BLASTX 7.6.2
Query= RU01217 /QuerySize=1176
(1175 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G16780.1 | Symbols: ATHB-2, HAT4, ATHB2 | ATHB... 273 1e-073
TAIR9_protein||AT4G17460.1 | Symbols: HAT1 | HAT1; DNA binding /... 211 1e-054
TAIR9_protein||AT5G47370.1 | Symbols: HAT2 | HAT2; DNA binding /... 208 7e-054
TAIR9_protein||AT2G44910.1 | Symbols: ATHB4, ATHB-4 | ATHB4 (ARA... 206 2e-053
TAIR9_protein||AT3G60390.1 | Symbols: HAT3 | HAT3 (HOMEOBOX-LEUC... 204 1e-052
TAIR9_protein||AT5G06710.1 | Symbols: HAT14 | HAT14 (HOMEOBOX FR... 200 1e-051
TAIR9_protein||AT4G37790.1 | Symbols: HAT22 | HAT22; transcripti... 181 1e-045
TAIR9_protein||AT2G22800.1 | Symbols: HAT9 | HAT9; DNA binding /... 179 3e-045
TAIR9_protein||AT2G01430.1 | Symbols: ATHB17, ATHB-17 | ATHB17 (... 142 5e-034
TAIR9_protein||AT1G70920.1 | Symbols: ATHB18 | ATHB18 (Arabidops... 115 6e-026
TAIR9_protein||AT1G26960.1 | Symbols: AtHB23 | AtHB23 (ARABIDOPS... 81 1e-015
TAIR9_protein||AT1G69780.1 | Symbols: ATHB13 | ATHB13; DNA bindi... 79 6e-015
TAIR9_protein||AT5G15150.1 | Symbols: ATHB-3, HAT7, ATHB3 | ATHB... 74 2e-013
TAIR9_protein||AT3G01470.1 | Symbols: ATHB-1, ATHB1, HD-ZIP-1, H... 72 8e-013
TAIR9_protein||AT3G01220.1 | Symbols: ATHB20 | ATHB20 (ARABIDOPS... 70 3e-012
TAIR9_protein||AT5G03790.1 | Symbols: ATHB51, LMI1, HB51 | HB51;... 68 9e-012
TAIR9_protein||AT5G65310.1 | Symbols: ATHB5, ATHB-5 | ATHB5 (ARA... 68 9e-012
TAIR9_protein||AT5G65310.2 | Symbols: ATHB5, ATHB-5 | ATHB5 (ARA... 68 9e-012
TAIR9_protein||AT1G27050.1 | Symbols: ATHB54 | ATHB54 (ARABIDOPS... 68 1e-011
TAIR9_protein||AT4G40060.1 | Symbols: ATHB16, ATHB-16 | ATHB16 (... 67 1e-011
TAIR9_protein||AT2G22430.1 | Symbols: ATHB6 | ATHB6; DNA binding... 67 3e-011
TAIR9_protein||AT2G18550.1 | Symbols: HB-2, ATHB21 | HB-2 (HOMEO... 66 3e-011
TAIR9_protein||AT5G06710.2 | Symbols: HAT14 | HAT14 (HOMEOBOX FR... 65 7e-011
TAIR9_protein||AT2G46680.1 | Symbols: ATHB-7, ATHB7 | ATHB-7 (AR... 64 2e-010
TAIR9_protein||AT2G46680.2 | Symbols: ATHB-7, ATHB7 | ATHB-7 (AR... 63 3e-010
TAIR9_protein||AT4G36740.1 | Symbols: HB-5, ATHB40 | ATHB40 (ARA... 62 6e-010
TAIR9_protein||AT3G61890.1 | Symbols: ATHB-12, ATHB12 | ATHB-12 ... 60 2e-009
TAIR9_protein||AT1G79840.1 | Symbols: GL2 | GL2 (GLABRA 2); DNA ... 58 9e-009
TAIR9_protein||AT5G53980.1 | Symbols: ATHB52 | ATHB52 (ARABIDOPS... 55 8e-008
TAIR9_protein||AT5G66700.1 | Symbols: HB53, HB-8, ATHB53 | HB53;... 55 1e-007
>TAIR9_protein||AT4G16780.1 | Symbols: ATHB-2, HAT4, ATHB2 | ATHB-2 (ARABIDOPSIS
THALIANA HOMEOBOX PROTEIN 2); DNA binding / protein homodimerization/
sequence-specific DNA binding / transcription factor |
chr4:9449291-9450604 FORWARD
Length = 285
Score = 273 bits (698), Expect = 1e-073
Identities = 146/230 (63%), Positives = 166/230 (72%), Gaps = 12/230 (5%)
Frame = +2
Query: 2 TSSSSPHSGFNPQKPSWNDALASSDRNSDTCRAAARSFLRGIDVNRLPSTGDCED----X 169
T SSS F ++ SWN++ SS NSD+ + R+F+RGIDVNR PST + D
Sbjct: 32 TPSSSSFGLF--RRSSWNESFTSSVPNSDSSQKETRTFIRGIDVNRPPSTAEYGDEDAGV 89
Query: 170 XXXXXXXXXXXGKRSEREANGEDLDLERDGSRGMSDEEDGETSRKKLRLSKDQSAILEES 349
GKRSERE D + GSRG+SD+EDG+ SRKKLRLSKDQSAILEE+
Sbjct: 90 SSPNSTVSSSTGKRSEREE-----DTDPQGSRGISDDEDGDNSRKKLRLSKDQSAILEET 144
Query: 350 FKEHNTLNPXXXXXXXXXXGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEEN 529
FK+H+TLNP GLR RQVEVWFQNRRARTKLKQTEVDCEFL+RCCENLTEEN
Sbjct: 145 FKDHSTLNPKQKQALAKQLGLRARQVEVWFQNRRARTKLKQTEVDCEFLRRCCENLTEEN 204
Query: 530 RRLQKEVQELRALKLSPQFYMQMTPPTTLTMCPSCERVAVPPNSTPPSAT 679
RRLQKEV ELRALKLSPQFYM M+PPTTLTMCPSCE V+VPP P +AT
Sbjct: 205 RRLQKEVTELRALKLSPQFYMHMSPPTTLTMCPSCEHVSVPP-PQPQAAT 253
>TAIR9_protein||AT4G17460.1 | Symbols: HAT1 | HAT1; DNA binding / transcription
factor | chr4:9739862-9740983 FORWARD
Length = 283
Score = 211 bits (535), Expect = 1e-054
Identities = 108/149 (72%), Positives = 119/149 (79%), Gaps = 5/149 (3%)
Frame = +2
Query: 230 GEDLD--LERDGSRGMSDEED---GETSRKKLRLSKDQSAILEESFKEHNTLNPXXXXXX 394
G+DLD L+R SRG SDEE+ GET RKKLRLSKDQSA+LE++FKEHNTLNP
Sbjct: 106 GDDLDITLDRSSSRGTSDEEEDYGGETCRKKLRLSKDQSAVLEDTFKEHNTLNPKQKLAL 165
Query: 395 XXXXGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQELRALKL 574
GL RQVEVWFQNRRARTKLKQTEVDCE+LKRC E LTEENRRL+KE ELRALKL
Sbjct: 166 AKKLGLTARQVEVWFQNRRARTKLKQTEVDCEYLKRCVEKLTEENRRLEKEAAELRALKL 225
Query: 575 SPQFYMQMTPPTTLTMCPSCERVAVPPNS 661
SP+ Y QM+PPTTL MCPSCERVA P +S
Sbjct: 226 SPRLYGQMSPPTTLLMCPSCERVAGPSSS 254
>TAIR9_protein||AT5G47370.1 | Symbols: HAT2 | HAT2; DNA binding / transcription
factor/ transcription repressor | chr5:19216482-19217647 REVERSE
Length = 284
Score = 208 bits (528), Expect = 7e-054
Identities = 106/145 (73%), Positives = 114/145 (78%), Gaps = 2/145 (1%)
Frame = +2
Query: 233 EDLDLERDGSRGMSDEED--GETSRKKLRLSKDQSAILEESFKEHNTLNPXXXXXXXXXX 406
+++ +R SRG SDEE+ GETSRKKLRLSKDQSA LEE+FKEHNTLNP
Sbjct: 105 DEITPDRGYSRGTSDEEEDGGETSRKKLRLSKDQSAFLEETFKEHNTLNPKQKLALAKKL 164
Query: 407 GLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQELRALKLSPQF 586
L RQVEVWFQNRRARTKLKQTEVDCE+LKRC E LTEENRRLQKE ELR LKLSPQF
Sbjct: 165 NLTARQVEVWFQNRRARTKLKQTEVDCEYLKRCVEKLTEENRRLQKEAMELRTLKLSPQF 224
Query: 587 YMQMTPPTTLTMCPSCERVAVPPNS 661
Y QMTPPTTL MCPSCERV P +S
Sbjct: 225 YGQMTPPTTLIMCPSCERVGGPSSS 249
>TAIR9_protein||AT2G44910.1 | Symbols: ATHB4, ATHB-4 | ATHB4 (ARABIDOPSIS
THALIANA HOMEOBOX-LEUCINE ZIPPER PROTEIN 4); DNA binding /
transcription factor | chr2:18517887-18519525 REVERSE
Length = 319
Score = 206 bits (524), Expect = 2e-053
Identities = 104/149 (69%), Positives = 113/149 (75%), Gaps = 3/149 (2%)
Frame = +2
Query: 209 RSEREANGEDLDLERDGSRGMSDEED---GETSRKKLRLSKDQSAILEESFKEHNTLNPX 379
R E E R G G SD+ED G+ SRKKLRLSKDQ+ +LEE+FKEH+TLNP
Sbjct: 129 RGGDENEAERASCSRGGGSGGSDDEDGGNGDGSRKKLRLSKDQALVLEETFKEHSTLNPK 188
Query: 380 XXXXXXXXXGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQEL 559
LR RQVEVWFQNRRARTKLKQTEVDCE+LKRCC+NLTEENRRLQKEV EL
Sbjct: 189 QKLALAKQLNLRARQVEVWFQNRRARTKLKQTEVDCEYLKRCCDNLTEENRRLQKEVSEL 248
Query: 560 RALKLSPQFYMQMTPPTTLTMCPSCERVA 646
RALKLSP YM MTPPTTLTMCPSCERV+
Sbjct: 249 RALKLSPHLYMHMTPPTTLTMCPSCERVS 277
>TAIR9_protein||AT3G60390.1 | Symbols: HAT3 | HAT3 (HOMEOBOX-LEUCINE ZIPPER
PROTEIN 3); transcription factor | chr3:22320788-22322370 REVERSE
Length = 316
Score = 204 bits (517), Expect = 1e-052
Identities = 104/151 (68%), Positives = 118/151 (78%), Gaps = 7/151 (4%)
Frame = +2
Query: 233 EDLDLERDGSR--GMSDEEDG-----ETSRKKLRLSKDQSAILEESFKEHNTLNPXXXXX 391
ED ++ER G SD+EDG ++SRKKLRLSK+Q+ +LEE+FKEH+TLNP
Sbjct: 132 EDNEIERASCSLGGGSDDEDGSGNGDDSSRKKLRLSKEQALVLEETFKEHSTLNPKQKMA 191
Query: 392 XXXXXGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQELRALK 571
LR RQVEVWFQNRRARTKLKQTEVDCE+LKRCCENLT+ENRRLQKEV ELRALK
Sbjct: 192 LAKQLNLRTRQVEVWFQNRRARTKLKQTEVDCEYLKRCCENLTDENRRLQKEVSELRALK 251
Query: 572 LSPQFYMQMTPPTTLTMCPSCERVAVPPNST 664
LSP YM M PPTTLTMCPSCERVAV +S+
Sbjct: 252 LSPHLYMHMKPPTTLTMCPSCERVAVTSSSS 282
>TAIR9_protein||AT5G06710.1 | Symbols: HAT14 | HAT14 (HOMEOBOX FROM ARABIDOPSIS
THALIANA); DNA binding / transcription factor | chr5:2068305-2070284
REVERSE
Length = 337
Score = 200 bits (508), Expect = 1e-051
Identities = 105/158 (66%), Positives = 119/158 (75%), Gaps = 5/158 (3%)
Frame = +2
Query: 215 EREANGEDLD--LERDGSRGMSDEEDGE--TSRKKLRLSKDQSAILEESFKEHNTLNPXX 382
ER +N D+D +ER SR +++ D E ++RKKLRLSKDQSA LE+SFKEH+TLNP
Sbjct: 157 ERRSNKRDIDDEVERSASRASNEDNDDENGSTRKKLRLSKDQSAFLEDSFKEHSTLNPKQ 216
Query: 383 XXXXXXXXGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQELR 562
LRPRQVEVWFQNRRARTKLKQTEVDCE+LKRCCE+LTEENRRLQKEV+ELR
Sbjct: 217 KIALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCESLTEENRRLQKEVKELR 276
Query: 563 ALKLSPQFYMQMTPPTTLTMCPSCERVAVPPNSTPPSA 676
LK S FYMQ+ P TTLTMCPSCERVA SA
Sbjct: 277 TLKTSTPFYMQL-PATTLTMCPSCERVATSAAQPSTSA 313
>TAIR9_protein||AT4G37790.1 | Symbols: HAT22 | HAT22; transcription factor |
chr4:17768241-17769272 FORWARD
Length = 279
Score = 181 bits (457), Expect = 1e-045
Identities = 87/123 (70%), Positives = 102/123 (82%), Gaps = 1/123 (0%)
Frame = +2
Query: 275 DEEDGETSRKKLRLSKDQSAILEESFKEHNTLNPXXXXXXXXXXGLRPRQVEVWFQNRRA 454
D+E+G ++RKKLRL+K QSA+LE++FK H+TLNP LRPRQVEVWFQNRRA
Sbjct: 117 DDEEGVSARKKLRLTKQQSALLEDNFKLHSTLNPKQKQALARQLNLRPRQVEVWFQNRRA 176
Query: 455 RTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQELRALKLSPQFYMQMTPPTTLTMCPSC 634
RTKLKQTEVDCEFLK+CCE LT+ENRRLQKE+Q+L+ALKLS FYM M P TLTMCPSC
Sbjct: 177 RTKLKQTEVDCEFLKKCCETLTDENRRLQKELQDLKALKLSQPFYMHM-PAATLTMCPSC 235
Query: 635 ERV 643
ER+
Sbjct: 236 ERL 238
>TAIR9_protein||AT2G22800.1 | Symbols: HAT9 | HAT9; DNA binding / transcription
factor | chr2:9704949-9706048 REVERSE
Length = 275
Score = 179 bits (454), Expect = 3e-045
Identities = 94/167 (56%), Positives = 114/167 (68%), Gaps = 6/167 (3%)
Frame = +2
Query: 158 CEDXXXXXXXXXXXXGKRSEREANG--EDLDLERDGSRGMSD---EEDGETSRKKLRLSK 322
C G+ +RE +G E + E R +SD +E+G ++RKKLRL+K
Sbjct: 60 CRQTSSHSGVSSFSSGRVVKRERDGGEESPEEEEMTERVISDYHEDEEGISARKKLRLTK 119
Query: 323 DQSAILEESFKEHNTLNPXXXXXXXXXXGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKR 502
QSA+LEESFK+H+TLNP LRPRQVEVWFQNRRARTKLKQTEVDCEFLK+
Sbjct: 120 QQSALLEESFKDHSTLNPKQKQVLARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKK 179
Query: 503 CCENLTEENRRLQKEVQELRALKLSPQFYMQMTPPTTLTMCPSCERV 643
CCE L +EN RLQKE+QEL+ LKL+ FYM M P +TLT CPSCER+
Sbjct: 180 CCETLADENIRLQKEIQELKTLKLTQPFYMHM-PASTLTKCPSCERI 225
>TAIR9_protein||AT2G01430.1 | Symbols: ATHB17, ATHB-17 | ATHB17 (ARABIDOPSIS
THALIANA HOMEOBOX-LEUCINE ZIPPER PROTEIN 17); transcription factor |
chr2:187798-190369 REVERSE
Length = 276
Score = 142 bits (357), Expect = 5e-034
Identities = 76/161 (47%), Positives = 104/161 (64%), Gaps = 6/161 (3%)
Frame = +2
Query: 203 GKRSEREANGEDLDLERDGSRGMSDEEDGET-SRKKLRLSKDQSAILEESFKEHNTLNPX 379
G R + + L DG +DG RKKLRL+++QS +LE+SF++++TLNP
Sbjct: 105 GGRDQLRLDMNRLPSSEDGDDEEFSHDDGSAPPRKKLRLTREQSRLLEDSFRQNHTLNPK 164
Query: 380 XXXXXXXXXGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQEL 559
LRPRQ+EVWFQNRRAR+KLKQTE++CE+LKR +LTEEN RL +EV+EL
Sbjct: 165 QKEVLAKHLMLRPRQIEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEENHRLHREVEEL 224
Query: 560 RALKLSPQFYMQMTPPTTLTMCPSCERVAVPPNSTPPSATI 682
RA+K+ P + ++LTMCP CERV P ++P A +
Sbjct: 225 RAMKVGP---TTVNSASSLTMCPRCERVT--PAASPSRAVV 260
>TAIR9_protein||AT1G70920.1 | Symbols: ATHB18 | ATHB18 (Arabidopsis thaliana
homeobox-leucine zipper protein 18); DNA binding / transcription factor
| chr1:26736126-26738419 FORWARD
Length = 207
Score = 115 bits (287), Expect = 6e-026
Identities = 61/110 (55%), Positives = 75/110 (68%)
Frame = +2
Query: 275 DEEDGETSRKKLRLSKDQSAILEESFKEHNTLNPXXXXXXXXXXGLRPRQVEVWFQNRRA 454
D G RKKLRL+K+QS +LEESF +++TL P L RQVEVWFQNRRA
Sbjct: 60 DSNSGGRRRKKLRLTKEQSHLLEESFIQNHTLTPKQKKDLATFLKLSQRQVEVWFQNRRA 119
Query: 455 RTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQELRALKLSPQFYMQMTP 604
R+KLK TE++CE+LKR +L E+NRRLQ EV+ELRALK S + M P
Sbjct: 120 RSKLKHTEMECEYLKRWFGSLKEQNRRLQIEVEELRALKPSSTSALTMCP 169
>TAIR9_protein||AT1G26960.1 | Symbols: AtHB23 | AtHB23 (ARABIDOPSIS THALIANA
HOMEOBOX PROTEIN 23); DNA binding / transcription factor |
chr1:9356126-9357239 FORWARD
Length = 256
Score = 81 bits (199), Expect = 1e-015
Identities = 48/121 (39%), Positives = 67/121 (55%), Gaps = 1/121 (0%)
Frame = +2
Query: 203 GKRSEREANGEDLDLERDGSRGMSDEEDGETSRKKLRLSKDQSAILEESFKEHNTLNPXX 382
GKRS +L+ +G SD + + KK RL+ +Q LE+ F+ N L
Sbjct: 39 GKRSPMNNVQGFCNLDMNGDEEYSD-DGSKMGEKKRRLNMEQLKALEKDFELGNKLESDR 97
Query: 383 XXXXXXXXGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQELR 562
GL+PRQ+ +WFQNRRAR+K KQ E D + LKR E+L +EN LQ + Q+L+
Sbjct: 98 KLELARALGLQPRQIAIWFQNRRARSKTKQLEKDYDMLKRQFESLRDENEVLQTQNQKLQ 157
Query: 563 A 565
A
Sbjct: 158 A 158
>TAIR9_protein||AT1G69780.1 | Symbols: ATHB13 | ATHB13; DNA binding /
sequence-specific DNA binding / transcription factor |
chr1:26259166-26260465 FORWARD
Length = 295
Score = 79 bits (192), Expect = 6e-015
Identities = 49/126 (38%), Positives = 67/126 (53%), Gaps = 10/126 (7%)
Frame = +2
Query: 203 GKRSEREA-----NGEDLDLERDGSRGMSDEEDGETSRKKLRLSKDQSAILEESFKEHNT 367
GKRS E G +++ E D S ++ + KK RL+ +Q LE++F+ N
Sbjct: 52 GKRSPMEGCCDLETGNNMNGEEDYS-----DDGSQMGEKKRRLNMEQVKTLEKNFELGNK 106
Query: 368 LNPXXXXXXXXXXGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKE 547
L P GL+PRQ+ +WFQNRRAR K KQ E D + LKR + L EN LQ
Sbjct: 107 LEPERKMQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYDTLKRQFDTLKAENDLLQTH 166
Query: 548 VQELRA 565
Q+L+A
Sbjct: 167 NQKLQA 172
>TAIR9_protein||AT5G15150.1 | Symbols: ATHB-3, HAT7, ATHB3 | ATHB-3 (ARABIDOPSIS
THALIANA HOMEOBOX 3); DNA binding / sequence-specific DNA binding /
transcription factor | chr5:4913951-4915609 REVERSE
Length = 315
Score = 74 bits (180), Expect = 2e-013
Identities = 49/145 (33%), Positives = 69/145 (47%), Gaps = 7/145 (4%)
Frame = +2
Query: 131 VNRLPSTGDCEDXXXXXXXXXXXXGKRSEREANGEDLDLERDGSRGMSDEEDGETSRKKL 310
+NR S D ++++ GE+ +L DGS M E KK
Sbjct: 65 MNRSMSFTGVSDHHHLTQKSPTTTNNMNDQDQVGEEDNLSDDGSHMMLGE-------KKK 117
Query: 311 RLSKDQSAILEESFKEHNTLNPXXXXXXXXXXGLRPRQVEVWFQNRRARTKLKQTEVDCE 490
RL+ +Q LE+SF+ N L P GL+PRQ+ +WFQNRRAR K KQ E D +
Sbjct: 118 RLNLEQVRALEKSFELGNKLEPERKMQLAKALGLQPRQIAIWFQNRRARWKTKQLERDYD 177
Query: 491 FLKRCCENLTEENRRLQKEVQELRA 565
LK+ + L +N L ++L A
Sbjct: 178 SLKKQFDVLKSDNDSLLAHNKKLHA 202
>TAIR9_protein||AT3G01470.1 | Symbols: ATHB-1, ATHB1, HD-ZIP-1, HAT5 | ATHB-1
(ARABIDOPSIS THALIANA HOMEOBOX 1); DNA binding / protein
homodimerization/ sequence-specific DNA binding / transcription
activator/ transcription factor | chr3:182648-184034 REVERSE
Length = 273
Score = 72 bits (174), Expect = 8e-013
Identities = 42/102 (41%), Positives = 54/102 (52%), Gaps = 7/102 (6%)
Frame = +2
Query: 275 DEEDGETSRKKLRLSKDQSAILEESFKEHNTLNPXXXXXXXXXXGLRPRQVEVWFQNRRA 454
D D + KK RL+ +Q +LE+SF+ N L P GL+PRQV VWFQNRRA
Sbjct: 59 DFYDDQLPEKKRRLTTEQVHLLEKSFETENKLEPERKTQLAKKLGLQPRQVAVWFQNRRA 118
Query: 455 RTKLKQTEVDCEFLKRCCENLTE-------ENRRLQKEVQEL 559
R K KQ E D + LK + L +N +L+ EV L
Sbjct: 119 RWKTKQLERDYDLLKSTYDQLLSNYDSIVMDNDKLRSEVTSL 160
>TAIR9_protein||AT3G01220.1 | Symbols: ATHB20 | ATHB20 (ARABIDOPSIS THALIANA
HOMEOBOX PROTEIN 20); DNA binding / transcription factor |
chr3:73599-75295 FORWARD
Length = 287
Score = 70 bits (169), Expect = 3e-012
Identities = 44/117 (37%), Positives = 63/117 (53%), Gaps = 11/117 (9%)
Frame = +2
Query: 233 EDLDLERDGSRGMSDEEDGETSRKKLRLSKDQSAILEESFKEHNTLNPXXXXXXXXXXGL 412
++ +L DG+ M E KK RL +Q LE+SF+ N L P G+
Sbjct: 71 DEENLSDDGAHTMLGE-------KKKRLQLEQVKALEKSFELGNKLEPERKIQLAKALGM 123
Query: 413 RPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRL----QKEVQELRALK 571
+PRQ+ +WFQNRRAR K +Q E D + LK+ E+L +N L +K + E+ ALK
Sbjct: 124 QPRQIAIWFQNRRARWKTRQLERDYDSLKKQFESLKSDNASLLAYNKKLLAEVMALK 180
>TAIR9_protein||AT5G03790.1 | Symbols: ATHB51, LMI1, HB51 | HB51; DNA binding /
sequence-specific DNA binding / transcription factor |
chr5:1004985-1006373 FORWARD
Length = 236
Score = 68 bits (165), Expect = 9e-012
Identities = 39/89 (43%), Positives = 53/89 (59%)
Frame = +2
Query: 302 KKLRLSKDQSAILEESFKEHNTLNPXXXXXXXXXXGLRPRQVEVWFQNRRARTKLKQTEV 481
KK RL+ Q A LE SF+E L+ GL+PRQ+ VWFQNRRAR K KQ E
Sbjct: 77 KKKRLTSGQLASLERSFQEEIKLDSDRKVKLSRELGLQPRQIAVWFQNRRARWKAKQLEQ 136
Query: 482 DCEFLKRCCENLTEENRRLQKEVQELRAL 568
+ L++ + ++ E + L EV++LRAL
Sbjct: 137 LYDSLRQEYDVVSREKQMLHDEVKKLRAL 165
>TAIR9_protein||AT5G65310.1 | Symbols: ATHB5, ATHB-5 | ATHB5 (ARABIDOPSIS
THALIANA HOMEOBOX PROTEIN 5); protein homodimerization/
sequence-specific DNA binding / transcription activator/ transcription
factor | chr5:26102457-26104217 REVERSE
Length = 313
Score = 68 bits (165), Expect = 9e-012
Identities = 45/117 (38%), Positives = 60/117 (51%), Gaps = 10/117 (8%)
Frame = +2
Query: 245 LERDGS---RGMSDEEDGETSRKKLRLSKDQSAILEESFKEHNTLNPXXXXXXXXXXGLR 415
LE DGS G + KK RL +Q LE++F+ N L P GL+
Sbjct: 50 LEDDGSLEDLGGVGHASSTAAEKKRRLGVEQVKALEKNFEIDNKLEPERKVKLAQELGLQ 109
Query: 416 PRQVEVWFQNRRARTKLKQTEVD-------CEFLKRCCENLTEENRRLQKEVQELRA 565
PRQV +WFQNRRAR K KQ E D + LKR ++L +N L +++EL+A
Sbjct: 110 PRQVAIWFQNRRARWKTKQLERDYGVLKSNFDALKRNRDSLQRDNDSLLGQIKELKA 166
>TAIR9_protein||AT5G65310.2 | Symbols: ATHB5, ATHB-5 | ATHB5 (ARABIDOPSIS
THALIANA HOMEOBOX PROTEIN 5); protein homodimerization/
sequence-specific DNA binding / transcription activator/ transcription
factor | chr5:26102457-26103854 REVERSE
Length = 295
Score = 68 bits (165), Expect = 9e-012
Identities = 45/117 (38%), Positives = 60/117 (51%), Gaps = 10/117 (8%)
Frame = +2
Query: 245 LERDGS---RGMSDEEDGETSRKKLRLSKDQSAILEESFKEHNTLNPXXXXXXXXXXGLR 415
LE DGS G + KK RL +Q LE++F+ N L P GL+
Sbjct: 32 LEDDGSLEDLGGVGHASSTAAEKKRRLGVEQVKALEKNFEIDNKLEPERKVKLAQELGLQ 91
Query: 416 PRQVEVWFQNRRARTKLKQTEVD-------CEFLKRCCENLTEENRRLQKEVQELRA 565
PRQV +WFQNRRAR K KQ E D + LKR ++L +N L +++EL+A
Sbjct: 92 PRQVAIWFQNRRARWKTKQLERDYGVLKSNFDALKRNRDSLQRDNDSLLGQIKELKA 148
>TAIR9_protein||AT1G27050.1 | Symbols: ATHB54 | ATHB54 (ARABIDOPSIS THALIANA
HOMEOBOX PROTEIN 54); nucleic acid binding / transcription factor |
chr1:9391893-9394408 FORWARD
Length = 496
Score = 68 bits (164), Expect = 1e-011
Identities = 41/96 (42%), Positives = 51/96 (53%), Gaps = 7/96 (7%)
Frame = +2
Query: 302 KKLRLSKDQSAILEESFKEHNTLNPXXXXXXXXXXGLRPRQVEVWFQNRRARTKLKQTEV 481
KK +L+ Q +LEESF+E L P GL+P QV VWFQNRRAR K KQ E
Sbjct: 68 KKRKLTPIQLRLLEESFEEEKRLEPDRKLWLAEKLGLQPSQVAVWFQNRRARYKTKQLEH 127
Query: 482 DCEFLKRCCENLTE-------ENRRLQKEVQELRAL 568
DC+ LK L +N+ L+ +VQ L L
Sbjct: 128 DCDSLKASYAKLKTDWDILFVQNQTLKSKVQFLNRL 163
>TAIR9_protein||AT4G40060.1 | Symbols: ATHB16, ATHB-16 | ATHB16 (ARABIDOPSIS
THALIANA HOMEOBOX PROTEIN 16); sequence-specific DNA binding /
transcription activator/ transcription factor | chr4:18571682-18572774
REVERSE
Length = 295
Score = 67 bits (163), Expect = 1e-011
Identities = 39/97 (40%), Positives = 53/97 (54%), Gaps = 7/97 (7%)
Frame = +2
Query: 296 SRKKLRLSKDQSAILEESFKEHNTLNPXXXXXXXXXXGLRPRQVEVWFQNRRARTKLKQT 475
S KK RL DQ LE++F+ N L P GL+PRQV VWFQNRRAR K KQ
Sbjct: 57 SEKKRRLKVDQVKALEKNFELENKLEPERKTKLAQELGLQPRQVAVWFQNRRARWKTKQL 116
Query: 476 EVD-------CEFLKRCCENLTEENRRLQKEVQELRA 565
E D + L+ ++L +N L +E+ +++A
Sbjct: 117 EKDYGVLKGQYDSLRHNFDSLRRDNDSLLQEISKIKA 153
>TAIR9_protein||AT2G22430.1 | Symbols: ATHB6 | ATHB6; DNA binding / protein
binding / sequence-specific DNA binding / transcription activator/
transcription factor | chr2:9526470-9527612 REVERSE
Length = 312
Score = 67 bits (161), Expect = 3e-011
Identities = 42/104 (40%), Positives = 56/104 (53%), Gaps = 9/104 (8%)
Frame = +2
Query: 278 EEDGET--SRKKLRLSKDQSAILEESFKEHNTLNPXXXXXXXXXXGLRPRQVEVWFQNRR 451
EE G S KK RLS +Q LE++F+ N L P GL+PRQV VWFQNRR
Sbjct: 52 EERGHVGLSEKKRRLSINQVKALEKNFELENKLEPERKVKLAQELGLQPRQVAVWFQNRR 111
Query: 452 ARTKLKQTEVD-------CEFLKRCCENLTEENRRLQKEVQELR 562
AR K KQ E D + L+ ++L +N L +E+ +L+
Sbjct: 112 ARWKTKQLEKDYGVLKTQYDSLRHNFDSLRRDNESLLQEISKLK 155
>TAIR9_protein||AT2G18550.1 | Symbols: HB-2, ATHB21 | HB-2 (HOMEOBOX-2); DNA
binding / transcription factor | chr2:8049663-8051213 REVERSE
Length = 221
Score = 66 bits (160), Expect = 3e-011
Identities = 46/134 (34%), Positives = 61/134 (45%), Gaps = 3/134 (2%)
Frame = +2
Query: 278 EEDGETSRKKLRLSKDQSAILEESFKEHNTLNPXXXXXXXXXXGLRPRQVEVWFQNRRAR 457
E +G +K +LS +Q +LE SF++ + L GL PRQV VWFQNRRAR
Sbjct: 53 ENEGNGWFRKRKLSDEQVRMLEISFEDDHKLESERKDRLASELGLDPRQVAVWFQNRRAR 112
Query: 458 TKLKQTEVDCEFLKRCCENLTEENRRLQKEVQELRALKLSPQFYMQMTPPT---TLTMCP 628
K K+ E + LK E E RL EV L+ + +Q TL+ P
Sbjct: 113 WKNKRVEDEYTKLKNAYETTVVEKCRLDSEVIHLKEQLYEAEREIQRLAKRVEGTLSNSP 172
Query: 629 SCERVAVPPNSTPP 670
V + N T P
Sbjct: 173 ISSSVTIEANHTTP 186
>TAIR9_protein||AT5G06710.2 | Symbols: HAT14 | HAT14 (HOMEOBOX FROM ARABIDOPSIS
THALIANA); DNA binding / transcription factor | chr5:2069093-2070284
REVERSE
Length = 238
Score = 65 bits (157), Expect = 7e-011
Identities = 34/58 (58%), Positives = 44/58 (75%), Gaps = 4/58 (6%)
Frame = +2
Query: 215 EREANGEDLD--LERDGSRGMSDEEDGE--TSRKKLRLSKDQSAILEESFKEHNTLNP 376
ER +N D+D +ER SR +++ D E ++RKKLRLSKDQSA LE+SFKEH+TLNP
Sbjct: 157 ERRSNKRDIDDEVERSASRASNEDNDDENGSTRKKLRLSKDQSAFLEDSFKEHSTLNP 214
>TAIR9_protein||AT2G46680.1 | Symbols: ATHB-7, ATHB7 | ATHB-7 (ARABIDOPSIS
THALIANA HOMEOBOX 7); transcription activator/ transcription factor |
chr2:19165777-19166773 REVERSE
Length = 259
Score = 64 bits (154), Expect = 2e-010
Identities = 37/106 (34%), Positives = 53/106 (50%), Gaps = 4/106 (3%)
Frame = +2
Query: 278 EEDGETSRKKLRLSKDQSAILEESFKEHNTLNPXXXXXXXXXXGLRPRQVEVWFQNRRAR 457
++ + R S +Q LE F+ L P GL+PRQV +WFQN+RAR
Sbjct: 24 KKSNHNKNNQRRFSDEQIKSLEMMFESETRLEPRKKVQLARELGLQPRQVAIWFQNKRAR 83
Query: 458 TKLKQTEVDCEFLKRCCENLTEENRRLQKE----VQELRALKLSPQ 583
K KQ E + L++ +NL + L+KE V EL+ LK + Q
Sbjct: 84 WKSKQLETEYNILRQNYDNLASQFESLKKEKQALVSELQRLKEATQ 129
>TAIR9_protein||AT2G46680.2 | Symbols: ATHB-7, ATHB7 | ATHB-7 (ARABIDOPSIS
THALIANA HOMEOBOX 7); transcription activator/ transcription factor |
chr2:19165777-19166773 REVERSE
Length = 257
Score = 63 bits (152), Expect = 3e-010
Identities = 34/99 (34%), Positives = 50/99 (50%)
Frame = +2
Query: 278 EEDGETSRKKLRLSKDQSAILEESFKEHNTLNPXXXXXXXXXXGLRPRQVEVWFQNRRAR 457
++ + R S +Q LE F+ L P GL+PRQV +WFQN+RAR
Sbjct: 24 KKSNHNKNNQRRFSDEQIKSLEMMFESETRLEPRKKVQLARELGLQPRQVAIWFQNKRAR 83
Query: 458 TKLKQTEVDCEFLKRCCENLTEENRRLQKEVQELRALKL 574
K KQ E + L++ +NL + L+KE Q L + +L
Sbjct: 84 WKSKQLETEYNILRQNYDNLASQFESLKKEKQALVSERL 122
>TAIR9_protein||AT4G36740.1 | Symbols: HB-5, ATHB40 | ATHB40 (ARABIDOPSIS
THALIANA HOMEOBOX PROTEIN 40); DNA binding / transcription factor |
chr4:17314649-17316314 REVERSE
Length = 217
Score = 62 bits (149), Expect = 6e-010
Identities = 42/136 (30%), Positives = 64/136 (47%), Gaps = 3/136 (2%)
Frame = +2
Query: 269 MSDEEDGETSRKKLRLSKDQSAILEESFKEHNTLNPXXXXXXXXXXGLRPRQVEVWFQNR 448
++ + G +K +L+ +Q +LE SF + + L GL PRQV VWFQNR
Sbjct: 44 VASADGGNGLFRKRKLTDEQVNMLEMSFGDEHKLESERKDRLAAELGLDPRQVAVWFQNR 103
Query: 449 RARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQELRALKLSPQFYMQMTPPTT---LT 619
RAR K K+ E + LK +N+ + RL+ EV +L+ + +Q +
Sbjct: 104 RARWKNKRLEEEYNKLKNSHDNVVVDKCRLESEVIQLKEQLYDAEREIQRLAERVEGGSS 163
Query: 620 MCPSCERVAVPPNSTP 667
P V+V N TP
Sbjct: 164 NSPISSSVSVEANETP 179
>TAIR9_protein||AT3G61890.1 | Symbols: ATHB-12, ATHB12 | ATHB-12 (ARABIDOPSIS
THALIANA HOMEOBOX 12); transcription activator/ transcription factor |
chr3:22914346-22915239 REVERSE
Length = 236
Score = 60 bits (145), Expect = 2e-009
Identities = 36/101 (35%), Positives = 53/101 (52%), Gaps = 1/101 (0%)
Frame = +2
Query: 260 SRGMS-DEEDGETSRKKLRLSKDQSAILEESFKEHNTLNPXXXXXXXXXXGLRPRQVEVW 436
S GM+ +++ + S + R S++Q LE F+ L P GL+PRQV +W
Sbjct: 15 SSGMTMNKKKMKKSNNQKRFSEEQIKSLELIFESETRLEPRKKVQVARELGLQPRQVAIW 74
Query: 437 FQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQEL 559
FQN+RAR K KQ E + L+ NL + ++KE Q L
Sbjct: 75 FQNKRARWKTKQLEKEYNTLRANYNNLASQFEIMKKEKQSL 115
>TAIR9_protein||AT1G79840.1 | Symbols: GL2 | GL2 (GLABRA 2); DNA binding /
transcription factor | chr1:30037526-30041013 FORWARD
Length = 748
Score = 58 bits (139), Expect = 9e-009
Identities = 39/115 (33%), Positives = 53/115 (46%), Gaps = 3/115 (2%)
Frame = +2
Query: 209 RSEREANGEDLDLERDGSRGMSDEEDGETSRKKL---RLSKDQSAILEESFKEHNTLNPX 379
RSE + GED D E + + G RK+ R + DQ +E FKE +
Sbjct: 70 RSEEDLEGEDHDDEEEEEEDGAAGNKGTNKRKRKKYHRHTTDQIRHMEALFKETPHPDEK 129
Query: 380 XXXXXXXXXGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQK 544
GL PRQV+ WFQNRR + K Q + LK E L EEN+ +++
Sbjct: 130 QRQQLSKQLGLAPRQVKFWFQNRRTQIKAIQERHENSLLKAELEKLREENKAMRE 184
>TAIR9_protein||AT5G53980.1 | Symbols: ATHB52 | ATHB52 (ARABIDOPSIS THALIANA
HOMEOBOX PROTEIN 52); transcription factor | chr5:21914087-21914557
FORWARD
Length = 157
Score = 55 bits (131), Expect = 8e-008
Identities = 37/125 (29%), Positives = 55/125 (44%), Gaps = 4/125 (3%)
Frame = +2
Query: 275 DEEDGETSRKKLRLSKDQSAILEESFKEHNTLNPXXXXXXXXXXGLRPRQVEVWFQNRRA 454
+ + KK RL++DQ LE+ F + L P GL RQV VWFQN+RA
Sbjct: 2 ENSQSQGKNKKKRLTQDQVRQLEKCFTMNKKLEPDLKLQLSNQLGLPQRQVAVWFQNKRA 61
Query: 455 RTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQ----ELRALKLSPQFYMQMTPPTTLTM 622
R K + EV L+ E + +L+ +VQ EL+ + + P +
Sbjct: 62 RFKTQSLEVQHCTLQSKHEAALSDKAKLEHQVQFLQDELKRARNQLALFTNQDSPVDNSN 121
Query: 623 CPSCE 637
SC+
Sbjct: 122 LGSCD 126
>TAIR9_protein||AT5G66700.1 | Symbols: HB53, HB-8, ATHB53 | HB53; DNA binding /
transcription factor | chr5:26634406-26635762 FORWARD
Length = 229
Score = 55 bits (130), Expect = 1e-007
Identities = 35/103 (33%), Positives = 53/103 (51%), Gaps = 2/103 (1%)
Frame = +2
Query: 257 GSRGMSDEEDGETS--RKKLRLSKDQSAILEESFKEHNTLNPXXXXXXXXXXGLRPRQVE 430
GS ++E+ E +K +L+ +Q +LE SF + L GL PRQV
Sbjct: 54 GSSATNEEDVAEIGGMLRKRKLTDEQVNMLEYSFGNEHKLESGRKEKIAGELGLDPRQVA 113
Query: 431 VWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQEL 559
VWFQNRRAR K K+ E + LK +N+ +L+ ++ +L
Sbjct: 114 VWFQNRRARWKNKKLEEEYAKLKNHHDNVVLGQCQLESQILKL 156
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 450,328,727
Number of Sequences: 33410
Number of Extensions: 450328727
Number of Successful Extensions: 25624131
Number of sequences better than 0.0: 0
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