BLASTX 7.6.2
Query= RU01199 /QuerySize=1300
(1299 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G02810.1 | Symbols: PRR7, APRR7 | PRR7 (PSEUDO... 315 6e-086
TAIR9_protein||AT5G60100.1 | Symbols: APRR3, PRR3 | APRR3 (ARABI... 233 2e-061
TAIR9_protein||AT5G24470.1 | Symbols: APRR5, PRR5 | APRR5 (ARABI... 170 2e-042
TAIR9_protein||AT2G46790.1 | Symbols: APRR9, PRR9, TL1 | APRR9 (... 168 1e-041
TAIR9_protein||AT5G61380.1 | Symbols: TOC1, APRR1, PRR1 | TOC1 (... 104 2e-022
TAIR9_protein||AT3G16857.1 | Symbols: ARR1 | ARR1 (ARABIDOPSIS R... 89 5e-018
TAIR9_protein||AT3G16857.2 | Symbols: ARR1 | ARR1 (ARABIDOPSIS R... 89 5e-018
TAIR9_protein||AT4G16110.1 | Symbols: ARR2 | ARR2 (ARABIDOPSIS R... 86 4e-017
TAIR9_protein||AT2G25180.1 | Symbols: ARR12 | ARR12 (ARABIDOPSIS... 84 2e-016
TAIR9_protein||AT1G67710.1 | Symbols: ARR11 | ARR11 (RESPONSE RE... 82 9e-016
TAIR9_protein||AT4G31920.1 | Symbols: ARR10 | ARR10 (ARABIDOPSIS... 82 9e-016
TAIR9_protein||AT2G01760.1 | Symbols: ARR14 | ARR14 (ARABIDOPSIS... 78 1e-014
TAIR9_protein||AT2G46790.2 | Symbols: APRR9, PRR9, TL1 | APRR9 (... 73 4e-013
TAIR9_protein||AT5G58080.1 | Symbols: ARR18 | ARR18 (ARABIDOPSIS... 70 3e-012
TAIR9_protein||AT1G59940.1 | Symbols: ARR3 | ARR3 (RESPONSE REGU... 68 1e-011
TAIR9_protein||AT1G10470.1 | Symbols: ARR4, MEE7, ATRR1, IBC7 | ... 66 5e-011
TAIR9_protein||AT3G62670.1 | Symbols: ARR20, MEE41 | ARR20 (ARAB... 66 5e-011
TAIR9_protein||AT1G68210.1 | Symbols: APRR6, PRR6 | APRR6 (PSEUD... 55 9e-008
TAIR9_protein||AT5G49240.1 | Symbols: APRR4, PRR4 | APRR4 (PSEUD... 50 2e-006
TAIR9_protein||AT4G18020.1 | Symbols: APRR2, PRR2 | APRR2; trans... 49 5e-006
TAIR9_protein||AT4G18020.2 | Symbols: APRR2, PRR2 | APRR2; trans... 49 5e-006
TAIR9_protein||AT4G18020.3 | Symbols: APRR2, PRR2 | APRR2; trans... 49 5e-006
TAIR9_protein||AT4G18020.4 | Symbols: APRR2, PRR2 | APRR2; trans... 49 5e-006
TAIR9_protein||AT4G18020.5 | Symbols: | APRR2; transcription fa... 49 5e-006
>TAIR9_protein||AT5G02810.1 | Symbols: PRR7, APRR7 | PRR7 (PSEUDO-RESPONSE
REGULATOR 7); transcription regulator/ two-component response regulator
| chr5:638283-641461 REVERSE
Length = 728
Score = 315 bits (805), Expect = 6e-086
Identities = 164/293 (55%), Positives = 197/293 (67%), Gaps = 5/293 (1%)
Frame = +1
Query: 4 REEEQGLVKGDDLKSNGRAEDVKVGNGGVGQPQFVIQQPQGSTVCWERFLHLRSLKVLLV 183
R E + ++ K+NG DV+ NG G Q + Q +TVCWERFLH+R+++VLLV
Sbjct: 26 RVESRTEKHSEEEKTNGITMDVR--NGSSGGLQIPLSQQTAATVCWERFLHVRTIRVLLV 83
Query: 184 EYDDCTRHIVAALLRNCSYEVIEAANGIQAWKVLEDLTNHVDLILTEVVMPCVSGISLLS 363
E DDCTR+IV ALLRNCSYEV+EA+NGIQAWKVLEDL NH+D++LTEV+MP +SGI LL
Sbjct: 84 ENDDCTRYIVTALLRNCSYEVVEASNGIQAWKVLEDLNNHIDIVLTEVIMPYLSGIGLLC 143
Query: 364 KIMSHKSRKNVPVIMMSSQDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRRCHXX 543
KI++HKSR+N+PVIMMSS DSMGLVFKCLSKGAVDFLVKPIRKNELK LWQHVWRRC
Sbjct: 144 KILNHKSRRNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKILWQHVWRRCQ-S 202
Query: 544 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGLNVGDGSDNGSGTQSSWTK 723
+GLN DGS +GSG QSSWTK
Sbjct: 203 SSGSGSESGTHQTQKSVKSKSIKKSDQDSGSSDENENGSIGLNASDGSSDGSGAQSSWTK 262
Query: 724 QAVEV-DSPRQVLSW-HPDSTCAQVVHSNAETFGKQLVTGAAARDCQQQKEEY 876
+AV+V DSPR V W DSTCAQVVHSN E QLV A ++ Q+ +++
Sbjct: 263 KAVDVDDSPRAVSLWDRVDSTCAQVVHSNPEFPSNQLVAPPAEKETQEHDDKF 315
>TAIR9_protein||AT5G60100.1 | Symbols: APRR3, PRR3 | APRR3 (ARABIDOPSIS
PSEUDO-RESPONSE REGULATOR 3); transcription regulator/ two-component
response regulator | chr5:24198215-24200502 REVERSE
Length = 496
Score = 233 bits (594), Expect = 2e-061
Identities = 138/294 (46%), Positives = 165/294 (56%), Gaps = 14/294 (4%)
Frame = +1
Query: 10 EEQGLVKGDDLKSNGRAEDV--KVGNGGVGQPQFVIQQPQGSTVCWERFLHLRSLKVLLV 183
E + V G + R ED N + Q Q QQP V WER+L +RSLKVLLV
Sbjct: 13 ETERQVFGSSEEDEFRVEDTARNTNNVQISQQQ---QQPLAHVVKWERYLPVRSLKVLLV 69
Query: 184 EYDDCTRHIVAALLRNCSYEVIEAANGIQAWKVLEDLTNHVDLILTEVVMPCVSGISLLS 363
E DD TRHIV ALL+NCSYEV + ++AW++LED + +DL+LTEV MP SG LLS
Sbjct: 70 ENDDSTRHIVTALLKNCSYEVTAVPDVLEAWRILEDEKSCIDLVLTEVDMPVHSGTGLLS 129
Query: 364 KIMSHKSRKNVPVIMMSSQDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRRCHXX 543
KIMSHK+ KN+PVIMMSS DSM LVFKCLS GAVDFLVKPIRKNELKNLWQHVWRRCH
Sbjct: 130 KIMSHKTLKNIPVIMMSSHDSMVLVFKCLSNGAVDFLVKPIRKNELKNLWQHVWRRCHSS 189
Query: 544 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMG--LNVGDGSDNGSGTQSSW 717
G N GSDNGSGTQSSW
Sbjct: 190 SGSGSESGIHDKKSVKPESTQGSENDASISDEHRNESGSSGGLSNQDGGSDNGSGTQSSW 249
Query: 718 TKQAVEVDSPRQVLSWHPDSTCAQVVHSNAETFGKQLVTGAAARDCQQQKEEYG 879
TK+A + S + PD+ + + N +L ++ + QKE+ G
Sbjct: 250 TKRASDTKS-TSPSNQFPDAPNKKGTYENGCAHVNRL------KEAEDQKEQIG 296
>TAIR9_protein||AT5G24470.1 | Symbols: APRR5, PRR5 | APRR5 (ARABIDOPSIS
PSEUDO-RESPONSE REGULATOR 5); transcription regulator/ two-component
response regulator | chr5:8356204-8358873 REVERSE
Length = 668
Score = 170 bits (429), Expect = 2e-042
Identities = 81/133 (60%), Positives = 103/133 (77%)
Frame = +1
Query: 133 VCWERFLHLRSLKVLLVEYDDCTRHIVAALLRNCSYEVIEAANGIQAWKVLEDLTNHVDL 312
V WERFL +L+VLLVE DD TR I+AALLR CSY V +G++AW++L+ VDL
Sbjct: 148 VKWERFLPKIALRVLLVEADDSTRQIIAALLRKCSYRVAAVPDGLKAWEMLKGKPESVDL 207
Query: 313 ILTEVVMPCVSGISLLSKIMSHKSRKNVPVIMMSSQDSMGLVFKCLSKGAVDFLVKPIRK 492
ILTEV +P +SG +LL+ IM H KN+PVIMMS+QDS+ V+KC+ KGA D+LVKP+R+
Sbjct: 208 ILTEVDLPSISGYALLTLIMEHDICKNIPVIMMSTQDSVNTVYKCMLKGAADYLVKPLRR 267
Query: 493 NELKNLWQHVWRR 531
NEL+NLWQHVWRR
Sbjct: 268 NELRNLWQHVWRR 280
>TAIR9_protein||AT2G46790.1 | Symbols: APRR9, PRR9, TL1 | APRR9 (ARABIDOPSIS
PSEUDO-RESPONSE REGULATOR 9); protein binding / transcription
regulator/ two-component response regulator | chr2:19232874-19234901
FORWARD
Length = 469
Score = 168 bits (423), Expect = 1e-041
Identities = 75/133 (56%), Positives = 107/133 (80%)
Frame = +1
Query: 133 VCWERFLHLRSLKVLLVEYDDCTRHIVAALLRNCSYEVIEAANGIQAWKVLEDLTNHVDL 312
V WE++L L+VLLVE D TR I+ ALLR C Y+V+ ++G+ AW+VL++ ++++DL
Sbjct: 26 VQWEKYLPKTVLRVLLVESDYSTRQIITALLRKCCYKVVAVSDGLAAWEVLKEKSHNIDL 85
Query: 313 ILTEVVMPCVSGISLLSKIMSHKSRKNVPVIMMSSQDSMGLVFKCLSKGAVDFLVKPIRK 492
ILTE+ +P +SG +LL+ +M H++ KN+PVIMMSSQDS+ +V KC+ +GA D+L+KP+RK
Sbjct: 86 ILTELDLPSISGFALLALVMEHEACKNIPVIMMSSQDSIKMVLKCMLRGAADYLIKPMRK 145
Query: 493 NELKNLWQHVWRR 531
NELKNLWQHVWRR
Sbjct: 146 NELKNLWQHVWRR 158
>TAIR9_protein||AT5G61380.1 | Symbols: TOC1, APRR1, PRR1 | TOC1 (TIMING OF CAB
EXPRESSION 1); transcription regulator/ two-component response
regulator | chr5:24675540-24678176 FORWARD
Length = 619
Score = 104 bits (257), Expect = 2e-022
Identities = 52/128 (40%), Positives = 73/128 (57%)
Frame = +1
Query: 148 FLHLRSLKVLLVEYDDCTRHIVAALLRNCSYEVIEAANGIQAWKVLEDLTNHVDLILTEV 327
F+ +++LL + D + V LL CSY+V + Q L +D+IL E+
Sbjct: 13 FIDRSRVRILLCDNDSTSLGEVFTLLSECSYQVTAVKSARQVIDALNAEGPDIDIILAEI 72
Query: 328 VMPCVSGISLLSKIMSHKSRKNVPVIMMSSQDSMGLVFKCLSKGAVDFLVKPIRKNELKN 507
+P G+ +L I K + +PVIMMS QD + +V KCL GA D+LVKP+R NEL N
Sbjct: 73 DLPMAKGMKMLRYITRDKDLRRIPVIMMSRQDEVPVVVKCLKLGAADYLVKPLRTNELLN 132
Query: 508 LWQHVWRR 531
LW H+WRR
Sbjct: 133 LWTHMWRR 140
>TAIR9_protein||AT3G16857.1 | Symbols: ARR1 | ARR1 (ARABIDOPSIS RESPONSE
REGULATOR 1); transcription factor/ two-component response regulator |
chr3:5756113-5758853 FORWARD
Length = 670
Score = 89 bits (219), Expect = 5e-018
Identities = 47/122 (38%), Positives = 73/122 (59%), Gaps = 3/122 (2%)
Frame = +1
Query: 166 LKVLLVEYDDCTRHIVAALLRNCSYEVIEAANGIQAWKVLEDLTNHVDLILTEVVMPCVS 345
L+VL+V+ D I+ +LR C YEV + A +L + D+++++V MP +
Sbjct: 37 LRVLVVDDDPTCLMILERMLRTCLYEVTKCNRAEMALSLLRKNKHGFDIVISDVHMPDMD 96
Query: 346 GISLLSKIMSHKSRKNVPVIMMSSQDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 525
G LL + ++PVIMMS+ DS +V K ++ GAVD+L+KP+R LKN+WQHV
Sbjct: 97 GFKLLEHV---GLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRMEALKNIWQHVV 153
Query: 526 RR 531
R+
Sbjct: 154 RK 155
>TAIR9_protein||AT3G16857.2 | Symbols: ARR1 | ARR1 (ARABIDOPSIS RESPONSE
REGULATOR 1); transcription factor/ two-component response regulator |
chr3:5756113-5759139 FORWARD
Length = 691
Score = 89 bits (219), Expect = 5e-018
Identities = 47/122 (38%), Positives = 73/122 (59%), Gaps = 3/122 (2%)
Frame = +1
Query: 166 LKVLLVEYDDCTRHIVAALLRNCSYEVIEAANGIQAWKVLEDLTNHVDLILTEVVMPCVS 345
L+VL+V+ D I+ +LR C YEV + A +L + D+++++V MP +
Sbjct: 37 LRVLVVDDDPTCLMILERMLRTCLYEVTKCNRAEMALSLLRKNKHGFDIVISDVHMPDMD 96
Query: 346 GISLLSKIMSHKSRKNVPVIMMSSQDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 525
G LL + ++PVIMMS+ DS +V K ++ GAVD+L+KP+R LKN+WQHV
Sbjct: 97 GFKLLEHV---GLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRMEALKNIWQHVV 153
Query: 526 RR 531
R+
Sbjct: 154 RK 155
>TAIR9_protein||AT4G16110.1 | Symbols: ARR2 | ARR2 (ARABIDOPSIS RESPONSE
REGULATOR 2); transcription factor/ two-component response regulator |
chr4:9112979-9115785 FORWARD
Length = 665
Score = 86 bits (212), Expect = 4e-017
Identities = 46/123 (37%), Positives = 72/123 (58%), Gaps = 3/123 (2%)
Frame = +1
Query: 163 SLKVLLVEYDDCTRHIVAALLRNCSYEVIEAANGIQAWKVLEDLTNHVDLILTEVVMPCV 342
+L+VL+V+ D I+ +L C Y V + A +L N D+++++V MP +
Sbjct: 27 NLRVLVVDDDPTCLMILERMLMTCLYRVTKCNRAESALSLLRKNKNGFDIVISDVHMPDM 86
Query: 343 SGISLLSKIMSHKSRKNVPVIMMSSQDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHV 522
G LL + ++PVIMMS+ DS +V K ++ GAVD+L+KP+R LKN+WQHV
Sbjct: 87 DGFKLLEHV---GLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRIEALKNIWQHV 143
Query: 523 WRR 531
R+
Sbjct: 144 VRK 146
>TAIR9_protein||AT2G25180.1 | Symbols: ARR12 | ARR12 (ARABIDOPSIS RESPONSE
REGULATOR 12); transcription factor/ two-component response regulator |
chr2:10724490-10726961 REVERSE
Length = 597
Score = 84 bits (206), Expect = 2e-016
Identities = 45/121 (37%), Positives = 71/121 (58%), Gaps = 3/121 (2%)
Frame = +1
Query: 166 LKVLLVEYDDCTRHIVAALLRNCSYEVIEAANGIQAWKVLEDLTNHVDLILTEVVMPCVS 345
++VL V+ D I+ +LLR+C Y V +A ++L + N DL++++V MP +
Sbjct: 17 MRVLAVDDDQTCLKILESLLRHCQYHVTTTNQAQKALELLRENKNKFDLVISDVDMPDMD 76
Query: 346 GISLLSKIMSHKSRKNVPVIMMSSQDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 525
G LL + ++PVIM+S+ V K ++ GA D+L+KP+R ELKN+WQHV
Sbjct: 77 GFKLLELV---GLEMDLPVIMLSAHSDPKYVMKGVTHGACDYLLKPVRIEELKNIWQHVV 133
Query: 526 R 528
R
Sbjct: 134 R 134
>TAIR9_protein||AT1G67710.1 | Symbols: ARR11 | ARR11 (RESPONSE REGULATOR 11);
transcription factor/ two-component response regulator |
chr1:25376994-25378905 REVERSE
Length = 522
Score = 82 bits (200), Expect = 9e-016
Identities = 45/122 (36%), Positives = 70/122 (57%), Gaps = 3/122 (2%)
Frame = +1
Query: 166 LKVLLVEYDDCTRHIVAALLRNCSYEVIEAANGIQAWKVLEDLTNHVDLILTEVVMPCVS 345
L+VL+V+ D I+ +L+ CSYEV +A ++L + + D+++++V MP +
Sbjct: 11 LRVLVVDDDPTWLKILEKMLKKCSYEVTTCGLAREALRLLRERKDGYDIVISDVNMPDMD 70
Query: 346 GISLLSKIMSHKSRKNVPVIMMSSQDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 525
G LL + ++PVIMMS V K + GA D+L+KPIR ELK +WQHV
Sbjct: 71 GFKLLEHV---GLELDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELKIIWQHVL 127
Query: 526 RR 531
R+
Sbjct: 128 RK 129
>TAIR9_protein||AT4G31920.1 | Symbols: ARR10 | ARR10 (ARABIDOPSIS RESPONSE
REGULATOR 10); transcription factor/ two-component response regulator |
chr4:15444290-15446766 REVERSE
Length = 553
Score = 82 bits (200), Expect = 9e-016
Identities = 44/122 (36%), Positives = 68/122 (55%), Gaps = 3/122 (2%)
Frame = +1
Query: 166 LKVLLVEYDDCTRHIVAALLRNCSYEVIEAANGIQAWKVLEDLTNHVDLILTEVVMPCVS 345
++VL V+ D I+ LL+ C Y V A ++L + N DL++++V MP +
Sbjct: 17 MRVLAVDDDQTCLRILQTLLQRCQYHVTTTNQAQTALELLRENKNKFDLVISDVDMPDMD 76
Query: 346 GISLLSKIMSHKSRKNVPVIMMSSQDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 525
G LL + ++PVIM+S+ V K + GA D+L+KP+R ELKN+WQHV
Sbjct: 77 GFKLLELV---GLEMDLPVIMLSAHSDPKYVMKGVKHGACDYLLKPVRIEELKNIWQHVV 133
Query: 526 RR 531
R+
Sbjct: 134 RK 135
>TAIR9_protein||AT2G01760.1 | Symbols: ARR14 | ARR14 (ARABIDOPSIS RESPONSE
REGULATOR 14); transcription factor/ two-component response regulator |
chr2:333041-334514 FORWARD
Length = 383
Score = 78 bits (190), Expect = 1e-014
Identities = 44/122 (36%), Positives = 70/122 (57%), Gaps = 2/122 (1%)
Frame = +1
Query: 166 LKVLLVEYDDCTRHIVAALLRNCSYEVIEAANGIQAWKVLEDLTNHVDLILTEVVMPCVS 345
L++L+V+ D I+ +L Y+V + A +L + + DL+L++V MP ++
Sbjct: 11 LRILVVDDDTSCLFILEKMLLRLMYQVTICSQADVALTILRERKDSFDLVLSDVHMPGMN 70
Query: 346 GISLLSKIMSHKSRKNVPVIMMSSQDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 525
G +LL ++ ++PVIMMS V ++ GA D+L+KPIR ELKN+WQHV
Sbjct: 71 GYNLLQQV--GLLEMDLPVIMMSVDGRTTTVMTGINHGACDYLIKPIRPEELKNIWQHVV 128
Query: 526 RR 531
RR
Sbjct: 129 RR 130
>TAIR9_protein||AT2G46790.2 | Symbols: APRR9, PRR9, TL1 | APRR9 (ARABIDOPSIS
PSEUDO-RESPONSE REGULATOR 9); protein binding / transcription
regulator/ two-component response regulator | chr2:19233422-19234901
FORWARD
Length = 352
Score = 73 bits (177), Expect = 4e-013
Identities = 30/41 (73%), Positives = 37/41 (90%)
Frame = +1
Query: 409 MSSQDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRR 531
MSSQDS+ +V KC+ +GA D+L+KP+RKNELKNLWQHVWRR
Sbjct: 1 MSSQDSIKMVLKCMLRGAADYLIKPMRKNELKNLWQHVWRR 41
>TAIR9_protein||AT5G58080.1 | Symbols: ARR18 | ARR18 (ARABIDOPSIS RESPONSE
REGULATOR 18); transcription factor/ two-component response regulator |
chr5:23501785-23504099 REVERSE
Length = 619
Score = 70 bits (170), Expect = 3e-012
Identities = 39/112 (34%), Positives = 62/112 (55%), Gaps = 5/112 (4%)
Frame = +1
Query: 196 CTRHIVAALLRNCSYEVIEAANGIQAWKVLEDLTNHVDLILTEVVMPCVSGISLLSKIMS 375
C R + LLR C Y V + +A ++L + +N DL++++V MP G LL +
Sbjct: 12 CLRKLEELLLR-CKYHVTKTMESRKALEMLRENSNMFDLVISDVEMPDTDGFKLLEIGL- 69
Query: 376 HKSRKNVPVIMMSSQDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRR 531
++PVIM+S+ V K + GA D+LVKP+ EL+N+W HV ++
Sbjct: 70 ---EMDLPVIMLSAHSDYDSVMKGIIHGACDYLVKPVGLKELQNIWHHVVKK 118
>TAIR9_protein||AT1G59940.1 | Symbols: ARR3 | ARR3 (RESPONSE REGULATOR 3);
transcription regulator/ two-component response regulator |
chr1:22065894-22066895 REVERSE
Length = 232
Score = 68 bits (164), Expect = 1e-011
Identities = 33/75 (44%), Positives = 51/75 (68%)
Frame = +1
Query: 304 VDLILTEVVMPCVSGISLLSKIMSHKSRKNVPVIMMSSQDSMGLVFKCLSKGAVDFLVKP 483
VDLI+T+ MP ++G LL KI S K VPV++MSS++ M + +CL +GA DFL+KP
Sbjct: 88 VDLIITDYCMPGMTGYELLKKIKESTSFKEVPVVIMSSENVMTRIDRCLEEGAEDFLLKP 147
Query: 484 IRKNELKNLWQHVWR 528
++ ++K L ++ R
Sbjct: 148 VKLADVKRLRSYLTR 162
>TAIR9_protein||AT1G10470.1 | Symbols: ARR4, MEE7, ATRR1, IBC7 | ARR4 (RESPONSE
REGULATOR 4); protein binding / transcription regulator/ two-component
response regulator | chr1:3442624-3443759 REVERSE
Length = 260
Score = 66 bits (159), Expect = 5e-011
Identities = 30/73 (41%), Positives = 50/73 (68%)
Frame = +1
Query: 304 VDLILTEVVMPCVSGISLLSKIMSHKSRKNVPVIMMSSQDSMGLVFKCLSKGAVDFLVKP 483
VDLI+T+ MP ++G LL KI + + VPV++MSS++ + + +CL +GA DFL+KP
Sbjct: 89 VDLIITDYCMPGMTGYELLKKIKESSNFREVPVVIMSSENVLTRIDRCLEEGAQDFLLKP 148
Query: 484 IRKNELKNLWQHV 522
++ ++K L H+
Sbjct: 149 VKLADVKRLRSHL 161
>TAIR9_protein||AT3G62670.1 | Symbols: ARR20, MEE41 | ARR20 (ARABIDOPSIS
RESPONSE REGULATOR 20); transcription factor/ two-component response
regulator | chr3:23176556-23178294 REVERSE
Length = 427
Score = 66 bits (159), Expect = 5e-011
Identities = 42/130 (32%), Positives = 73/130 (56%), Gaps = 6/130 (4%)
Frame = +1
Query: 142 ERFLHLRSLKVLLVEYDDCTRHIVAALLRNCSYEVIEAANGIQAWKVLEDLTNHVDLILT 321
E FL +S +VLLV D + + L+ SY+V + +G +A L + +DL++
Sbjct: 34 EEFL-TKSNRVLLVGAD--SNSSLKNLMTQYSYQVTKYESGEEAMAFLMKNKHEIDLVIW 90
Query: 322 EVVMPCVSGISLLSKIMSHKSRKNVPVIMMSSQDSMGLVFKCLSKGAVDFLVKPIRKNEL 501
+ MP ++G+ L+ I + ++PV++MS + V + + GA DFLVKP+ K +
Sbjct: 91 DFHMPDINGLDALNII---GKQMDLPVVIMSHEYKKETVMESIKYGACDFLVKPVSKEVI 147
Query: 502 KNLWQHVWRR 531
LW+HV+R+
Sbjct: 148 AVLWRHVYRK 157
>TAIR9_protein||AT1G68210.1 | Symbols: APRR6, PRR6 | APRR6 (PSEUDO-RESPONSE
REGULATOR 6); transcription regulator/ two-component response regulator
| chr1:25565983-25569302 FORWARD
Length = 756
Score = 55 bits (131), Expect = 9e-008
Identities = 30/122 (24%), Positives = 65/122 (53%), Gaps = 4/122 (3%)
Frame = +1
Query: 166 LKVLLVEYDDCTRHIVAALLRNCSYEVIEAANGIQAWKVLEDLTNHVDLILTEVVMPCVS 345
+ +LL+++D + + ++L+ S V+ +A ++E + LI+ + MP +
Sbjct: 13 ISILLIDHDTASIASLTSMLQQFSKRVMSVDVASKALSMIEKQKKEIGLIIANIEMPHID 72
Query: 346 GISLLSKIMSHKSRKNVPVIMMSSQDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 525
S L+ ++ K++P+I+++ + L+K A L KPI +++KN+WQHV+
Sbjct: 73 SHSFLNALL----LKDIPLILINPEIKTKEPSDLLTKRACFSLDKPISNDDIKNMWQHVF 128
Query: 526 RR 531
+
Sbjct: 129 SK 130
>TAIR9_protein||AT5G49240.1 | Symbols: APRR4, PRR4 | APRR4 (PSEUDO-RESPONSE
REGULATOR 4); transcription factor/ two-component response regulator |
chr5:19962934-19964351 FORWARD
Length = 293
Score = 50 bits (119), Expect = 2e-006
Identities = 35/122 (28%), Positives = 63/122 (51%), Gaps = 3/122 (2%)
Frame = +1
Query: 166 LKVLLVEYDDCTRHIVAALLRNCSYEVIEAANGIQAWKVLEDLTNHVDLILTEVVMPCVS 345
L+VL+ + D I+ L+ Y+V +A L + N DL + +V
Sbjct: 42 LRVLVFDEDPSYLLILERHLQKFQYQVTICNEVNKAMHTLRNHRNRFDLAMIQVNNAEGD 101
Query: 346 GISLLSKIMSHKSRKNVPVIMMSSQDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVW 525
LS+I S ++P+I++S DS+ V K + GA D+L+KPIR +L+ +++H+
Sbjct: 102 IFRFLSEI---GSEMDLPIIIISEDDSVKSVKKWMINGAADYLIKPIRPEDLRIVFKHLV 158
Query: 526 RR 531
++
Sbjct: 159 KK 160
>TAIR9_protein||AT4G18020.1 | Symbols: APRR2, PRR2 | APRR2; transcription
factor/ two-component response regulator | chr4:10003738-10006682
REVERSE
Length = 536
Score = 49 bits (116), Expect = 5e-006
Identities = 20/43 (46%), Positives = 30/43 (69%)
Frame = +1
Query: 394 VPVIMMSSQDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHV 522
+P IM+S+ + KC++ GAV+FL KP+ +LKN+WQHV
Sbjct: 96 LPTIMISTDHCITTTMKCIALGAVEFLQKPLSPEKLKNIWQHV 138
>TAIR9_protein||AT4G18020.2 | Symbols: APRR2, PRR2 | APRR2; transcription
factor/ two-component response regulator | chr4:10003738-10006682
REVERSE
Length = 536
Score = 49 bits (116), Expect = 5e-006
Identities = 20/43 (46%), Positives = 30/43 (69%)
Frame = +1
Query: 394 VPVIMMSSQDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHV 522
+P IM+S+ + KC++ GAV+FL KP+ +LKN+WQHV
Sbjct: 96 LPTIMISTDHCITTTMKCIALGAVEFLQKPLSPEKLKNIWQHV 138
>TAIR9_protein||AT4G18020.3 | Symbols: APRR2, PRR2 | APRR2; transcription
factor/ two-component response regulator | chr4:10003738-10006682
REVERSE
Length = 536
Score = 49 bits (116), Expect = 5e-006
Identities = 20/43 (46%), Positives = 30/43 (69%)
Frame = +1
Query: 394 VPVIMMSSQDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHV 522
+P IM+S+ + KC++ GAV+FL KP+ +LKN+WQHV
Sbjct: 96 LPTIMISTDHCITTTMKCIALGAVEFLQKPLSPEKLKNIWQHV 138
>TAIR9_protein||AT4G18020.4 | Symbols: APRR2, PRR2 | APRR2; transcription
factor/ two-component response regulator | chr4:10003991-10006682
REVERSE
Length = 488
Score = 49 bits (116), Expect = 5e-006
Identities = 20/43 (46%), Positives = 30/43 (69%)
Frame = +1
Query: 394 VPVIMMSSQDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHV 522
+P IM+S+ + KC++ GAV+FL KP+ +LKN+WQHV
Sbjct: 96 LPTIMISTDHCITTTMKCIALGAVEFLQKPLSPEKLKNIWQHV 138
>TAIR9_protein||AT4G18020.5 | Symbols: | APRR2; transcription factor/
two-component response regulator | chr4:10003991-10006682 REVERSE
Length = 488
Score = 49 bits (116), Expect = 5e-006
Identities = 20/43 (46%), Positives = 30/43 (69%)
Frame = +1
Query: 394 VPVIMMSSQDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHV 522
+P IM+S+ + KC++ GAV+FL KP+ +LKN+WQHV
Sbjct: 96 LPTIMISTDHCITTTMKCIALGAVEFLQKPLSPEKLKNIWQHV 138
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 450,328,727
Number of Sequences: 33410
Number of Extensions: 450328727
Number of Successful Extensions: 25624131
Number of sequences better than 0.0: 0
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