BLASTX 7.6.2
Query= RU01229 /QuerySize=593
(592 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G60210.1 | Symbols: | chloroplast chaperonin ... 182 2e-046
TAIR9_protein||AT2G44650.1 | Symbols: CHL-CPN10, CPN10 | CHL-CPN... 173 9e-044
TAIR9_protein||AT5G20720.1 | Symbols: CPN20, CPN10, CHCPN10, ATC... 52 3e-007
TAIR9_protein||AT5G20720.2 | Symbols: CPN20, CPN10, CHCPN10, ATC... 52 3e-007
>TAIR9_protein||AT3G60210.1 | Symbols: | chloroplast chaperonin 10, putative |
chr3:22251443-22252709 REVERSE
Length = 139
Score = 182 bits (460), Expect = 2e-046
Identities = 92/132 (69%), Positives = 109/132 (82%), Gaps = 5/132 (3%)
Frame = -2
Query: 540 PNPLVCRP---NTSSLSSQKLLPGLRRNSLRVNAIAKKWEPTKVVPQADRVLIRLEQLPE 370
P P + P N +L Q LL G+RRNS R+NA++ KWEP KVVPQADRVL+RLE LPE
Sbjct: 9 PKPFLSFPIKTNAPTLPQQTLL-GIRRNSFRINAVSTKWEPAKVVPQADRVLVRLEVLPE 67
Query: 369 KSAGGVLLPKSAVKFERYLMGEVLSIGSEVGEVQAGKKVLFSDINAYEVDLGTE-GRHCF 193
KS+GGVLLPKSAVKFERYL GEV+S+GSEVGEV+ GKKVLFSD++AYEVD GTE +HCF
Sbjct: 68 KSSGGVLLPKSAVKFERYLTGEVVSVGSEVGEVEPGKKVLFSDMSAYEVDFGTEDAKHCF 127
Query: 192 CKESELLAVVE* 157
CKES+LLA+V+*
Sbjct: 128 CKESDLLAIVQ* 139
>TAIR9_protein||AT2G44650.1 | Symbols: CHL-CPN10, CPN10 | CHL-CPN10 (CHLOROPLAST
CHAPERONIN 10); chaperone binding | chr2:18419521-18420510 REVERSE
Length = 140
Score = 173 bits (437), Expect = 9e-044
Identities = 89/132 (67%), Positives = 106/132 (80%), Gaps = 5/132 (3%)
Frame = -2
Query: 540 PNPLVCRP---NTSSLSSQKLLPGLRRNSLRVNAIAKKWEPTKVVPQADRVLIRLEQLPE 370
PNP P T S ++ LL G RR LR+ AI+ KWEPTKVVPQADRVL+RLE LP
Sbjct: 10 PNPFFAFPVKATTPSTANHTLL-GSRRGCLRIKAISTKWEPTKVVPQADRVLVRLEDLPI 68
Query: 369 KSAGGVLLPKSAVKFERYLMGEVLSIGSEVG-EVQAGKKVLFSDINAYEVDLGTEGRHCF 193
KS+GGVLLPK+AVKFERYL GE++S+GSEVG +V GK+VLFSD++AYEVDLGT+ RHCF
Sbjct: 69 KSSGGVLLPKAAVKFERYLTGEIISVGSEVGQQVGPGKRVLFSDVSAYEVDLGTDARHCF 128
Query: 192 CKESELLAVVE* 157
CKES+LLA+VE*
Sbjct: 129 CKESDLLALVE* 140
>TAIR9_protein||AT5G20720.1 | Symbols: CPN20, CPN10, CHCPN10, ATCPN21, CPN21 |
CPN20 (CHAPERONIN 20); calmodulin binding | chr5:7015015-7016354
FORWARD
Length = 254
Score = 52 bits (122), Expect = 3e-007
Identities = 38/132 (28%), Positives = 71/132 (53%), Gaps = 20/132 (15%)
Frame = -2
Query: 510 SSLSSQKLLPG-LRRNSLR------VNAIAKKWEPTKVVPQADRVLIRLEQLPEKSAGGV 352
SS+ L PG LR++ R + +A K+ T + P DRVL+++++ EK+ GG+
Sbjct: 27 SSVKFSSLKPGTLRQSQFRRLVVKAASVVAPKY--TSIKPLGDRVLVKIKEAEEKTLGGI 84
Query: 351 LLPKSAVKFERYLMGEVLSIGS--EVGE------VQAGKKVLFSDINAYEVDLGTEGRHC 196
LLP +A + GEV+++G +G+ V G ++++S EV+ + +H
Sbjct: 85 LLPSTAQ--SKPQGGEVVAVGEGRTIGKNKIDITVPTGAQIIYSKYAGTEVEF-NDVKHL 141
Query: 195 FCKESELLAVVE 160
KE +++ ++E
Sbjct: 142 ILKEDDIVGILE 153
>TAIR9_protein||AT5G20720.2 | Symbols: CPN20, CPN10, CHCPN10, ATCPN21, CPN21 |
CPN20 (CHAPERONIN 20); calmodulin binding | chr5:7015015-7016354
FORWARD
Length = 254
Score = 52 bits (122), Expect = 3e-007
Identities = 38/132 (28%), Positives = 71/132 (53%), Gaps = 20/132 (15%)
Frame = -2
Query: 510 SSLSSQKLLPG-LRRNSLR------VNAIAKKWEPTKVVPQADRVLIRLEQLPEKSAGGV 352
SS+ L PG LR++ R + +A K+ T + P DRVL+++++ EK+ GG+
Sbjct: 27 SSVKFSSLKPGTLRQSQFRRLVVKAASVVAPKY--TSIKPLGDRVLVKIKEAEEKTLGGI 84
Query: 351 LLPKSAVKFERYLMGEVLSIGS--EVGE------VQAGKKVLFSDINAYEVDLGTEGRHC 196
LLP +A + GEV+++G +G+ V G ++++S EV+ + +H
Sbjct: 85 LLPSTAQ--SKPQGGEVVAVGEGRTIGKNKIDITVPTGAQIIYSKYAGTEVEF-NDVKHL 141
Query: 195 FCKESELLAVVE 160
KE +++ ++E
Sbjct: 142 ILKEDDIVGILE 153
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 450,328,727
Number of Sequences: 33410
Number of Extensions: 450328727
Number of Successful Extensions: 25624131
Number of sequences better than 0.0: 0
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