BLASTX 7.6.2
Query= RU01197 /QuerySize=576
(575 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G12560.1 | Symbols: TRFL9, ATTBP2 | TRFL9 (TRF... 164 5e-041
TAIR9_protein||AT5G13820.1 | Symbols: TBP1, ATBP-1, ATBP1, ATTBP... 160 6e-040
TAIR9_protein||AT1G07540.1 | Symbols: TRFL2 | TRFL2 (TRF-LIKE 2)... 149 2e-036
TAIR9_protein||AT5G59430.1 | Symbols: ATTRP1, TRP1 | TRP1 (TELOM... 143 7e-035
TAIR9_protein||AT5G59430.2 | Symbols: ATTRP1 | TRP1 (TELOMERIC R... 143 7e-035
TAIR9_protein||AT5G59430.3 | Symbols: ATTRP1 | TRP1 (TELOMERIC R... 143 7e-035
TAIR9_protein||AT5G59430.4 | Symbols: ATTRP1 | TRP1 (TELOMERIC R... 143 7e-035
TAIR9_protein||AT3G46590.1 | Symbols: TRFL1, ATTRP2, TRP2 | TRFL... 143 1e-034
TAIR9_protein||AT3G46590.2 | Symbols: TRFL1, ATTRP2 | TRFL1 (TRF... 143 1e-034
TAIR9_protein||AT3G46590.3 | Symbols: TRFL1, ATTRP2 | TRFL1 (TRF... 143 1e-034
TAIR9_protein||AT3G53790.1 | Symbols: TRFL4 | TRFL4 (TRF-LIKE 4)... 129 1e-030
>TAIR9_protein||AT3G12560.1 | Symbols: TRFL9, ATTBP2 | TRFL9 (TRF-LIKE 9); DNA
bending/ DNA binding / telomeric DNA binding | chr3:3982272-3984848
REVERSE
Length = 620
Score = 164 bits (413), Expect = 5e-041
Identities = 78/116 (67%), Positives = 89/116 (76%)
Frame = -1
Query: 542 ECQAIVALPDMNMEPLAAVPVNQKSKRSELVQRRTRRPFXXXXXXXXXXXXXXXGTGRWR 363
+ + +V LP++ ++ LA VP+NQK KR+EL QRRTRRPF GTGRWR
Sbjct: 474 DSKELVPLPELEVKALAIVPLNQKPKRTELAQRRTRRPFSVTEVEALVQAVEELGTGRWR 533
Query: 362 DVKLCAFENADHRTYVDLKDKWKTLVHTAQISPQQRRGEPVPQELLDRVLAAHSYW 195
DVKL AFE+ADHRTYVDLKDKWKTLVHTA ISPQQRRGEPVPQELLDRVL A+ YW
Sbjct: 534 DVKLRAFEDADHRTYVDLKDKWKTLVHTASISPQQRRGEPVPQELLDRVLRAYGYW 589
>TAIR9_protein||AT5G13820.1 | Symbols: TBP1, ATBP-1, ATBP1, ATTBP1, HPPBF-1 |
TBP1 (TELOMERIC DNA BINDING PROTEIN 1); DNA binding / double-stranded
telomeric DNA binding | chr5:4461694-4464355 FORWARD
Length = 641
Score = 160 bits (404), Expect = 6e-040
Identities = 78/124 (62%), Positives = 88/124 (70%)
Frame = -1
Query: 566 PLTNKAMPECQAIVALPDMNMEPLAAVPVNQKSKRSELVQRRTRRPFXXXXXXXXXXXXX 387
P + + +A+V + + + LA VPVN+K KR+EL QRRTRRPF
Sbjct: 492 PADEQPSSDSRALVPVLALESDALALVPVNEKPKRTELSQRRTRRPFSVTEVEALVSAVE 551
Query: 386 XXGTGRWRDVKLCAFENADHRTYVDLKDKWKTLVHTAQISPQQRRGEPVPQELLDRVLAA 207
GTGRWRDVKL +FENA HRTYVDLKDKWKTLVHTA ISPQQRRGEPVPQELLDRVL A
Sbjct: 552 EVGTGRWRDVKLRSFENASHRTYVDLKDKWKTLVHTASISPQQRRGEPVPQELLDRVLGA 611
Query: 206 HSYW 195
H YW
Sbjct: 612 HRYW 615
>TAIR9_protein||AT1G07540.1 | Symbols: TRFL2 | TRFL2 (TRF-LIKE 2); DNA binding |
chr1:2318433-2321048 REVERSE
Length = 631
Score = 149 bits (374), Expect = 2e-036
Identities = 72/114 (63%), Positives = 85/114 (74%), Gaps = 1/114 (0%)
Frame = -1
Query: 536 QAIVALPDMNMEPLAAVPVNQKSKRSELVQRRTRRPFXXXXXXXXXXXXXXXGTGRWRDV 357
+A++ + ++ + L VP +K+KRSE+ QRR RRPF GTGRWRDV
Sbjct: 496 RALIPVSPLHAQALTVVP-PRKTKRSEVAQRRIRRPFSVAEVEALVQAVERLGTGRWRDV 554
Query: 356 KLCAFENADHRTYVDLKDKWKTLVHTAQISPQQRRGEPVPQELLDRVLAAHSYW 195
KL AF+NA HRTYVDLKDKWKTLVHTA+ISPQQRRGEPVPQELLDRVL AH+YW
Sbjct: 555 KLRAFDNAKHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLTAHAYW 608
>TAIR9_protein||AT5G59430.1 | Symbols: ATTRP1, TRP1 | TRP1 (TELOMERIC REPEAT
BINDING PROTEIN 1); DNA binding / double-stranded telomeric DNA binding
| chr5:23968254-23970695 FORWARD
Length = 579
Score = 143 bits (360), Expect = 7e-035
Identities = 73/126 (57%), Positives = 87/126 (69%), Gaps = 6/126 (4%)
Frame = -1
Query: 557 NKAMPECQAIVALPDMNMEPLAAVPVNQKSKRSE-----LVQRRTRRPFXXXXXXXXXXX 393
N + +A++++ +N + P ++KS+RSE QRR RRPF
Sbjct: 424 NNVTEDSKAMISVA-LNELSSQSQPPSRKSRRSEQQQQQAAQRRIRRPFSVAEVEALVQA 482
Query: 392 XXXXGTGRWRDVKLCAFENADHRTYVDLKDKWKTLVHTAQISPQQRRGEPVPQELLDRVL 213
GTGRWRDVKLCAFE+ADHRTYVDLKDKWKTLVHTA+ISPQQRRGEPVPQELL+RVL
Sbjct: 483 VEKLGTGRWRDVKLCAFEDADHRTYVDLKDKWKTLVHTAKISPQQRRGEPVPQELLNRVL 542
Query: 212 AAHSYW 195
AH YW
Sbjct: 543 NAHGYW 548
>TAIR9_protein||AT5G59430.2 | Symbols: ATTRP1 | TRP1 (TELOMERIC REPEAT BINDING
PROTEIN 1); DNA binding / double-stranded telomeric DNA binding |
chr5:23968254-23970695 FORWARD
Length = 579
Score = 143 bits (360), Expect = 7e-035
Identities = 73/126 (57%), Positives = 87/126 (69%), Gaps = 6/126 (4%)
Frame = -1
Query: 557 NKAMPECQAIVALPDMNMEPLAAVPVNQKSKRSE-----LVQRRTRRPFXXXXXXXXXXX 393
N + +A++++ +N + P ++KS+RSE QRR RRPF
Sbjct: 424 NNVTEDSKAMISVA-LNELSSQSQPPSRKSRRSEQQQQQAAQRRIRRPFSVAEVEALVQA 482
Query: 392 XXXXGTGRWRDVKLCAFENADHRTYVDLKDKWKTLVHTAQISPQQRRGEPVPQELLDRVL 213
GTGRWRDVKLCAFE+ADHRTYVDLKDKWKTLVHTA+ISPQQRRGEPVPQELL+RVL
Sbjct: 483 VEKLGTGRWRDVKLCAFEDADHRTYVDLKDKWKTLVHTAKISPQQRRGEPVPQELLNRVL 542
Query: 212 AAHSYW 195
AH YW
Sbjct: 543 NAHGYW 548
>TAIR9_protein||AT5G59430.3 | Symbols: ATTRP1 | TRP1 (TELOMERIC REPEAT BINDING
PROTEIN 1); DNA binding / double-stranded telomeric DNA binding |
chr5:23968254-23970753 FORWARD
Length = 569
Score = 143 bits (360), Expect = 7e-035
Identities = 73/126 (57%), Positives = 87/126 (69%), Gaps = 6/126 (4%)
Frame = -1
Query: 557 NKAMPECQAIVALPDMNMEPLAAVPVNQKSKRSE-----LVQRRTRRPFXXXXXXXXXXX 393
N + +A++++ +N + P ++KS+RSE QRR RRPF
Sbjct: 424 NNVTEDSKAMISVA-LNELSSQSQPPSRKSRRSEQQQQQAAQRRIRRPFSVAEVEALVQA 482
Query: 392 XXXXGTGRWRDVKLCAFENADHRTYVDLKDKWKTLVHTAQISPQQRRGEPVPQELLDRVL 213
GTGRWRDVKLCAFE+ADHRTYVDLKDKWKTLVHTA+ISPQQRRGEPVPQELL+RVL
Sbjct: 483 VEKLGTGRWRDVKLCAFEDADHRTYVDLKDKWKTLVHTAKISPQQRRGEPVPQELLNRVL 542
Query: 212 AAHSYW 195
AH YW
Sbjct: 543 NAHGYW 548
>TAIR9_protein||AT5G59430.4 | Symbols: ATTRP1 | TRP1 (TELOMERIC REPEAT BINDING
PROTEIN 1); DNA binding / double-stranded telomeric DNA binding |
chr5:23968254-23970695 FORWARD
Length = 578
Score = 143 bits (360), Expect = 7e-035
Identities = 73/126 (57%), Positives = 87/126 (69%), Gaps = 6/126 (4%)
Frame = -1
Query: 557 NKAMPECQAIVALPDMNMEPLAAVPVNQKSKRSE-----LVQRRTRRPFXXXXXXXXXXX 393
N + +A++++ +N + P ++KS+RSE QRR RRPF
Sbjct: 423 NNVTEDSKAMISVA-LNELSSQSQPPSRKSRRSEQQQQQAAQRRIRRPFSVAEVEALVQA 481
Query: 392 XXXXGTGRWRDVKLCAFENADHRTYVDLKDKWKTLVHTAQISPQQRRGEPVPQELLDRVL 213
GTGRWRDVKLCAFE+ADHRTYVDLKDKWKTLVHTA+ISPQQRRGEPVPQELL+RVL
Sbjct: 482 VEKLGTGRWRDVKLCAFEDADHRTYVDLKDKWKTLVHTAKISPQQRRGEPVPQELLNRVL 541
Query: 212 AAHSYW 195
AH YW
Sbjct: 542 NAHGYW 547
>TAIR9_protein||AT3G46590.1 | Symbols: TRFL1, ATTRP2, TRP2 | TRFL1 (TRF-LIKE 1);
DNA bending/ DNA binding / telomeric DNA binding |
chr3:17153642-17155946 FORWARD
Length = 553
Score = 143 bits (358), Expect = 1e-034
Identities = 72/112 (64%), Positives = 80/112 (71%), Gaps = 3/112 (2%)
Frame = -1
Query: 521 LPDMNMEPLAAVPVNQKSKRSE---LVQRRTRRPFXXXXXXXXXXXXXXXGTGRWRDVKL 351
+P + LA P N+K KR+E QRR RRPF GTGRWRDVK+
Sbjct: 421 IPVASAAMLAPRPPNRKFKRTEQQLAAQRRIRRPFSVTEVEALVQAVEKLGTGRWRDVKV 480
Query: 350 CAFENADHRTYVDLKDKWKTLVHTAQISPQQRRGEPVPQELLDRVLAAHSYW 195
AFE+ADHRTYVDLKDKWKTLVHTA+ISPQQRRGEPVPQELLDRVL AH+YW
Sbjct: 481 RAFEDADHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLKAHAYW 532
>TAIR9_protein||AT3G46590.2 | Symbols: TRFL1, ATTRP2 | TRFL1 (TRF-LIKE 1); DNA
bending/ DNA binding / telomeric DNA binding | chr3:17153642-17155946
FORWARD
Length = 554
Score = 143 bits (358), Expect = 1e-034
Identities = 72/112 (64%), Positives = 80/112 (71%), Gaps = 3/112 (2%)
Frame = -1
Query: 521 LPDMNMEPLAAVPVNQKSKRSE---LVQRRTRRPFXXXXXXXXXXXXXXXGTGRWRDVKL 351
+P + LA P N+K KR+E QRR RRPF GTGRWRDVK+
Sbjct: 422 IPVASAAMLAPRPPNRKFKRTEQQLAAQRRIRRPFSVTEVEALVQAVEKLGTGRWRDVKV 481
Query: 350 CAFENADHRTYVDLKDKWKTLVHTAQISPQQRRGEPVPQELLDRVLAAHSYW 195
AFE+ADHRTYVDLKDKWKTLVHTA+ISPQQRRGEPVPQELLDRVL AH+YW
Sbjct: 482 RAFEDADHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLKAHAYW 533
>TAIR9_protein||AT3G46590.3 | Symbols: TRFL1, ATTRP2 | TRFL1 (TRF-LIKE 1); DNA
bending/ DNA binding / telomeric DNA binding | chr3:17153642-17155946
FORWARD
Length = 548
Score = 143 bits (358), Expect = 1e-034
Identities = 72/112 (64%), Positives = 80/112 (71%), Gaps = 3/112 (2%)
Frame = -1
Query: 521 LPDMNMEPLAAVPVNQKSKRSE---LVQRRTRRPFXXXXXXXXXXXXXXXGTGRWRDVKL 351
+P + LA P N+K KR+E QRR RRPF GTGRWRDVK+
Sbjct: 416 IPVASAAMLAPRPPNRKFKRTEQQLAAQRRIRRPFSVTEVEALVQAVEKLGTGRWRDVKV 475
Query: 350 CAFENADHRTYVDLKDKWKTLVHTAQISPQQRRGEPVPQELLDRVLAAHSYW 195
AFE+ADHRTYVDLKDKWKTLVHTA+ISPQQRRGEPVPQELLDRVL AH+YW
Sbjct: 476 RAFEDADHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLKAHAYW 527
>TAIR9_protein||AT3G53790.1 | Symbols: TRFL4 | TRFL4 (TRF-LIKE 4); DNA binding |
chr3:19928478-19930267 FORWARD
Length = 401
Score = 129 bits (323), Expect = 1e-030
Identities = 63/101 (62%), Positives = 74/101 (73%), Gaps = 1/101 (0%)
Frame = -1
Query: 494 AAVPVNQK-SKRSELVQRRTRRPFXXXXXXXXXXXXXXXGTGRWRDVKLCAFENADHRTY 318
+ VPV K + + E+VQRR RRPF GTGRWRDVK AF + +HRTY
Sbjct: 295 SVVPVRMKPAWQPEMVQRRIRRPFTVSEVEALVQAVERLGTGRWRDVKSHAFNHVNHRTY 354
Query: 317 VDLKDKWKTLVHTAQISPQQRRGEPVPQELLDRVLAAHSYW 195
VDLKDKWKTLVHTA+IS +QRRGEPVPQ+LLDRVLAAH++W
Sbjct: 355 VDLKDKWKTLVHTAKISARQRRGEPVPQDLLDRVLAAHAFW 395
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 450,328,727
Number of Sequences: 33410
Number of Extensions: 450328727
Number of Successful Extensions: 25624131
Number of sequences better than 0.0: 0
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