BLASTX 7.6.2
Query= RU01286 /QuerySize=960
(959 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G47850.1 | Symbols: | zinc finger (CCCH-type)... 228 7e-060
TAIR9_protein||AT2G47850.2 | Symbols: | zinc finger (CCCH-type)... 228 7e-060
TAIR9_protein||AT2G47850.3 | Symbols: | zinc finger (CCCH-type)... 228 7e-060
TAIR9_protein||AT3G06410.1 | Symbols: | nucleic acid binding / ... 146 3e-035
TAIR9_protein||AT3G02830.1 | Symbols: ZFN1 | ZFN1 (ZINC FINGER P... 138 9e-033
TAIR9_protein||AT5G18550.1 | Symbols: | nucleic acid binding / ... 137 1e-032
TAIR9_protein||AT5G16540.3 | Symbols: ZFN3 | ZFN3 (ZINC FINGER N... 132 3e-031
TAIR9_protein||AT5G16540.1 | Symbols: ZFN3 | ZFN3 (ZINC FINGER N... 132 3e-031
TAIR9_protein||AT5G16540.2 | Symbols: ZFN3 | ZFN3 (ZINC FINGER N... 116 2e-026
TAIR9_protein||AT1G04990.2 | Symbols: | zinc finger (CCCH-type)... 106 4e-023
TAIR9_protein||AT1G04990.1 | Symbols: | zinc finger (CCCH-type)... 106 4e-023
TAIR9_protein||AT3G12680.1 | Symbols: HUA1 | HUA1 (ENHANCER OF A... 101 9e-022
TAIR9_protein||AT5G63260.1 | Symbols: | zinc finger (CCCH-type)... 99 5e-021
TAIR9_protein||AT1G48195.1 | Symbols: | zinc finger (CCCH-type)... 98 8e-021
TAIR9_protein||AT3G48440.1 | Symbols: | zinc finger (CCCH-type)... 97 1e-020
>TAIR9_protein||AT2G47850.1 | Symbols: | zinc finger (CCCH-type) family protein
| chr2:19595953-19598119 FORWARD
Length = 469
Score = 228 bits (579), Expect = 7e-060
Identities = 109/185 (58%), Positives = 131/185 (70%), Gaps = 8/185 (4%)
Frame = -3
Query: 915 EQAFPERPGEPECQYYLRTGDCKFGPSCRYHHPRDRIAPRTNCLLSPVGLPLRSGVQPCM 736
EQAFPERPGEPECQYYL+TGDCKFG SC++HHPRDR+ PR NC+LSP+GLPLR GVQ C
Sbjct: 283 EQAFPERPGEPECQYYLKTGDCKFGTSCKFHHPRDRVPPRANCVLSPIGLPLRPGVQRCT 342
Query: 735 FYLQNGHCKFGSSCKFDHPMGTMRYSPSASSL-DMPVAPFPVXXXXXXXXXXXXXXXXXX 559
FY+QNG CKFGS+CKFDHPMGT+RY+PSASSL D PVAP+PV
Sbjct: 343 FYVQNGFCKFGSTCKFDHPMGTIRYNPSASSLADAPVAPYPVSSLLGALAAAPSSSSTEL 402
Query: 558 XXXXAR------MXXXXXXXXXXVGLIFSQS-GSVSLADVQLSSQTSVPISNSRSTRQGG 400
A+ + GLIFSQS GS+ +++QLSSQ+S+P++ SR TRQG
Sbjct: 403 IAGGAKDAYMTGVPTSRSTSNISAGLIFSQSGGSIPFSELQLSSQSSLPLTGSRITRQGR 462
Query: 399 EVRRS 385
E+RRS
Sbjct: 463 EIRRS 467
Score = 100 bits (247), Expect = 2e-021
Identities = 44/90 (48%), Positives = 59/90 (65%), Gaps = 2/90 (2%)
Frame = -3
Query: 906 FPERPGEPECQYYLRTGDCKFGPSCRYHHPRDRIAPRTNCLLSPVGLPLRSGVQPCMFYL 727
+PER GEP CQ+YL+TG CKFG SC++HHP++ ++ L+ G P+R G C +YL
Sbjct: 87 YPERFGEPPCQFYLKTGTCKFGASCKFHHPKNAGGSMSHVPLNIYGYPVREGDNECSYYL 146
Query: 726 QNGHCKFGSSCKFDHPM--GTMRYSPSASS 643
+ G CKFG +CKF HP GT P AS+
Sbjct: 147 KTGQCKFGITCKFHHPQPAGTTVPPPPASA 176
Score = 97 bits (240), Expect = 1e-020
Identities = 44/88 (50%), Positives = 57/88 (64%), Gaps = 4/88 (4%)
Frame = -3
Query: 909 AFPERPGEPECQYYLRTGDCKFGPSCRYHHPRDRIAPRTNCLLSPVGLPLRSGVQPCMFY 730
++PERPG P+C YY+RTG C +G CRY+HPRDR + + + P R G PC FY
Sbjct: 41 SYPERPGAPDCAYYMRTGVCGYGNRCRYNHPRDRASVEAT-VRATGQYPERFGEPPCQFY 99
Query: 729 LQNGHCKFGSSCKFDHPM---GTMRYSP 655
L+ G CKFG+SCKF HP G+M + P
Sbjct: 100 LKTGTCKFGASCKFHHPKNAGGSMSHVP 127
>TAIR9_protein||AT2G47850.2 | Symbols: | zinc finger (CCCH-type) family protein
| chr2:19595953-19598119 FORWARD
Length = 443
Score = 228 bits (579), Expect = 7e-060
Identities = 109/185 (58%), Positives = 131/185 (70%), Gaps = 8/185 (4%)
Frame = -3
Query: 915 EQAFPERPGEPECQYYLRTGDCKFGPSCRYHHPRDRIAPRTNCLLSPVGLPLRSGVQPCM 736
EQAFPERPGEPECQYYL+TGDCKFG SC++HHPRDR+ PR NC+LSP+GLPLR GVQ C
Sbjct: 257 EQAFPERPGEPECQYYLKTGDCKFGTSCKFHHPRDRVPPRANCVLSPIGLPLRPGVQRCT 316
Query: 735 FYLQNGHCKFGSSCKFDHPMGTMRYSPSASSL-DMPVAPFPVXXXXXXXXXXXXXXXXXX 559
FY+QNG CKFGS+CKFDHPMGT+RY+PSASSL D PVAP+PV
Sbjct: 317 FYVQNGFCKFGSTCKFDHPMGTIRYNPSASSLADAPVAPYPVSSLLGALAAAPSSSSTEL 376
Query: 558 XXXXAR------MXXXXXXXXXXVGLIFSQS-GSVSLADVQLSSQTSVPISNSRSTRQGG 400
A+ + GLIFSQS GS+ +++QLSSQ+S+P++ SR TRQG
Sbjct: 377 IAGGAKDAYMTGVPTSRSTSNISAGLIFSQSGGSIPFSELQLSSQSSLPLTGSRITRQGR 436
Query: 399 EVRRS 385
E+RRS
Sbjct: 437 EIRRS 441
Score = 97 bits (240), Expect = 1e-020
Identities = 44/88 (50%), Positives = 57/88 (64%), Gaps = 4/88 (4%)
Frame = -3
Query: 909 AFPERPGEPECQYYLRTGDCKFGPSCRYHHPRDRIAPRTNCLLSPVGLPLRSGVQPCMFY 730
++PERPG P+C YY+RTG C +G CRY+HPRDR + + + P R G PC FY
Sbjct: 41 SYPERPGAPDCAYYMRTGVCGYGNRCRYNHPRDRASVEAT-VRATGQYPERFGEPPCQFY 99
Query: 729 LQNGHCKFGSSCKFDHPM---GTMRYSP 655
L+ G CKFG+SCKF HP G+M + P
Sbjct: 100 LKTGTCKFGASCKFHHPKNAGGSMSHVP 127
>TAIR9_protein||AT2G47850.3 | Symbols: | zinc finger (CCCH-type) family protein
| chr2:19595953-19598119 FORWARD
Length = 469
Score = 228 bits (579), Expect = 7e-060
Identities = 109/185 (58%), Positives = 131/185 (70%), Gaps = 8/185 (4%)
Frame = -3
Query: 915 EQAFPERPGEPECQYYLRTGDCKFGPSCRYHHPRDRIAPRTNCLLSPVGLPLRSGVQPCM 736
EQAFPERPGEPECQYYL+TGDCKFG SC++HHPRDR+ PR NC+LSP+GLPLR GVQ C
Sbjct: 283 EQAFPERPGEPECQYYLKTGDCKFGTSCKFHHPRDRVPPRANCVLSPIGLPLRPGVQRCT 342
Query: 735 FYLQNGHCKFGSSCKFDHPMGTMRYSPSASSL-DMPVAPFPVXXXXXXXXXXXXXXXXXX 559
FY+QNG CKFGS+CKFDHPMGT+RY+PSASSL D PVAP+PV
Sbjct: 343 FYVQNGFCKFGSTCKFDHPMGTIRYNPSASSLADAPVAPYPVSSLLGALAAAPSSSSTEL 402
Query: 558 XXXXAR------MXXXXXXXXXXVGLIFSQS-GSVSLADVQLSSQTSVPISNSRSTRQGG 400
A+ + GLIFSQS GS+ +++QLSSQ+S+P++ SR TRQG
Sbjct: 403 IAGGAKDAYMTGVPTSRSTSNISAGLIFSQSGGSIPFSELQLSSQSSLPLTGSRITRQGR 462
Query: 399 EVRRS 385
E+RRS
Sbjct: 463 EIRRS 467
Score = 100 bits (247), Expect = 2e-021
Identities = 44/90 (48%), Positives = 59/90 (65%), Gaps = 2/90 (2%)
Frame = -3
Query: 906 FPERPGEPECQYYLRTGDCKFGPSCRYHHPRDRIAPRTNCLLSPVGLPLRSGVQPCMFYL 727
+PER GEP CQ+YL+TG CKFG SC++HHP++ ++ L+ G P+R G C +YL
Sbjct: 87 YPERFGEPPCQFYLKTGTCKFGASCKFHHPKNAGGSMSHVPLNIYGYPVREGDNECSYYL 146
Query: 726 QNGHCKFGSSCKFDHPM--GTMRYSPSASS 643
+ G CKFG +CKF HP GT P AS+
Sbjct: 147 KTGQCKFGITCKFHHPQPAGTTVPPPPASA 176
Score = 97 bits (240), Expect = 1e-020
Identities = 44/88 (50%), Positives = 57/88 (64%), Gaps = 4/88 (4%)
Frame = -3
Query: 909 AFPERPGEPECQYYLRTGDCKFGPSCRYHHPRDRIAPRTNCLLSPVGLPLRSGVQPCMFY 730
++PERPG P+C YY+RTG C +G CRY+HPRDR + + + P R G PC FY
Sbjct: 41 SYPERPGAPDCAYYMRTGVCGYGNRCRYNHPRDRASVEAT-VRATGQYPERFGEPPCQFY 99
Query: 729 LQNGHCKFGSSCKFDHPM---GTMRYSP 655
L+ G CKFG+SCKF HP G+M + P
Sbjct: 100 LKTGTCKFGASCKFHHPKNAGGSMSHVP 127
>TAIR9_protein||AT3G06410.1 | Symbols: | nucleic acid binding / zinc ion
binding | chr3:1947471-1949528 REVERSE
Length = 463
Score = 146 bits (366), Expect = 3e-035
Identities = 64/100 (64%), Positives = 79/100 (79%), Gaps = 2/100 (2%)
Frame = -3
Query: 906 FPERPGEPECQYYLRTGDCKFGPSCRYHHPRDRIAPRTNCLLSPVGLPLRSGVQPCMFYL 727
FP+RP +PECQY++RTGDCKFG SCRYHHP D + P+T +LS +GLPLR GV C +
Sbjct: 304 FPQRPDQPECQYFMRTGDCKFGSSCRYHHPVDAVPPKTGIVLSSIGLPLRPGVAQCTHFA 363
Query: 726 QNGHCKFGSSCKFDHPM-GTMRYSPSASSL-DMPVAPFPV 613
Q+G CKFG +CKFDH M ++ YSPSASSL DMPVAP+P+
Sbjct: 364 QHGICKFGPACKFDHSMSSSLSYSPSASSLTDMPVAPYPI 403
Score = 97 bits (241), Expect = 1e-020
Identities = 46/103 (44%), Positives = 60/103 (58%), Gaps = 8/103 (7%)
Frame = -3
Query: 909 AFPERPGEPECQYYLRTGDCKFGPSCRYHHPRD-----RIAPRTNCLLSPVGLPLRSGVQ 745
A PER G P CQ+++RTG CKFG SC+YHHPR +AP + LS +G PLR G +
Sbjct: 96 ALPERMGHPVCQHFMRTGTCKFGASCKYHHPRQGGGGGSVAPVS---LSYLGYPLRPGEK 152
Query: 744 PCMFYLQNGHCKFGSSCKFDHPMGTMRYSPSASSLDMPVAPFP 616
C +YL+ G CKFG +C+F+HP+ P P P
Sbjct: 153 ECSYYLRTGQCKFGLTCRFNHPVPLAVQGPPQQPQQQQPQPQP 195
Score = 89 bits (218), Expect = 5e-018
Identities = 45/101 (44%), Positives = 59/101 (58%), Gaps = 4/101 (3%)
Frame = -3
Query: 912 QAFPERPGEPECQYYLRTGDCKFGPSCRYHHPRDRIAPRTNCLLSPVGLPLRSGVQPCMF 733
+++PERP EP+C YYLRTG C +G CR++HPRDR A LP R G C
Sbjct: 49 ESYPERPDEPDCIYYLRTGVCGYGSRCRFNHPRDRGAVIGGVRGEAGALPERMGHPVCQH 108
Query: 732 YLQNGHCKFGSSCKFDHPM---GTMRYSP-SASSLDMPVAP 622
+++ G CKFG+SCK+ HP G +P S S L P+ P
Sbjct: 109 FMRTGTCKFGASCKYHHPRQGGGGGSVAPVSLSYLGYPLRP 149
>TAIR9_protein||AT3G02830.1 | Symbols: ZFN1 | ZFN1 (ZINC FINGER PROTEIN 1); DNA
binding / nuclease/ nucleic acid binding | chr3:614075-615916 FORWARD
Length = 398
Score = 138 bits (345), Expect = 9e-033
Identities = 58/93 (62%), Positives = 69/93 (74%)
Frame = -3
Query: 915 EQAFPERPGEPECQYYLRTGDCKFGPSCRYHHPRDRIAPRTNCLLSPVGLPLRSGVQPCM 736
E FPERPG+PECQ+Y++TGDCKFG C++HHPRDR AP +CLLS +GLPLR G C+
Sbjct: 268 ENVFPERPGQPECQFYMKTGDCKFGTVCKFHHPRDRQAPPPDCLLSSIGLPLRPGEPLCV 327
Query: 735 FYLQNGHCKFGSSCKFDHPMGTMRYSPSASSLD 637
FY + G CKFG SCKFDHPM Y +AS D
Sbjct: 328 FYTRYGICKFGPSCKFDHPMRVFTYDNTASETD 360
Score = 104 bits (258), Expect = 1e-022
Identities = 40/76 (52%), Positives = 56/76 (73%)
Frame = -3
Query: 906 FPERPGEPECQYYLRTGDCKFGPSCRYHHPRDRIAPRTNCLLSPVGLPLRSGVQPCMFYL 727
+PER G+PEC+YYL+TG CKFG +C++HHPR++ L+ +G PLRS C ++L
Sbjct: 82 YPERIGQPECEYYLKTGTCKFGVTCKFHHPRNKAGIAGRVSLNMLGYPLRSNEVDCAYFL 141
Query: 726 QNGHCKFGSSCKFDHP 679
+ GHCKFG +CKF+HP
Sbjct: 142 RTGHCKFGGTCKFNHP 157
Score = 91 bits (224), Expect = 1e-018
Identities = 39/77 (50%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
Frame = -3
Query: 909 AFPERPGEPECQYYLRTGDCKFGPSCRYHHPRDRIAPRTNCLLSPVGLPLRSGVQPCMFY 730
++PERPGEP+C YY+RTG C+FG +CR++HPRDR + P R G C +Y
Sbjct: 36 SYPERPGEPDCSYYIRTGLCRFGSTCRFNHPRDRELVIATARMRG-EYPERIGQPECEYY 94
Query: 729 LQNGHCKFGSSCKFDHP 679
L+ G CKFG +CKF HP
Sbjct: 95 LKTGTCKFGVTCKFHHP 111
>TAIR9_protein||AT5G18550.1 | Symbols: | nucleic acid binding / zinc ion
binding | chr5:6160515-6162729 FORWARD
Length = 466
Score = 137 bits (344), Expect = 1e-032
Identities = 62/103 (60%), Positives = 78/103 (75%), Gaps = 4/103 (3%)
Frame = -3
Query: 915 EQAFPERPGEPECQYYLRTGDCKFGPSCRYHHPRDRIAPRTNCLLSPVGLPLRSGVQPCM 736
EQ FP+RP +PECQY++RTGDCKFG SCR+HHP + +P + LS +GLPLR G PC
Sbjct: 294 EQTFPQRPEQPECQYFMRTGDCKFGTSCRFHHPMEAASPEAS-TLSHIGLPLRPGAVPCT 352
Query: 735 FYLQNGHCKFGSSCKFDHPMG--TMRYSPSASSL-DMPVAPFP 616
+ Q+G CKFG +CKFDH +G ++ YSPS SSL DMPVAP+P
Sbjct: 353 HFAQHGICKFGPACKFDHSLGSSSLSYSPSPSSLTDMPVAPYP 395
Score = 97 bits (241), Expect = 1e-020
Identities = 42/90 (46%), Positives = 61/90 (67%), Gaps = 8/90 (8%)
Frame = -3
Query: 906 FPERPGEPECQYYLRTGDCKFGPSCRYHHPR-----DRIAPRTNCLLSPVGLPLRSGVQP 742
FPER G+P CQ+++RTG CKFG SC+YHHPR D + P + L+ +G PLR G +
Sbjct: 94 FPERMGQPVCQHFMRTGTCKFGASCKYHHPRQGGGGDSVTPVS---LNYMGFPLRPGEKE 150
Query: 741 CMFYLQNGHCKFGSSCKFDHPMGTMRYSPS 652
C ++++ G CKFGS+C++ HP+ +PS
Sbjct: 151 CSYFMRTGQCKFGSTCRYHHPVPPGVQAPS 180
Score = 88 bits (217), Expect = 6e-018
Identities = 40/79 (50%), Positives = 52/79 (65%), Gaps = 2/79 (2%)
Frame = -3
Query: 912 QAFPERPGEPECQYYLRTGDCKFGPSCRYHHPRDRIAPRTNCLLSPVG-LPLRSGVQPCM 736
+ FPERP EP+C YYLRTG C +G CR++HPR+R AP L + G P R G C
Sbjct: 46 ETFPERPDEPDCIYYLRTGVCGYGSRCRFNHPRNR-APVLGGLRTEAGEFPERMGQPVCQ 104
Query: 735 FYLQNGHCKFGSSCKFDHP 679
+++ G CKFG+SCK+ HP
Sbjct: 105 HFMRTGTCKFGASCKYHHP 123
>TAIR9_protein||AT5G16540.3 | Symbols: ZFN3 | ZFN3 (ZINC FINGER NUCLEASE 3); DNA
binding / nuclease/ nucleic acid binding | chr5:5403598-5405034
FORWARD
Length = 355
Score = 132 bits (332), Expect = 3e-031
Identities = 59/96 (61%), Positives = 69/96 (71%), Gaps = 5/96 (5%)
Frame = -3
Query: 915 EQAFPERPGEPECQYYLRTGDCKFGPSCRYHHPRDRIAPRTNCLLSPVGLPLRSGVQPCM 736
E FPERPG+PECQ+Y++TGDCKFG C++HHPRDR P +C+LS VGLPLR G C+
Sbjct: 216 ENVFPERPGQPECQFYMKTGDCKFGTVCKFHHPRDRQTPPPDCVLSSVGLPLRPGEPLCV 275
Query: 735 FYLQNGHCKFGSSCKFDHPMGTMRY-----SPSASS 643
FY + G CKFG SCKFDHPM Y SPS SS
Sbjct: 276 FYSRYGICKFGPSCKFDHPMRVFTYNNNTASPSPSS 311
Score = 95 bits (235), Expect = 5e-020
Identities = 41/96 (42%), Positives = 63/96 (65%), Gaps = 7/96 (7%)
Frame = -3
Query: 906 FPERPGEPECQYYLRTGDCKFGPSCRYHHPRDRIAPRTNCLLSPVGLPLRSGVQPCMFYL 727
+PER G+PEC++YL+TG CKFG +C++HHPR++ + ++ + PLR C ++L
Sbjct: 63 YPERIGQPECEFYLKTGTCKFGVTCKFHHPRNKAGIDGSVSVNVLSYPLRPNEDDCSYFL 122
Query: 726 QNGHCKFGSSCKFDHP-------MGTMRYSPSASSL 640
+ G CKFG +CKF+HP M ++R SP S+L
Sbjct: 123 RIGQCKFGGTCKFNHPQTQSTNLMVSVRGSPVYSAL 158
>TAIR9_protein||AT5G16540.1 | Symbols: ZFN3 | ZFN3 (ZINC FINGER NUCLEASE 3); DNA
binding / nuclease/ nucleic acid binding | chr5:5403437-5405034
FORWARD
Length = 376
Score = 132 bits (332), Expect = 3e-031
Identities = 59/96 (61%), Positives = 69/96 (71%), Gaps = 5/96 (5%)
Frame = -3
Query: 915 EQAFPERPGEPECQYYLRTGDCKFGPSCRYHHPRDRIAPRTNCLLSPVGLPLRSGVQPCM 736
E FPERPG+PECQ+Y++TGDCKFG C++HHPRDR P +C+LS VGLPLR G C+
Sbjct: 237 ENVFPERPGQPECQFYMKTGDCKFGTVCKFHHPRDRQTPPPDCVLSSVGLPLRPGEPLCV 296
Query: 735 FYLQNGHCKFGSSCKFDHPMGTMRY-----SPSASS 643
FY + G CKFG SCKFDHPM Y SPS SS
Sbjct: 297 FYSRYGICKFGPSCKFDHPMRVFTYNNNTASPSPSS 332
Score = 95 bits (235), Expect = 5e-020
Identities = 41/96 (42%), Positives = 63/96 (65%), Gaps = 7/96 (7%)
Frame = -3
Query: 906 FPERPGEPECQYYLRTGDCKFGPSCRYHHPRDRIAPRTNCLLSPVGLPLRSGVQPCMFYL 727
+PER G+PEC++YL+TG CKFG +C++HHPR++ + ++ + PLR C ++L
Sbjct: 84 YPERIGQPECEFYLKTGTCKFGVTCKFHHPRNKAGIDGSVSVNVLSYPLRPNEDDCSYFL 143
Query: 726 QNGHCKFGSSCKFDHP-------MGTMRYSPSASSL 640
+ G CKFG +CKF+HP M ++R SP S+L
Sbjct: 144 RIGQCKFGGTCKFNHPQTQSTNLMVSVRGSPVYSAL 179
>TAIR9_protein||AT5G16540.2 | Symbols: ZFN3 | ZFN3 (ZINC FINGER NUCLEASE 3); DNA
binding / nuclease/ nucleic acid binding | chr5:5403437-5405034
FORWARD
Length = 369
Score = 116 bits (290), Expect = 2e-026
Identities = 54/96 (56%), Positives = 64/96 (66%), Gaps = 12/96 (12%)
Frame = -3
Query: 915 EQAFPERPGEPECQYYLRTGDCKFGPSCRYHHPRDRIAPRTNCLLSPVGLPLRSGVQPCM 736
E FPERPG+PECQ+Y++TGDCKFG C++HHPRDR P +C+LS SG C+
Sbjct: 237 ENVFPERPGQPECQFYMKTGDCKFGTVCKFHHPRDRQTPPPDCVLS-------SGEPLCV 289
Query: 735 FYLQNGHCKFGSSCKFDHPMGTMRY-----SPSASS 643
FY + G CKFG SCKFDHPM Y SPS SS
Sbjct: 290 FYSRYGICKFGPSCKFDHPMRVFTYNNNTASPSPSS 325
Score = 95 bits (235), Expect = 5e-020
Identities = 41/96 (42%), Positives = 63/96 (65%), Gaps = 7/96 (7%)
Frame = -3
Query: 906 FPERPGEPECQYYLRTGDCKFGPSCRYHHPRDRIAPRTNCLLSPVGLPLRSGVQPCMFYL 727
+PER G+PEC++YL+TG CKFG +C++HHPR++ + ++ + PLR C ++L
Sbjct: 84 YPERIGQPECEFYLKTGTCKFGVTCKFHHPRNKAGIDGSVSVNVLSYPLRPNEDDCSYFL 143
Query: 726 QNGHCKFGSSCKFDHP-------MGTMRYSPSASSL 640
+ G CKFG +CKF+HP M ++R SP S+L
Sbjct: 144 RIGQCKFGGTCKFNHPQTQSTNLMVSVRGSPVYSAL 179
>TAIR9_protein||AT1G04990.2 | Symbols: | zinc finger (CCCH-type) family protein
| chr1:1419368-1421454 REVERSE
Length = 405
Score = 106 bits (262), Expect = 4e-023
Identities = 42/97 (43%), Positives = 65/97 (67%), Gaps = 1/97 (1%)
Frame = -3
Query: 915 EQAFPERPGEPECQYYLRTGDCKFGPSCRYHHPRDRIAPRTNCLLSPVGLPLRSGVQPCM 736
++ PER G+P+C+Y+L+TG CK+GP+C+YHHP+DR + + + +GLP+R G +PC
Sbjct: 84 KEELPERIGQPDCEYFLKTGACKYGPTCKYHHPKDRNGAQP-VMFNVIGLPMRLGEKPCP 142
Query: 735 FYLQNGHCKFGSSCKFDHPMGTMRYSPSASSLDMPVA 625
+YL+ G C+FG +CKF HP +S + P A
Sbjct: 143 YYLRTGTCRFGVACKFHHPQPDNGHSTAYGMSSFPAA 179
>TAIR9_protein||AT1G04990.1 | Symbols: | zinc finger (CCCH-type) family protein
| chr1:1419368-1421454 REVERSE
Length = 405
Score = 106 bits (262), Expect = 4e-023
Identities = 42/97 (43%), Positives = 65/97 (67%), Gaps = 1/97 (1%)
Frame = -3
Query: 915 EQAFPERPGEPECQYYLRTGDCKFGPSCRYHHPRDRIAPRTNCLLSPVGLPLRSGVQPCM 736
++ PER G+P+C+Y+L+TG CK+GP+C+YHHP+DR + + + +GLP+R G +PC
Sbjct: 84 KEELPERIGQPDCEYFLKTGACKYGPTCKYHHPKDRNGAQP-VMFNVIGLPMRLGEKPCP 142
Query: 735 FYLQNGHCKFGSSCKFDHPMGTMRYSPSASSLDMPVA 625
+YL+ G C+FG +CKF HP +S + P A
Sbjct: 143 YYLRTGTCRFGVACKFHHPQPDNGHSTAYGMSSFPAA 179
>TAIR9_protein||AT3G12680.1 | Symbols: HUA1 | HUA1 (ENHANCER OF AG-4 1); RNA
binding | chr3:4025276-4028999 REVERSE
Length = 525
Score = 101 bits (250), Expect = 9e-022
Identities = 40/83 (48%), Positives = 56/83 (67%), Gaps = 7/83 (8%)
Frame = -3
Query: 906 FPERPGEPECQYYLRTGDCKFGPSCRYHHPRDRIAPRT-------NCLLSPVGLPLRSGV 748
+P+RPG+ EC YY++TG+CKFG C++HHP DR++ T N LS G P R G
Sbjct: 417 YPQRPGQSECDYYMKTGECKFGERCKFHHPADRLSAMTKQAPQQPNVKLSLAGYPRREGA 476
Query: 747 QPCMFYLQNGHCKFGSSCKFDHP 679
C +Y++ G CK+G++CKFDHP
Sbjct: 477 LNCPYYMKTGTCKYGATCKFDHP 499
>TAIR9_protein||AT5G63260.1 | Symbols: | zinc finger (CCCH-type) family protein
| chr5:25361900-25364453 FORWARD
Length = 436
Score = 99 bits (244), Expect = 5e-021
Identities = 43/89 (48%), Positives = 58/89 (65%), Gaps = 1/89 (1%)
Frame = -3
Query: 912 QAFPERPGEPECQYYLRTGDCKFGPSCRYHHPRDRIAPRTNCLLSPVGLPLRSGVQPCMF 733
+ FPERP +PEC YYL+TGDCKF C+YHHP++R+ + + GLPLR C
Sbjct: 329 EEFPERPDQPECTYYLKTGDCKFKYKCKYHHPKNRLPKQAAFSFNDKGLPLRPDQSMCTH 388
Query: 732 YLQNGHCKFGSSCKFDHPMGTMRYSPSAS 646
Y + G CKFG +C+FDH + +SPS+S
Sbjct: 389 YSRYGICKFGPACRFDHSI-PPTFSPSSS 416
Score = 92 bits (226), Expect = 6e-019
Identities = 38/74 (51%), Positives = 52/74 (70%)
Frame = -3
Query: 900 ERPGEPECQYYLRTGDCKFGPSCRYHHPRDRIAPRTNCLLSPVGLPLRSGVQPCMFYLQN 721
E P EC+YY RTG CK+G SCR+ H ++ +P + L+ +GLP+R G + C FY++N
Sbjct: 147 ENPKLMECKYYFRTGGCKYGESCRFSHMKEHNSPASVPELNFLGLPIRPGEKECPFYMRN 206
Query: 720 GHCKFGSSCKFDHP 679
G CKFGS CKF+HP
Sbjct: 207 GSCKFGSDCKFNHP 220
>TAIR9_protein||AT1G48195.1 | Symbols: | zinc finger (CCCH-type) family protein
| chr1:17796349-17796597 FORWARD
Length = 83
Score = 98 bits (242), Expect = 8e-021
Identities = 41/79 (51%), Positives = 52/79 (65%)
Frame = -3
Query: 918 NEQAFPERPGEPECQYYLRTGDCKFGPSCRYHHPRDRIAPRTNCLLSPVGLPLRSGVQPC 739
+E+ FPERPGEPEC YYLRTG+C +C+YHHP++ C L+ GLPLR G C
Sbjct: 2 SEEKFPERPGEPECSYYLRTGNCYLKQNCKYHHPKNITPSEPQCTLNDKGLPLRPGQAIC 61
Query: 738 MFYLQNGHCKFGSSCKFDH 682
Y + G C+ G +CKFDH
Sbjct: 62 PHYSRFGICRSGPTCKFDH 80
>TAIR9_protein||AT3G48440.1 | Symbols: | zinc finger (CCCH-type) family protein
| chr3:17941402-17943576 FORWARD
Length = 449
Score = 97 bits (241), Expect = 1e-020
Identities = 41/94 (43%), Positives = 60/94 (63%)
Frame = -3
Query: 912 QAFPERPGEPECQYYLRTGDCKFGPSCRYHHPRDRIAPRTNCLLSPVGLPLRSGVQPCMF 733
+ FPERP +PEC YY++TGDCKF +C+YHHP++R+ L+ GLPLR C +
Sbjct: 341 EEFPERPDQPECSYYMKTGDCKFKFNCKYHHPKNRLPKLPPYALNDKGLPLRPDQNICTY 400
Query: 732 YLQNGHCKFGSSCKFDHPMGTMRYSPSASSLDMP 631
Y + G CKFG +C+FDH + + S+ ++ P
Sbjct: 401 YSRYGICKFGPACRFDHSVQPPYSTESSQAIVEP 434
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 450,328,727
Number of Sequences: 33410
Number of Extensions: 450328727
Number of Successful Extensions: 25624131
Number of sequences better than 0.0: 0
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