRNKQTGQTEGYGFVEFYSREAAEE 699
DE+RT+W GDL +WMDE +L+GCFA+TG++ S KVIRNKQTGQ EGYGF+EF S AAE
Sbjct: 59 DEIRTLWIGDLQYWMDENFLYGCFAHTGEMVSAKVIRNKQTGQVEGYGFIEFASHAAAER 118
Query: 700 VLQTYNGTPMPN-TEQPFRLNWATFSAGDRRADTSSDLSIFVGDLATDVTDTMLQETFAS 876
VLQT+N P+P+ +Q FRLNWA+ S+GD+R D S D +IFVGDLA DVTD +L ETF +
Sbjct: 119 VLQTFNNAPIPSFPDQLFRLNWASLSSGDKR-DDSPDYTIFVGDLAADVTDYILLETFRA 177
Query: 877 RYTSVKGAKVVQDANTGRSKGYGFVRFGDENERTKAIVEMNGAYCSSRPMRIGVATPKK 1053
Y SVKGAKVV D TGR+KGYGFVRF DE+E+ +A+ EMNG CS+RPMRIG A KK
Sbjct: 178 SYPSVKGAKVVIDRVTGRTKGYGFVRFSDESEQIRAMTEMNGVPCSTRPMRIGPAASKK 236
>TAIR9_protein||AT5G54900.1 | Symbols: ATRBP45A | ATRBP45A (RNA-binding protein
45A); RNA binding | chr5:22295412-22298126 FORWARD
Length = 388
Score = 235 bits (598), Expect = 6e-062
Identities = 114/181 (62%), Positives = 135/181 (74%), Gaps = 1/181 (0%)
Frame = +1
Query: 511 GPTDEVRTIWAGDLHHWMDEAYLHGCFAYTGQVSSVKVIRNKQTGQTEGYGFVEFYSREA 690
G +V+++W GDL WMDE Y+ FA +G+ +S KVIRNK TGQ+EGYGF+EF S
Sbjct: 54 GSASDVKSLWIGDLQQWMDENYIMSVFAQSGEATSAKVIRNKLTGQSEGYGFIEFVSHSV 113
Query: 691 AEEVLQTYNGTPMPNTEQPFRLNWATFSAGDRRADTSS-DLSIFVGDLATDVTDTMLQET 867
AE VLQTYNG PMP+TEQ FRLNWA AG++R T D +IFVGDLA +VTD ML +T
Sbjct: 114 AERVLQTYNGAPMPSTEQTFRLNWAQAGAGEKRFQTEGPDHTIFVGDLAPEVTDYMLSDT 173
Query: 868 FASRYTSVKGAKVVQDANTGRSKGYGFVRFGDENERTKAIVEMNGAYCSSRPMRIGVATP 1047
F + Y SVKGAKVV D TGRSKGYGFVRF DENE+ +A+ EMNG YCS+RPMRIG A
Sbjct: 174 FKNVYGSVKGAKVVLDRTTGRSKGYGFVRFADENEQMRAMTEMNGQYCSTRPMRIGPAAN 233
Query: 1048 K 1050
K
Sbjct: 234 K 234
>TAIR9_protein||AT4G27000.1 | Symbols: ATRBP45C | ATRBP45C; RNA binding |
chr4:13554983-13557763 REVERSE
Length = 416
Score = 233 bits (593), Expect = 2e-061
Identities = 111/181 (61%), Positives = 132/181 (72%)
Frame = +1
Query: 511 GPTDEVRTIWAGDLHHWMDEAYLHGCFAYTGQVSSVKVIRNKQTGQTEGYGFVEFYSREA 690
G E+R++W GDL WMDE YL F TG+ ++ KVIRNKQ G +EGYGF+EF +
Sbjct: 74 GSAGEIRSLWIGDLQPWMDENYLMNVFGLTGEATAAKVIRNKQNGYSEGYGFIEFVNHAT 133
Query: 691 AEEVLQTYNGTPMPNTEQPFRLNWATFSAGDRRADTSSDLSIFVGDLATDVTDTMLQETF 870
AE LQTYNG PMP++EQ FRLNWA AG+RR + ++FVGDLA DVTD ML ETF
Sbjct: 134 AERNLQTYNGAPMPSSEQAFRLNWAQLGAGERRQAEGPEHTVFVGDLAPDVTDHMLTETF 193
Query: 871 ASRYTSVKGAKVVQDANTGRSKGYGFVRFGDENERTKAIVEMNGAYCSSRPMRIGVATPK 1050
+ Y+SVKGAKVV D TGRSKGYGFVRF DE+E+ +A+ EMNG YCSSRPMR G A K
Sbjct: 194 KAVYSSVKGAKVVNDRTTGRSKGYGFVRFADESEQIRAMTEMNGQYCSSRPMRTGPAANK 253
Query: 1051 K 1053
K
Sbjct: 254 K 254
>TAIR9_protein||AT1G54080.2 | Symbols: UBP1A | oligouridylate-binding protein,
putative | chr1:20183923-20186824 REVERSE
Length = 431
Score = 118 bits (295), Expect = 8e-027
Identities = 70/175 (40%), Positives = 104/175 (59%), Gaps = 11/175 (6%)
Frame = +1
Query: 529 RTIWAGDLHHWMDEAYLHGCFAYTGQVSSVKVIRNKQTGQTEGYGFVEFYSREAAEEVLQ 708
R+++AG++H + E L FA TG + S K+IR ++ YGFV ++ R A +
Sbjct: 63 RSVYAGNIHTQVTEILLQEIFASTGPIESCKLIRKDKS----SYGFVHYFDRRCASMAIM 118
Query: 709 TYNGTPMPNTEQPFRLNWATFSAGDRRADTSSDLSIFVGDLATDVTDTMLQETFA---SR 879
T NG + QP ++NWA A +R DTSS +IFVGDL+ +VTD L ++F+ S
Sbjct: 119 TLNGRHI--FGQPMKVNWA--YATGQREDTSSHFNIFVGDLSPEVTDAALFDSFSAFNSC 174
Query: 880 YTSVKGAKVVQDANTGRSKGYGFVRFGDENERTKAIVEMNGAYCSSRPMRIGVAT 1044
+ + A+V+ D TGRS+G+GFV F ++ + AI EMNG + SSR +R AT
Sbjct: 175 SSYYRDARVMWDQKTGRSRGFGFVSFRNQQDAQTAINEMNGKWVSSRQIRCNWAT 229
>TAIR9_protein||AT1G54080.1 | Symbols: UBP1A | oligouridylate-binding protein,
putative | chr1:20183923-20186824 REVERSE
Length = 427
Score = 101 bits (249), Expect = 2e-021
Identities = 57/129 (44%), Positives = 79/129 (61%), Gaps = 5/129 (3%)
Frame = +1
Query: 658 YGFVEFYSREAAEEVLQTYNGTPMPNTEQPFRLNWATFSAGDRRADTSSDLSIFVGDLAT 837
YGFV ++ R A + T NG + QP ++NWA A +R DTSS +IFVGDL+
Sbjct: 102 YGFVHYFDRRCASMAIMTLNGRHI--FGQPMKVNWA--YATGQREDTSSHFNIFVGDLSP 157
Query: 838 DVTDTMLQETFASRYTSVKGAKVVQDANTGRSKGYGFVRFGDENERTKAIVEMNGAYCSS 1017
+VTD L ++F S + S A+V+ D TGRS+G+GFV F ++ + AI EMNG + SS
Sbjct: 158 EVTDAALFDSF-SAFNSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAINEMNGKWVSS 216
Query: 1018 RPMRIGVAT 1044
R +R AT
Sbjct: 217 RQIRCNWAT 225
>TAIR9_protein||AT3G14100.1 | Symbols: | oligouridylate-binding protein,
putative | chr3:4673027-4675950 FORWARD
Length = 428
Score = 99 bits (244), Expect = 6e-021
Identities = 56/129 (43%), Positives = 81/129 (62%), Gaps = 5/129 (3%)
Frame = +1
Query: 658 YGFVEFYSREAAEEVLQTYNGTPMPNTEQPFRLNWATFSAGDRRADTSSDLSIFVGDLAT 837
YGFV ++ R +A + + NG + QP ++NWA A +R DTSS +IFVGDL+
Sbjct: 98 YGFVHYFDRRSAALAILSLNGRHL--FGQPIKVNWA--YATGQREDTSSHFNIFVGDLSP 153
Query: 838 DVTDTMLQETFASRYTSVKGAKVVQDANTGRSKGYGFVRFGDENERTKAIVEMNGAYCSS 1017
+VTD L ++F S ++S A+V+ D TGRS+G+GFV F ++ + AI EMNG + SS
Sbjct: 154 EVTDATLYQSF-SVFSSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAINEMNGKWLSS 212
Query: 1018 RPMRIGVAT 1044
R +R AT
Sbjct: 213 RQIRCNWAT 221
>TAIR9_protein||AT5G50250.1 | Symbols: | 31 kDa ribonucleoprotein, chloroplast,
putative / RNA-binding protein RNP-T, putative / RNA-binding protein
1/2/3, putative / RNA-binding protein cp31, putative |
chr5:20452677-20453965 REVERSE
Length = 290
Score = 83 bits (203), Expect = 4e-016
Identities = 55/177 (31%), Positives = 89/177 (50%), Gaps = 3/177 (1%)
Frame = +1
Query: 514 PTDEVRTIWAGDLHHWMDEAYLHGCFAYTGQVSSVKVIRNKQTGQTEGYGFVEFYSREAA 693
P +E + ++ G+L + +D L F G V +VI N+ T Q+ G+GFV + E A
Sbjct: 109 PPEEAK-LFVGNLPYDVDSQALAMLFEQAGTVEISEVIYNRDTDQSRGFGFVTMSTVEEA 167
Query: 694 EEVLQTYNGTPMPNTEQPFRLNWATFSAGDRRADT-SSDLSIFVGDLATDVTDTMLQETF 870
E+ ++ +N + S +R+ + I+VG+L DV L+ F
Sbjct: 168 EKAVEKFNSFEVNGRRLTVNRAAPRGSRPERQPRVYDAAFRIYVGNLPWDVDSGRLERLF 227
Query: 871 ASRYTSVKGAKVVQDANTGRSKGYGFVRFGDENERTKAIVEMNGAYCSSRPMRIGVA 1041
S + V A+VV D TGRS+G+GFV+ +ENE AI ++G R +++ VA
Sbjct: 228 -SEHGKVVDARVVSDRETGRSRGFGFVQMSNENEVNVAIAALDGQNLEGRAIKVNVA 283
>TAIR9_protein||AT4G24770.1 | Symbols: RBP31, ATRBP31, CP31, ATRBP33 | RBP31
(31-KDA RNA BINDING PROTEIN); RNA binding / poly(U) binding |
chr4:12766223-12767952 REVERSE
Length = 330
Score = 78 bits (190), Expect = 1e-014
Identities = 53/177 (29%), Positives = 89/177 (50%), Gaps = 3/177 (1%)
Frame = +1
Query: 514 PTDEVRTIWAGDLHHWMDEAYLHGCFAYTGQVSSVKVIRNKQTGQTEGYGFVEFYSREAA 693
P++E + ++ G+L + ++ L F G V +VI N++T Q+ G+GFV S + A
Sbjct: 146 PSEEAK-LFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEA 204
Query: 694 EEVLQTYNGTPMPNTEQPFRLNWATFSAGDRRADT-SSDLSIFVGDLATDVTDTMLQETF 870
E ++ +N + S +R ++VG+L DV + L++ F
Sbjct: 205 ETAVEKFNRYDLNGRLLTVNKAAPRGSRPERAPRVYEPAFRVYVGNLPWDVDNGRLEQLF 264
Query: 871 ASRYTSVKGAKVVQDANTGRSKGYGFVRFGDENERTKAIVEMNGAYCSSRPMRIGVA 1041
S + V A+VV D TGRS+G+GFV D +E +AI ++G R +R+ VA
Sbjct: 265 -SEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISALDGQNLEGRAIRVNVA 320
>TAIR9_protein||AT1G60000.1 | Symbols: | 29 kDa ribonucleoprotein, chloroplast,
putative / RNA-binding protein cp29, putative | chr1:22093678-22094540
REVERSE
Length = 259
Score = 72 bits (175), Expect = 6e-013
Identities = 53/184 (28%), Positives = 90/184 (48%), Gaps = 5/184 (2%)
Frame = +1
Query: 508 MGPTDEVRT-IWAGDLHHWMDEAYLHGCFAYTGQVSSVKVIRNKQTGQTEGYGFVEFYSR 684
+ P V T ++ G+L + +D A L V+V+ N+ TGQ+ G+ FV +
Sbjct: 77 LDPPAAVNTKLYFGNLPYNVDSATLAQIIQDFANPELVEVLYNRDTGQSRGFAFVTMSNV 136
Query: 685 EAAEEVLQTYNGTPMPNTEQPFRLNWATFSAGDRR-ADTSSDLSIFVGDLATDVTDTMLQ 861
E ++ +GT + ++N+A ++ ++ +FVG+L+ VT L
Sbjct: 137 EDCNIIIDNLDGTEY--LGRALKVNFADKPKPNKEPLYPETEHKLFVGNLSWTVTSESLA 194
Query: 862 ETFASRYTSVKGAKVVQDANTGRSKGYGFVRFGDENERTKAIVEMNGAYCSSRPMRIGVA 1041
F V GA+VV D +TGRS+GYGFV + + E A+ ++G R +R+ +A
Sbjct: 195 GAF-RECGDVVGARVVFDGDTGRSRGYGFVCYSSKAEMETALESLDGFELEGRAIRVNLA 253
Query: 1042 TPKK 1053
KK
Sbjct: 254 QGKK 257
>TAIR9_protein||AT3G04500.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr3:1212065-1213795 REVERSE
Length = 246
Score = 68 bits (164), Expect = 1e-011
Identities = 32/77 (41%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
Frame = +1
Query: 802 SDLSIFVGDLATDVTDTMLQETFASRYTSVKGAKVVQDANTGRSKGYGFVRFGDENERTK 981
+D +F GDL +V D +L + FA R+ + AKV++D TG++KGYGFV F + +
Sbjct: 135 NDYRLFCGDLGNEVNDDVLSKAFA-RFPTFNMAKVIRDKRTGKTKGYGFVSFLNPADLAA 193
Query: 982 AIVEMNGAYCSSRPMRI 1032
A+ EMNG Y +RP+++
Sbjct: 194 ALKEMNGKYVGNRPIKL 210
>TAIR9_protein||AT4G13850.1 | Symbols: ATGRP2, GR-RBP2, GRP2 | GR-RBP2
(GLYCINE-RICH RNA-BINDING PROTEIN 2); ATP binding / RNA binding /
double-stranded DNA binding / single-stranded DNA binding |
chr4:8021314-8022065 FORWARD
Length = 159
Score = 62 bits (149), Expect = 7e-010
Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Frame = +1
Query: 814 IFVGDLATDVTDTMLQETFASRYTSVKGAKVVQDANTGRSKGYGFVRFGDENERTKAIVE 993
+F+G L+ D L++ FA + V AKV+ D TGRS+G+GFV F DE T AI E
Sbjct: 37 LFIGGLSWGTDDASLRDAFA-HFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISE 95
Query: 994 MNGAYCSSRPMRIGVATPK 1050
M+G + R +R+ A +
Sbjct: 96 MDGKELNGRHIRVNPANDR 114
>TAIR9_protein||AT4G13850.2 | Symbols: ATGRP2 | GR-RBP2 (GLYCINE-RICH
RNA-BINDING PROTEIN 2); ATP binding / RNA binding / double-stranded DNA
binding / single-stranded DNA binding | chr4:8021314-8022065 FORWARD
Length = 154
Score = 62 bits (149), Expect = 7e-010
Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Frame = +1
Query: 814 IFVGDLATDVTDTMLQETFASRYTSVKGAKVVQDANTGRSKGYGFVRFGDENERTKAIVE 993
+F+G L+ D L++ FA + V AKV+ D TGRS+G+GFV F DE T AI E
Sbjct: 37 LFIGGLSWGTDDASLRDAFA-HFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISE 95
Query: 994 MNGAYCSSRPMRIGVATPK 1050
M+G + R +R+ A +
Sbjct: 96 MDGKELNGRHIRVNPANDR 114
>TAIR9_protein||AT4G13850.3 | Symbols: ATGRP2 | GR-RBP2 (GLYCINE-RICH
RNA-BINDING PROTEIN 2); ATP binding / RNA binding / double-stranded DNA
binding / single-stranded DNA binding | chr4:8021314-8022065 FORWARD
Length = 145
Score = 62 bits (149), Expect = 7e-010
Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Frame = +1
Query: 814 IFVGDLATDVTDTMLQETFASRYTSVKGAKVVQDANTGRSKGYGFVRFGDENERTKAIVE 993
+F+G L+ D L++ FA + V AKV+ D TGRS+G+GFV F DE T AI E
Sbjct: 37 LFIGGLSWGTDDASLRDAFA-HFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISE 95
Query: 994 MNGAYCSSRPMRIGVATPK 1050
M+G + R +R+ A +
Sbjct: 96 MDGKELNGRHIRVNPANDR 114
>TAIR9_protein||AT4G13850.4 | Symbols: ATGRP2 | GR-RBP2 (GLYCINE-RICH
RNA-BINDING PROTEIN 2); ATP binding / RNA binding / double-stranded DNA
binding / single-stranded DNA binding | chr4:8021314-8022065 FORWARD
Length = 130
Score = 62 bits (149), Expect = 7e-010
Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Frame = +1
Query: 814 IFVGDLATDVTDTMLQETFASRYTSVKGAKVVQDANTGRSKGYGFVRFGDENERTKAIVE 993
+F+G L+ D L++ FA + V AKV+ D TGRS+G+GFV F DE T AI E
Sbjct: 37 LFIGGLSWGTDDASLRDAFA-HFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISE 95
Query: 994 MNGAYCSSRPMRIGVATPK 1050
M+G + R +R+ A +
Sbjct: 96 MDGKELNGRHIRVNPANDR 114
>TAIR9_protein||AT3G23830.1 | Symbols: GR-RBP4, GRP4 | GRP4 (GLYCINE-RICH
RNA-BINDING PROTEIN 4); RNA binding / double-stranded DNA binding /
single-stranded DNA binding | chr3:8606762-8607677 REVERSE
Length = 137
Score = 60 bits (143), Expect = 3e-009
Identities = 31/79 (39%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Frame = +1
Query: 814 IFVGDLATDVTDTMLQETFASRYTSVKGAKVVQDANTGRSKGYGFVRFGDENERTKAIVE 993
+FVG L+ D+ L++ F S + V A V+ D TGRS+G+GFV F E+ AI E
Sbjct: 37 LFVGGLSWGTDDSSLKQAFTS-FGEVTEATVIADRETGRSRGFGFVSFSCEDSANNAIKE 95
Query: 994 MNGAYCSSRPMRIGVATPK 1050
M+G + R +R+ +AT +
Sbjct: 96 MDGKELNGRQIRVNLATER 114
>TAIR9_protein||AT3G23830.2 | Symbols: GR-RBP4, GRP4 | GRP4 (GLYCINE-RICH
RNA-BINDING PROTEIN 4); RNA binding / double-stranded DNA binding /
single-stranded DNA binding | chr3:8606762-8607677 REVERSE
Length = 137
Score = 60 bits (143), Expect = 3e-009
Identities = 31/79 (39%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Frame = +1
Query: 814 IFVGDLATDVTDTMLQETFASRYTSVKGAKVVQDANTGRSKGYGFVRFGDENERTKAIVE 993
+FVG L+ D+ L++ F S + V A V+ D TGRS+G+GFV F E+ AI E
Sbjct: 37 LFVGGLSWGTDDSSLKQAFTS-FGEVTEATVIADRETGRSRGFGFVSFSCEDSANNAIKE 95
Query: 994 MNGAYCSSRPMRIGVATPK 1050
M+G + R +R+ +AT +
Sbjct: 96 MDGKELNGRQIRVNLATER 114
>TAIR9_protein||AT2G35410.1 | Symbols: | 33 kDa ribonucleoprotein, chloroplast,
putative / RNA-binding protein cp33, putative | chr2:14898341-14899590
FORWARD
Length = 309
Score = 58 bits (138), Expect = 1e-008
Identities = 46/163 (28%), Positives = 71/163 (43%), Gaps = 24/163 (14%)
Frame = +1
Query: 589 FAYTGQVSSVKVIRNKQTGQTEGYGFVEFYSREAAEEVLQTYNGTPM------------- 729
F G V++V++IR K G+ G+ FV S E A+ + ++ +
Sbjct: 115 FGQCGTVNNVEIIRQKD-GKNRGFAFVTMASGEEAQAAIDKFDTFQVSGRIISVSFARRF 173
Query: 730 --PNTEQPFRLNWATFSAGDRRADTSSDLSIFVGDLATDVTDTMLQETFASRYTSVKGAK 903
P + P L + + GD R ++V +LA T L+E F + + A+
Sbjct: 174 KKPTPKSPNDL--PSPAPGDTRH------KLYVSNLAWKARSTHLRELFTAADFNPVSAR 225
Query: 904 VVQDANTGRSKGYGFVRFGDENERTKAIVEMNGAYCSSRPMRI 1032
VV GRS GYGFV F E AI ++NG RP+ +
Sbjct: 226 VVFADPEGRSSGYGFVSFATREEAENAITKLNGKEIMGRPITL 268
>TAIR9_protein||AT3G52380.1 | Symbols: CP33, PDE322 | CP33; RNA binding |
chr3:19421619-19422855 FORWARD
Length = 330
Score = 57 bits (137), Expect = 2e-008
Identities = 28/91 (30%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Frame = +1
Query: 781 DRRADTSSDLSIFVGDLATDVTDTMLQETFASRYTSVKGAKVVQDANTGRSKGYGFVRFG 960
+ R+ S ++ G+L ++T L++ F + V GAKV+ + NTGRS+G+GF+ F
Sbjct: 210 NNRSYVDSPHKVYAGNLGWNLTSQGLKDAFGDQ-PGVLGAKVIYERNTGRSRGFGFISFE 268
Query: 961 DENERTKAIVEMNGAYCSSRPMRIGVATPKK 1053
A+ MNG R +R+ +A+ ++
Sbjct: 269 SAENVQSALATMNGVEVEGRALRLNLASERE 299
>TAIR9_protein||AT2G21660.1 | Symbols: ATGRP7, CCR2, GR-RBP7, GRP7 | CCR2 (COLD,
CIRCADIAN RHYTHM, AND RNA BINDING 2); RNA binding / double-stranded DNA
binding / single-stranded DNA binding | chr2:9265477-9266316 REVERSE
Length = 177
Score = 55 bits (130), Expect = 1e-007
Identities = 31/75 (41%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Frame = +1
Query: 817 FVGDLATDVTDTMLQETFASRYTSVKGAKVVQDANTGRSKGYGFVRFGDENERTKAIVEM 996
FVG LA D L+ FA +Y V +K++ D TGRS+G+GFV F DE AI M
Sbjct: 11 FVGGLAWATDDRALETAFA-QYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIEGM 69
Query: 997 NGAYCSSRPMRIGVA 1041
NG R + + A
Sbjct: 70 NGQDLDGRSITVNEA 84
>TAIR9_protein||AT2G21660.2 | Symbols: ATGRP7, CCR2 | CCR2 (COLD, CIRCADIAN
RHYTHM, AND RNA BINDING 2); RNA binding / double-stranded DNA binding /
single-stranded DNA binding | chr2:9265477-9266316 REVERSE
Length = 160
Score = 55 bits (130), Expect = 1e-007
Identities = 31/75 (41%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Frame = +1
Query: 817 FVGDLATDVTDTMLQETFASRYTSVKGAKVVQDANTGRSKGYGFVRFGDENERTKAIVEM 996
FVG LA D L+ FA +Y V +K++ D TGRS+G+GFV F DE AI M
Sbjct: 11 FVGGLAWATDDRALETAFA-QYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIEGM 69
Query: 997 NGAYCSSRPMRIGVA 1041
NG R + + A
Sbjct: 70 NGQDLDGRSITVNEA 84
>TAIR9_protein||AT3G53460.1 | Symbols: CP29 | CP29; RNA binding / poly(U)
binding | chr3:19819738-19821423 REVERSE
Length = 343
Score = 53 bits (125), Expect = 4e-007
Identities = 29/76 (38%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Frame = +1
Query: 814 IFVGDLATDVTDTMLQETFASRYTSVKGAKVVQDANTGRSKGYGFVRFGDENERTKAIVE 993
++VG+L+ V D L+ F + V A+V+ D ++GRSKG+GFV E KAI
Sbjct: 259 LYVGNLSWGVDDMALENLF-NEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINS 317
Query: 994 MNGAYCSSRPMRIGVA 1041
+NGA R +R+ A
Sbjct: 318 LNGADLDGRQIRVSEA 333
>TAIR9_protein||AT3G53460.2 | Symbols: CP29 | CP29; RNA binding / poly(U)
binding | chr3:19819738-19821423 REVERSE
Length = 343
Score = 53 bits (125), Expect = 4e-007
Identities = 29/76 (38%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Frame = +1
Query: 814 IFVGDLATDVTDTMLQETFASRYTSVKGAKVVQDANTGRSKGYGFVRFGDENERTKAIVE 993
++VG+L+ V D L+ F + V A+V+ D ++GRSKG+GFV E KAI
Sbjct: 259 LYVGNLSWGVDDMALENLF-NEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINS 317
Query: 994 MNGAYCSSRPMRIGVA 1041
+NGA R +R+ A
Sbjct: 318 LNGADLDGRQIRVSEA 333
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 390,802,586
Number of Sequences: 33410
Number of Extensions: 390802586
Number of Successful Extensions: 20688415
Number of sequences better than 0.0: 0
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