BLASTX 7.6.2
Query= RU01371 /QuerySize=597
(596 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G01570.1 | Symbols: RGA1, RGA | RGA1 (REPRESSO... 338 2e-093
TAIR9_protein||AT1G14920.1 | Symbols: GAI, RGA2 | GAI (GIBBERELL... 336 8e-093
TAIR9_protein||AT3G03450.1 | Symbols: RGL2 | RGL2 (RGA-LIKE 2); ... 281 3e-076
TAIR9_protein||AT1G66350.1 | Symbols: RGL1, RGL | RGL1 (RGA-LIKE... 267 6e-072
TAIR9_protein||AT5G17490.1 | Symbols: RGL3 | RGL3 (RGA-LIKE PROT... 260 6e-070
TAIR9_protein||AT5G48150.1 | Symbols: PAT1 | PAT1 (phytochrome a... 143 1e-034
TAIR9_protein||AT5G48150.2 | Symbols: PAT1 | PAT1 (phytochrome a... 143 1e-034
TAIR9_protein||AT2G04890.1 | Symbols: SCL21 | SCL21 (SCARECROW-L... 131 5e-031
TAIR9_protein||AT1G50600.1 | Symbols: SCL5 | SCL5; transcription... 129 2e-030
TAIR9_protein||AT1G21450.1 | Symbols: SCL1 | SCL1 (SCARECROW-LIK... 118 4e-027
TAIR9_protein||AT1G07530.1 | Symbols: SCL14, ATGRAS2, GRAS2 | SC... 116 1e-026
TAIR9_protein||AT1G63100.1 | Symbols: | scarecrow transcription... 113 1e-025
TAIR9_protein||AT2G29060.1 | Symbols: | scarecrow transcription... 107 5e-024
TAIR9_protein||AT1G55580.1 | Symbols: LAS, SCL18 | LAS (Lateral ... 103 1e-022
TAIR9_protein||AT5G52510.1 | Symbols: | scarecrow-like transcri... 102 3e-022
TAIR9_protein||AT4G17230.1 | Symbols: SCL13 | SCL13 (Scarecrow-l... 97 5e-021
TAIR9_protein||AT5G59450.1 | Symbols: | scarecrow-like transcri... 96 1e-020
TAIR9_protein||AT1G07520.1 | Symbols: | scarecrow transcription... 94 7e-020
TAIR9_protein||AT4G37650.1 | Symbols: SHR, SGR7 | SHR (SHORT ROO... 88 3e-018
TAIR9_protein||AT1G50420.1 | Symbols: SCL3, SCL-3 | SCL3; transc... 86 1e-017
TAIR9_protein||AT2G37650.1 | Symbols: | scarecrow-like transcri... 73 1e-013
TAIR9_protein||AT3G54220.1 | Symbols: SCR, SGR1 | SCR (SCARECROW... 55 3e-008
>TAIR9_protein||AT2G01570.1 | Symbols: RGA1, RGA | RGA1 (REPRESSOR OF GA1-3 1);
protein binding / transcription factor | chr2:255581-257344 REVERSE
Length = 588
Score = 338 bits (866), Expect = 2e-093
Identities = 168/197 (85%), Positives = 176/197 (89%)
Frame = +1
Query: 1 WPALMQALALRPGGPPAFRLTGIGPPAADNSDHLQEVGWKLAQLAETIHVEFEYRGFVAN 180
WPALMQALALR GGPP FRLTGIGPPA DNSDHL EVG KLAQLAE IHVEFEYRGFVAN
Sbjct: 336 WPALMQALALREGGPPTFRLTGIGPPAPDNSDHLHEVGCKLAQLAEAIHVEFEYRGFVAN 395
Query: 181 SLADLDASMLELRPSEVESVAVNSVFELHKLLARPDAIDKVLSVVKQMKPEIVTVVEQEA 360
SLADLDASMLELRPS+ E+VAVNSVFELHKLL RP I+KVL VVKQ+KP I TVVEQE+
Sbjct: 396 SLADLDASMLELRPSDTEAVAVNSVFELHKLLGRPGGIEKVLGVVKQIKPVIFTVVEQES 455
Query: 361 NHNGPVFLDRFNESLHYYSTLFDSLEGSVNSQDKMMSEVYLGKQIFNVVACEGPDRVERH 540
NHNGPVFLDRF ESLHYYSTLFDSLEG NSQDK+MSEVYLGKQI N+VACEGPDRVERH
Sbjct: 456 NHNGPVFLDRFTESLHYYSTLFDSLEGVPNSQDKVMSEVYLGKQICNLVACEGPDRVERH 515
Query: 541 ETLSQWRTRFDASGFAP 591
ETLSQW RF +SG AP
Sbjct: 516 ETLSQWGNRFGSSGLAP 532
>TAIR9_protein||AT1G14920.1 | Symbols: GAI, RGA2 | GAI (GIBBERELLIC ACID
INSENSITIVE); transcription factor | chr1:5149414-5151015 FORWARD
Length = 534
Score = 336 bits (860), Expect = 8e-093
Identities = 165/196 (84%), Positives = 176/196 (89%)
Frame = +1
Query: 1 WPALMQALALRPGGPPAFRLTGIGPPAADNSDHLQEVGWKLAQLAETIHVEFEYRGFVAN 180
WPALMQALALRPGGPP FRLTGIGPPA DN D+L EVG KLA LAE IHVEFEYRGFVAN
Sbjct: 284 WPALMQALALRPGGPPVFRLTGIGPPAPDNFDYLHEVGCKLAHLAEAIHVEFEYRGFVAN 343
Query: 181 SLADLDASMLELRPSEVESVAVNSVFELHKLLARPDAIDKVLSVVKQMKPEIVTVVEQEA 360
+LADLDASMLELRPSE+ESVAVNSVFELHKLL RP AIDKVL VV Q+KPEI TVVEQE+
Sbjct: 344 TLADLDASMLELRPSEIESVAVNSVFELHKLLGRPGAIDKVLGVVNQIKPEIFTVVEQES 403
Query: 361 NHNGPVFLDRFNESLHYYSTLFDSLEGSVNSQDKMMSEVYLGKQIFNVVACEGPDRVERH 540
NHN P+FLDRF ESLHYYSTLFDSLEG + QDK+MSEVYLGKQI NVVAC+GPDRVERH
Sbjct: 404 NHNSPIFLDRFTESLHYYSTLFDSLEGVPSGQDKVMSEVYLGKQICNVVACDGPDRVERH 463
Query: 541 ETLSQWRTRFDASGFA 588
ETLSQWR RF ++GFA
Sbjct: 464 ETLSQWRNRFGSAGFA 479
>TAIR9_protein||AT3G03450.1 | Symbols: RGL2 | RGL2 (RGA-LIKE 2); transcription
factor | chr3:819636-821279 REVERSE
Length = 548
Score = 281 bits (717), Expect = 3e-076
Identities = 138/200 (69%), Positives = 166/200 (83%), Gaps = 3/200 (1%)
Frame = +1
Query: 1 WPALMQALALRPGGPPAFRLTGIGPPAADNSDHLQEVGWKLAQLAETIHVEFEYRGFVAN 180
WPALMQALALRPGGPP+FRLTGIGPP +NSD LQ++GWKLAQ A+ + VEFE++G A
Sbjct: 299 WPALMQALALRPGGPPSFRLTGIGPPQTENSDSLQQLGWKLAQFAQNMGVEFEFKGLAAE 358
Query: 181 SLADLDASMLELRPSEVESVAVNSVFELHKLLARPDAIDKVLSVVKQMKPEIVTVVEQEA 360
SL+DL+ M E RP E E++ VNSVFELH+LLAR +I+K+L+ VK +KP IVTVVEQEA
Sbjct: 359 SLSDLEPEMFETRP-ESETLVVNSVFELHRLLARSGSIEKLLNTVKAIKPSIVTVVEQEA 417
Query: 361 NHNGPVFLDRFNESLHYYSTLFDSLEGSVN--SQDKMMSEVYLGKQIFNVVACEGPDRVE 534
NHNG VFLDRFNE+LHYYS+LFDSLE S + SQD++MSEVYLG+QI NVVA EG DRVE
Sbjct: 418 NHNGIVFLDRFNEALHYYSSLFDSLEDSYSLPSQDRVMSEVYLGRQILNVVAAEGSDRVE 477
Query: 535 RHETLSQWRTRFDASGFAPV 594
RHET +QWR R ++GF P+
Sbjct: 478 RHETAAQWRIRMKSAGFDPI 497
>TAIR9_protein||AT1G66350.1 | Symbols: RGL1, RGL | RGL1 (RGA-LIKE 1);
transcription factor | chr1:24748327-24749862 FORWARD
Length = 512
Score = 267 bits (680), Expect = 6e-072
Identities = 134/198 (67%), Positives = 158/198 (79%), Gaps = 6/198 (3%)
Frame = +1
Query: 1 WPALMQALALRPGGPPAFRLTGIGPPAADNSDHLQEVGWKLAQLAETIHVEFEYRGFVAN 180
WPAL+QALALRP GPP FRLTGIG D +QEVGWKL QLA TI V FE++ N
Sbjct: 267 WPALIQALALRPNGPPDFRLTGIGYSLTD----IQEVGWKLGQLASTIGVNFEFKSIALN 322
Query: 181 SLADLDASMLELRPSEVESVAVNSVFELHKLLARPDAIDKVLSVVKQMKPEIVTVVEQEA 360
+L+DL ML++RP +ESVAVNSVFELH+LLA P +IDK LS +K ++P+I+TVVEQEA
Sbjct: 323 NLSDLKPEMLDIRPG-LESVAVNSVFELHRLLAHPGSIDKFLSTIKSIRPDIMTVVEQEA 381
Query: 361 NHNGPVFLDRFNESLHYYSTLFDSLEGSVNSQDKMMSEVYLGKQIFNVVACEGPDRVERH 540
NHNG VFLDRF ESLHYYS+LFDSLEG SQD++MSE++LG+QI N+VACEG DRVERH
Sbjct: 382 NHNGTVFLDRFTESLHYYSSLFDSLEGP-PSQDRVMSELFLGRQILNLVACEGEDRVERH 440
Query: 541 ETLSQWRTRFDASGFAPV 594
ETL+QWR RF GF PV
Sbjct: 441 ETLNQWRNRFGLGGFKPV 458
>TAIR9_protein||AT5G17490.1 | Symbols: RGL3 | RGL3 (RGA-LIKE PROTEIN 3);
transcription factor | chr5:5764316-5765887 REVERSE
Length = 524
Score = 260 bits (663), Expect = 6e-070
Identities = 129/200 (64%), Positives = 162/200 (81%), Gaps = 5/200 (2%)
Frame = +1
Query: 1 WPALMQALALRPGGPPAFRLTGIGPPAADNSDHLQEVGWKLAQLAETIHVEFEYRGFVAN 180
WPALMQALALRPGGPP+FRLTG+G P+ N + +QE+GWKLAQLA+ I VEF++ G
Sbjct: 272 WPALMQALALRPGGPPSFRLTGVGNPS--NREGIQELGWKLAQLAQAIGVEFKFNGLTTE 329
Query: 181 SLADLDASMLELRPSEVESVAVNSVFELHKLLARPDAIDKVLSVVKQMKPEIVTVVEQEA 360
L+DL+ M E R +E E++ VNSVFELH +L++P +I+K+L+ VK +KP +VTVVEQEA
Sbjct: 330 RLSDLEPDMFETR-TESETLVVNSVFELHPVLSQPGSIEKLLATVKAVKPGLVTVVEQEA 388
Query: 361 NHNGPVFLDRFNESLHYYSTLFDSLEGSV--NSQDKMMSEVYLGKQIFNVVACEGPDRVE 534
NHNG VFLDRFNE+LHYYS+LFDSLE V SQD++MSEVYLG+QI N+VA EG DR+E
Sbjct: 389 NHNGDVFLDRFNEALHYYSSLFDSLEDGVVIPSQDRVMSEVYLGRQILNLVATEGSDRIE 448
Query: 535 RHETLSQWRTRFDASGFAPV 594
RHETL+QWR R ++GF PV
Sbjct: 449 RHETLAQWRKRMGSAGFDPV 468
>TAIR9_protein||AT5G48150.1 | Symbols: PAT1 | PAT1 (phytochrome a signal
transduction 1); signal transducer/ transcription factor |
chr5:19522497-19524053 REVERSE
Length = 491
Score = 143 bits (359), Expect = 1e-034
Identities = 81/203 (39%), Positives = 125/203 (61%), Gaps = 12/203 (5%)
Frame = +1
Query: 10 LMQALALRPGGPPAFRLTGIG--PPAADNSDHLQEVGWKLAQLAETIHVEFEYRGFVANS 183
L+QA A RPGGPP R+TGI A L VG +LA+LA+ +V FE+ V+ S
Sbjct: 244 LIQAFAARPGGPPRIRITGIDDMTSAYARGGGLSIVGNRLAKLAKQFNVPFEFNS-VSVS 302
Query: 184 LADLDASMLELRPSEVESVAVNSVFELHKL----LARPDAIDKVLSVVKQMKPEIVTVVE 351
++++ L +RP E++AVN F LH + ++ + D++L +VK + P++VT+VE
Sbjct: 303 VSEVKPKNLGVRPG--EALAVNFAFVLHHMPDESVSTENHRDRLLRMVKSLSPKVVTLVE 360
Query: 352 QEANHNGPVFLDRFNESLHYYSTLFDSLEGSVNSQDKMMSEV---YLGKQIFNVVACEGP 522
QE+N N F RF E+++YY+ +F+S++ ++ K V L + + N++ACEG
Sbjct: 361 QESNTNTAAFFPRFMETMNYYAAMFESIDVTLPRDHKQRINVEQHCLARDVVNIIACEGA 420
Query: 523 DRVERHETLSQWRTRFDASGFAP 591
DRVERHE L +WR+RF +GF P
Sbjct: 421 DRVERHELLGKWRSRFGMAGFTP 443
>TAIR9_protein||AT5G48150.2 | Symbols: PAT1 | PAT1 (phytochrome a signal
transduction 1); signal transducer/ transcription factor |
chr5:19522497-19524053 REVERSE
Length = 491
Score = 143 bits (359), Expect = 1e-034
Identities = 81/203 (39%), Positives = 125/203 (61%), Gaps = 12/203 (5%)
Frame = +1
Query: 10 LMQALALRPGGPPAFRLTGIG--PPAADNSDHLQEVGWKLAQLAETIHVEFEYRGFVANS 183
L+QA A RPGGPP R+TGI A L VG +LA+LA+ +V FE+ V+ S
Sbjct: 244 LIQAFAARPGGPPRIRITGIDDMTSAYARGGGLSIVGNRLAKLAKQFNVPFEFNS-VSVS 302
Query: 184 LADLDASMLELRPSEVESVAVNSVFELHKL----LARPDAIDKVLSVVKQMKPEIVTVVE 351
++++ L +RP E++AVN F LH + ++ + D++L +VK + P++VT+VE
Sbjct: 303 VSEVKPKNLGVRPG--EALAVNFAFVLHHMPDESVSTENHRDRLLRMVKSLSPKVVTLVE 360
Query: 352 QEANHNGPVFLDRFNESLHYYSTLFDSLEGSVNSQDKMMSEV---YLGKQIFNVVACEGP 522
QE+N N F RF E+++YY+ +F+S++ ++ K V L + + N++ACEG
Sbjct: 361 QESNTNTAAFFPRFMETMNYYAAMFESIDVTLPRDHKQRINVEQHCLARDVVNIIACEGA 420
Query: 523 DRVERHETLSQWRTRFDASGFAP 591
DRVERHE L +WR+RF +GF P
Sbjct: 421 DRVERHELLGKWRSRFGMAGFTP 443
>TAIR9_protein||AT2G04890.1 | Symbols: SCL21 | SCL21 (SCARECROW-LIKE 21);
transcription factor | chr2:1720575-1721816 REVERSE
Length = 414
Score = 131 bits (327), Expect = 5e-031
Identities = 73/204 (35%), Positives = 124/204 (60%), Gaps = 15/204 (7%)
Frame = +1
Query: 1 WPALMQALALRPGGPPAFRLTGIGPPAADNSDHLQEVGWKLAQLAETIHVEFEYRGFVAN 180
W AL+QA A RPGG P R+TG+G + L V +L +LA+ V F + V+
Sbjct: 171 WIALIQAFAARPGGAPNIRITGVG-----DGSVLVTVKKRLEKLAKKFDVPFRFNA-VSR 224
Query: 181 SLADLDASMLELRPSEVESVAVNSVFELHKL----LARPDAIDKVLSVVKQMKPEIVTVV 348
+++ L++R + E++ VN + LH L ++ + D++L +VK + P++VT+V
Sbjct: 225 PSCEVEVENLDVR--DGEALGVNFAYMLHHLPDESVSMENHRDRLLRMVKSLSPKVVTLV 282
Query: 349 EQEANHNGPVFLDRFNESLHYYSTLFDSLEGSV--NSQDKMMSEVY-LGKQIFNVVACEG 519
EQE N N FL RF E+L YY+ +F+S++ + N ++++ E + + + + N++ACEG
Sbjct: 283 EQECNTNTSPFLPRFLETLSYYTAMFESIDVMLPRNHKERINIEQHCMARDVVNIIACEG 342
Query: 520 PDRVERHETLSQWRTRFDASGFAP 591
+R+ERHE L +W++RF +GF P
Sbjct: 343 AERIERHELLGKWKSRFSMAGFEP 366
>TAIR9_protein||AT1G50600.1 | Symbols: SCL5 | SCL5; transcription factor |
chr1:18737398-18739547 REVERSE
Length = 598
Score = 129 bits (322), Expect = 2e-030
Identities = 77/203 (37%), Positives = 117/203 (57%), Gaps = 12/203 (5%)
Frame = +1
Query: 10 LMQALALRPGGPPAFRLTGIGPPAAD--NSDHLQEVGWKLAQLAETIHVEFEYRGFVANS 183
L++AL RPGGPP R+TGI P + L+ VG +L +LAE V FE+ G A
Sbjct: 351 LIRALGARPGGPPNVRITGIDDPRSSFARQGGLELVGQRLGKLAEMCGVPFEFHG-AALC 409
Query: 184 LADLDASMLELRPSEVESVAVNSVFELHKLLARPDAI----DKVLSVVKQMKPEIVTVVE 351
+++ L +R E++AVN LH + + D++L +VK + P +VT+VE
Sbjct: 410 CTEVEIEKLGVRNG--EALAVNFPLVLHHMPDESVTVENHRDRLLRLVKHLSPNVVTLVE 467
Query: 352 QEANHNGPVFLDRFNESLHYYSTLFDSLEGSVNSQDKMMSEV---YLGKQIFNVVACEGP 522
QEAN N FL RF E++++Y +F+S++ + K V L +++ N++ACEG
Sbjct: 468 QEANTNTAPFLPRFVETMNHYLAVFESIDVKLARDHKERINVEQHCLAREVVNLIACEGV 527
Query: 523 DRVERHETLSQWRTRFDASGFAP 591
+R ERHE L +WR+RF +GF P
Sbjct: 528 EREERHEPLGKWRSRFHMAGFKP 550
>TAIR9_protein||AT1G21450.1 | Symbols: SCL1 | SCL1 (SCARECROW-LIKE 1);
transcription factor | chr1:7509721-7511502 FORWARD
Length = 594
Score = 118 bits (294), Expect = 4e-027
Identities = 73/203 (35%), Positives = 119/203 (58%), Gaps = 12/203 (5%)
Frame = +1
Query: 10 LMQALALRPGGPPAFRLTGIGPPAA--DNSDHLQEVGWKLAQLAETIHVEFEYRGFVANS 183
L++++A PG P RLTGI P + + L+ +G +L QLAE V F+++ + +
Sbjct: 346 LIRSIAELPGKRPRLRLTGIDDPESVQRSIGGLRIIGLRLEQLAEDNGVSFKFKA-MPSK 404
Query: 184 LADLDASMLELRPSEVESVAVNSVFELHKL----LARPDAIDKVLSVVKQMKPEIVTVVE 351
+ + S L +P E++ VN F+LH + + + D++L +VK + P++VTVVE
Sbjct: 405 TSIVSPSTLGCKPG--ETLIVNFAFQLHHMPDESVTTVNQRDELLHMVKSLNPKLVTVVE 462
Query: 352 QEANHNGPVFLDRFNESLHYYSTLFDSLEGSV--NSQDKM-MSEVYLGKQIFNVVACEGP 522
Q+ N N F RF E+ YYS +F+SL+ ++ SQ++M + L + I N+VACEG
Sbjct: 463 QDVNTNTSPFFPRFIEAYEYYSAVFESLDMTLPRESQERMNVERQCLARDIVNIVACEGE 522
Query: 523 DRVERHETLSQWRTRFDASGFAP 591
+R+ER+E +WR R +GF P
Sbjct: 523 ERIERYEAAGKWRARMMMAGFNP 545
>TAIR9_protein||AT1G07530.1 | Symbols: SCL14, ATGRAS2, GRAS2 | SCL14
(SCARECROW-LIKE 14); transcription factor | chr1:2313828-2316137
REVERSE
Length = 770
Score = 116 bits (290), Expect = 1e-026
Identities = 69/194 (35%), Positives = 104/194 (53%), Gaps = 12/194 (6%)
Frame = +1
Query: 31 RPGGPPAFRLTGIGPPAAD--NSDHLQEVGWKLAQLAETIHVEFEYRGFVANSLADLDAS 204
RPGG P R+TGI P ++ +QE G +LA+ + +V FEY +A +
Sbjct: 525 RPGGSPKLRITGIELPQRGFRPAEGVQETGHRLARYCQRHNVPFEYNA-IAQKWETIQVE 583
Query: 205 MLELRPSEVESVAVNSVFELHKLLARPDAI----DKVLSVVKQMKPEIVTVVEQEANHNG 372
L+LR E V VNS+F LL + D VL +++++ P + N+N
Sbjct: 584 DLKLRQGEY--VVVNSLFRFRNLLDETVLVNSPRDAVLKLIRKINPNVFIPAILSGNYNA 641
Query: 373 PVFLDRFNESLHYYSTLFDSLEGSVNSQDK---MMSEVYLGKQIFNVVACEGPDRVERHE 543
P F+ RF E+L +YS +FD + + +D+ M + + G++I NVVACEG +RVER E
Sbjct: 642 PFFVTRFREALFHYSAVFDMCDSKLAREDEMRLMYEKEFYGREIVNVVACEGTERVERPE 701
Query: 544 TLSQWRTRFDASGF 585
T QW+ R +GF
Sbjct: 702 TYKQWQARLIRAGF 715
>TAIR9_protein||AT1G63100.1 | Symbols: | scarecrow transcription factor family
protein | chr1:23399391-23401367 REVERSE
Length = 659
Score = 113 bits (281), Expect = 1e-025
Identities = 72/200 (36%), Positives = 106/200 (53%), Gaps = 12/200 (6%)
Frame = +1
Query: 1 WPALMQALALRPGGPPAFRLTGIGPPAADNSDHLQEVGWKLAQLAETIHVEFEYRGFVAN 180
WP+ Q+LA R P R+TGIG ++ L E G +L AE ++++FE+ V +
Sbjct: 399 WPSFFQSLASRINPPHHVRITGIG----ESKLELNETGDRLHGFAEAMNLQFEFHP-VVD 453
Query: 181 SLADLDASMLELRPSEVESVAVNSVFELHKLL--ARPDAIDKVLSVVKQMKPEIVTVVEQ 354
L D+ ML ++ E ESVAVN V ++HK L AI L +++ P + + EQ
Sbjct: 454 RLEDVRLWMLHVK--EGESVAVNCVMQMHKTLYDGTGAAIRDFLGLIRSTNPIALVLAEQ 511
Query: 355 EANHNGPVFLDRFNESLHYYSTLFDSLEGSVNSQDKM---MSEVYLGKQIFNVVACEGPD 525
EA HN R SL YYS +FD++ ++ + M + E+ G++I N+VACEG
Sbjct: 512 EAEHNSEQLETRVCNSLKYYSAMFDAIHTNLATDSLMRVKVEEMLFGREIRNIVACEGSH 571
Query: 526 RVERHETLSQWRTRFDASGF 585
R ERH WR + GF
Sbjct: 572 RQERHVGFRHWRRMLEQLGF 591
>TAIR9_protein||AT2G29060.1 | Symbols: | scarecrow transcription factor family
protein | chr2:12481991-12486941 FORWARD
Length = 1337
Score = 107 bits (267), Expect = 5e-024
Identities = 68/200 (34%), Positives = 108/200 (54%), Gaps = 12/200 (6%)
Frame = +1
Query: 22 LALRPGGPPAFRLTGIGPPAAD--NSDHLQEVGWKLAQLAETIHVEFEYRGFVANSLADL 195
LA R G R+TGI P ++ + E G +LA+ + ++ FEY +A +
Sbjct: 448 LAWRRGSSCKLRITGIELPQRGFRPAEGVIETGRRLAKYCQKFNIPFEYNA-IAQKWESI 506
Query: 196 DASMLELRPSEVESVAVNSVFELHKLLARPDAI----DKVLSVVKQMKPEIVTVVEQEAN 363
L+L+ E E VAVNS+F LL A+ D VL +++++KP++ +
Sbjct: 507 KLEDLKLK--EGEFVAVNSLFRFRNLLDETVAVHSPRDTVLKLIRKIKPDVFIPGILSGS 564
Query: 364 HNGPVFLDRFNESLHYYSTLFDSLEGSVNSQDK---MMSEVYLGKQIFNVVACEGPDRVE 534
+N P F+ RF E L +YS+LFD + ++ +D M + + G++I NVVACEG +RVE
Sbjct: 565 YNAPFFVTRFREVLFHYSSLFDMCDTNLTREDPMRVMFEKEFYGREIMNVVACEGTERVE 624
Query: 535 RHETLSQWRTRFDASGFAPV 594
R E+ QW+ R +GF +
Sbjct: 625 RPESYKQWQARAMRAGFRQI 644
Score = 76 bits (185), Expect = 2e-014
Identities = 35/100 (35%), Positives = 56/100 (56%), Gaps = 3/100 (3%)
Frame = +1
Query: 295 DKVLSVVKQMKPEIVTVVEQEANHNGPVFLDRFNESLHYYSTLFDSLEGSV---NSQDKM 465
D VL +++ M P++ + N P F+ RF E++++YS LFD + ++ N +
Sbjct: 1184 DAVLKLIRNMNPDVFIHAIVNGSFNAPFFISRFKEAVYHYSALFDMFDSTLPRDNKERIR 1243
Query: 466 MSEVYLGKQIFNVVACEGPDRVERHETLSQWRTRFDASGF 585
+ G++ NV+ACE DRVER ET QW+ R +GF
Sbjct: 1244 FEREFYGREAMNVIACEEADRVERPETYRQWQVRMVRAGF 1283
>TAIR9_protein||AT1G55580.1 | Symbols: LAS, SCL18 | LAS (Lateral Suppressor);
transcription factor | chr1:20764106-20765443 FORWARD
Length = 446
Score = 103 bits (255), Expect = 1e-022
Identities = 69/202 (34%), Positives = 108/202 (53%), Gaps = 16/202 (7%)
Frame = +1
Query: 16 QALALRPGG----PPAFRLTGIGPPAADNSDHLQEVGWKLAQLAETIHVEFEYRG--FVA 177
QALA R PP+ R+TG G L G +L + A+++ ++F++ V
Sbjct: 197 QALAERSSNPSSPPPSLRITGCGRDVTG----LNRTGDRLTRFADSLGLQFQFHTLVIVE 252
Query: 178 NSLAD--LDASMLELRPSEVESVAVNSVFELHKLLARP-DAIDKVLSVVKQMKPEIVTVV 348
LA L +L L + E++AVN V LHK+ D I LS +K + IVT+
Sbjct: 253 EDLAGLLLQIRLLALSAVQGETIAVNCVHFLHKIFNDDGDMIGHFLSAIKSLNSRIVTMA 312
Query: 349 EQEANHNGPVFLDRFNESLHYYSTLFDSLEGSV--NSQDKM-MSEVYLGKQIFNVVACEG 519
E+EANH FL+RF+E++ +Y +FDSLE ++ NS++++ + + + GK+I +VVA E
Sbjct: 313 EREANHGDHSFLNRFSEAVDHYMAIFDSLEATLPPNSRERLTLEQRWFGKEILDVVAAEE 372
Query: 520 PDRVERHETLSQWRTRFDASGF 585
+R +RH W GF
Sbjct: 373 TERKQRHRRFEIWEEMMKRFGF 394
>TAIR9_protein||AT5G52510.1 | Symbols: | scarecrow-like transcription factor 8
(SCL8) | chr5:21307196-21309118 FORWARD
Length = 641
Score = 102 bits (252), Expect = 3e-022
Identities = 61/170 (35%), Positives = 95/170 (55%), Gaps = 8/170 (4%)
Frame = +1
Query: 94 DHLQEVGWKLAQLAETIHVEFEYRGFVANSLADLDASMLELRPSEVESVAVNSVFELHKL 273
+ L+ VG L+QL + + + + + L DL+ L P E++AVN F+L+++
Sbjct: 424 ERLKAVGDLLSQLGDRLGISVSFNVVTSLRLGDLNRESLGCDPD--ETLAVNLAFKLYRV 481
Query: 274 ----LARPDAIDKVLSVVKQMKPEIVTVVEQEANHNGPVFLDRFNESLHYYSTLFDSLEG 441
+ + D++L VK +KP +VT+VEQE N N FL R +ES Y L +S+E
Sbjct: 482 PDESVCTENPRDELLRRVKGLKPRVVTLVEQEMNSNTAPFLGRVSESCACYGALLESVES 541
Query: 442 SVNS--QDKMMSEVYLGKQIFNVVACEGPDRVERHETLSQWRTRFDASGF 585
+V S D+ E +G+++ N VACEG DR+ER E +WR R +GF
Sbjct: 542 TVPSTNSDRAKVEEGIGRKLVNAVACEGIDRIERCEVFGKWRMRMSMAGF 591
>TAIR9_protein||AT4G17230.1 | Symbols: SCL13 | SCL13 (Scarecrow-like 13);
transcription factor | chr4:9661218-9662807 REVERSE
Length = 530
Score = 97 bits (241), Expect = 5e-021
Identities = 59/169 (34%), Positives = 94/169 (55%), Gaps = 10/169 (5%)
Frame = +1
Query: 100 LQEVGWKLAQLAETIHVEFEYRGFVANSLADLDASMLELRPSEVESVAVNSVFELHKLLA 279
L VG +LA LA++ V FE+ + + + L L P +V VN + LH +
Sbjct: 311 LSLVGERLATLAQSCGVPFEFHDAIMSG-CKVQREHLGLEPG--FAVVVNFPYVLHHMPD 367
Query: 280 RPDAI----DKVLSVVKQMKPEIVTVVEQEANHNGPVFLDRFNESLHYYSTLFDSLEGSV 447
++ D++L ++K + P++VT+VEQE+N N FL RF E+L YY+ +F+S++ +
Sbjct: 368 ESVSVENHRDRLLHLIKSLSPKLVTLVEQESNTNTSPFLSRFVETLDYYTAMFESIDAAR 427
Query: 448 NSQDKM---MSEVYLGKQIFNVVACEGPDRVERHETLSQWRTRFDASGF 585
DK + + + I N++ACE +RVERHE L WR R +GF
Sbjct: 428 PRDDKQRISAEQHCVARDIVNMIACEESERVERHEVLGIWRVRMMMAGF 476
>TAIR9_protein||AT5G59450.1 | Symbols: | scarecrow-like transcription factor 11
(SCL11) | chr5:23974808-23976640 FORWARD
Length = 611
Score = 96 bits (238), Expect = 1e-020
Identities = 55/174 (31%), Positives = 93/174 (53%), Gaps = 15/174 (8%)
Frame = +1
Query: 1 WPALMQALALRPGGPPAFRLTGIGPPAAD--NSDHLQEVGWKLAQLAETIHVEFEYRGFV 174
WP L++AL+ RPGGPP R+TGI P A SD ++E G +L + + +V FE+ F+
Sbjct: 346 WPCLLRALSKRPGGPPMLRVTGIELPQAGFRPSDRVEETGRRLKRFCDQFNVPFEF-NFI 404
Query: 175 ANSLADLDASMLELRPSEVESVAVNSVFELHKLLARPDAI-------DKVLSVVKQMKPE 333
A + L + P E+ VN + H+L PD D VL + + + P+
Sbjct: 405 AKKWETITLDELMINPG--ETTVVNCI---HRLQYTPDETVSLDSPRDTVLKLFRDINPD 459
Query: 334 IVTVVEQEANHNGPVFLDRFNESLHYYSTLFDSLEGSVNSQDKMMSEVYLGKQI 495
+ E +N P F+ RF E+L +YS+LFD + +++++D+ + L +++
Sbjct: 460 LFVFAEINGMYNSPFFMTRFREALFHYSSLFDMFDTTIHAEDEYKNRSLLEREL 513
>TAIR9_protein||AT1G07520.1 | Symbols: | scarecrow transcription factor family
protein | chr1:2309718-2311805 REVERSE
Length = 696
Score = 94 bits (231), Expect = 7e-020
Identities = 58/190 (30%), Positives = 93/190 (48%), Gaps = 18/190 (9%)
Frame = +1
Query: 55 RLTGIGPP--AADNSDHLQEVGWKLAQLAETIHVEFEYRGFVANSLADLDASMLELRPSE 228
R+TGI P ++ +Q+ G +L + + V FEY + + + ++RP+E
Sbjct: 458 RITGIEIPQHGLRPTERIQDTGRRLTEYCKRFGVPFEYNAIASKNWETIKMEEFKIRPNE 517
Query: 229 VESVAVNSVFELHKLLARPDAI--------DKVLSVVKQMKPEIVTVVEQEANHNGPVFL 384
V +AVN+V L D I D L +++ M P + + N P F
Sbjct: 518 V--LAVNAVLRFKNL---RDVIPGEEDCPRDGFLKLIRDMNPNVFLSSTVNGSFNAPFFT 572
Query: 385 DRFNESLHYYSTLFDSLEGSVNSQDK---MMSEVYLGKQIFNVVACEGPDRVERHETLSQ 555
RF E+L +YS LFD +++ ++ + G+++ NV+ACEG DRVER ET Q
Sbjct: 573 TRFKEALFHYSALFDLFGATLSKENPERIHFEGEFYGREVMNVIACEGVDRVERPETYKQ 632
Query: 556 WRTRFDASGF 585
W+ R +GF
Sbjct: 633 WQVRMIRAGF 642
>TAIR9_protein||AT4G37650.1 | Symbols: SHR, SGR7 | SHR (SHORT ROOT); protein
binding / sequence-specific DNA binding / transcription factor |
chr4:17691871-17693466 FORWARD
Length = 532
Score = 88 bits (217), Expect = 3e-018
Identities = 63/200 (31%), Positives = 103/200 (51%), Gaps = 18/200 (9%)
Frame = +1
Query: 16 QALALRPGGPPAFRLTGIGPPAADNSDH------LQEVGWKLAQLAETIHVEFEYRGF-V 174
+ALA R P RLT + +D ++E+G ++ + A + V F++
Sbjct: 274 EALATRSDDTPHLRLTTVVVANKFVNDQTASHRMMKEIGNRMEKFARLMGVPFKFNIIHH 333
Query: 175 ANSLADLDASMLELRPSEVESVAVNSVFELHKLLARPDAIDKVLSVVKQMKPEIVTVVEQ 354
L++ D + L+++P EV +A+N V +H + +R D V+S ++++P IVTVVE+
Sbjct: 334 VGDLSEFDLNELDVKPDEV--LAINCVGAMHGIASRGSPRDAVISSFRRLRPRIVTVVEE 391
Query: 355 EANHNG-------PVFLDRFNESLHYYSTLFDSLEGSV--NSQDKMMSEVYLGKQIFNVV 507
EA+ G FL F E L ++ F+S E S S +++M E G+ I ++V
Sbjct: 392 EADLVGEEEGGFDDEFLRGFGECLRWFRVCFESWEESFPRTSNERLMLERAAGRAIVDLV 451
Query: 508 ACEGPDRVERHETLSQWRTR 567
ACE D ER ET +W R
Sbjct: 452 ACEPSDSTERRETARKWSRR 471
Score = 53 bits (126), Expect = 1e-007
Identities = 34/97 (35%), Positives = 49/97 (50%), Gaps = 3/97 (3%)
Frame = +1
Query: 310 VVKQMKPEIVTVVEQEANHNGPVFLDRFNESLHYYSTLFDSLEGSV--NSQDKMMSEVYL 483
+V ++ E V E+E + FL F E L ++ F+S E S S +++M E
Sbjct: 385 IVTVVEEEADLVGEEEGGFDDE-FLRGFGECLRWFRVCFESWEESFPRTSNERLMLERAA 443
Query: 484 GKQIFNVVACEGPDRVERHETLSQWRTRFDASGFAPV 594
G+ I ++VACE D ER ET +W R SGF V
Sbjct: 444 GRAIVDLVACEPSDSTERRETARKWSRRMRNSGFGAV 480
>TAIR9_protein||AT1G50420.1 | Symbols: SCL3, SCL-3 | SCL3; transcription factor
| chr1:18678177-18679625 REVERSE
Length = 483
Score = 86 bits (212), Expect = 1e-017
Identities = 43/103 (41%), Positives = 66/103 (64%), Gaps = 3/103 (2%)
Frame = +1
Query: 295 DKVLSVVKQMKPEIVTVVEQEANHNGPVFLDRFNESLHYYSTLFDSLEGSV--NSQDKMM 468
D L+ + + P+++ V EQ+++HNG ++R ESL+ Y+ LFD LE V SQD++
Sbjct: 330 DSFLNAIWGLSPKVMVVTEQDSDHNGSTLMERLLESLYTYAALFDCLETKVPRTSQDRIK 389
Query: 469 SEVYL-GKQIFNVVACEGPDRVERHETLSQWRTRFDASGFAPV 594
E L G++I N+++CEG +R ERHE L +W R D +GF V
Sbjct: 390 VEKMLFGEEIKNIISCEGFERRERHEKLEKWSQRIDLAGFGNV 432
>TAIR9_protein||AT2G37650.1 | Symbols: | scarecrow-like transcription factor 9
(SCL9) | chr2:15792623-15794779 FORWARD
Length = 719
Score = 73 bits (177), Expect = 1e-013
Identities = 39/103 (37%), Positives = 60/103 (58%), Gaps = 3/103 (2%)
Frame = +1
Query: 295 DKVLSVVKQMKPEIVTVVEQEANHNGPVFLDRFNESLHYYSTLFDSLEGSVNSQD--KMM 468
D VL+++ ++ P++ +N P F+ RF E+L ++S++FD LE V +D +M
Sbjct: 564 DTVLNLIGKINPDLFVFGIVNGAYNAPFFVTRFREALFHFSSIFDMLETIVPREDEERMF 623
Query: 469 SEV-YLGKQIFNVVACEGPDRVERHETLSQWRTRFDASGFAPV 594
E+ G++ NV+ACEG +RVER ET QW R SG V
Sbjct: 624 LEMEVFGREALNVIACEGWERVERPETYKQWHVRAMRSGLVQV 666
>TAIR9_protein||AT3G54220.1 | Symbols: SCR, SGR1 | SCR (SCARECROW); protein
binding / protein homodimerization/ sequence-specific DNA binding /
transcription factor | chr3:20070550-20072625 FORWARD
Length = 654
Score = 55 bits (131), Expect = 3e-008
Identities = 38/114 (33%), Positives = 60/114 (52%), Gaps = 12/114 (10%)
Frame = +1
Query: 1 WPALMQALALRPGGPPAFRLTGIGPPAADNSDHLQEVGWKLAQLAETIHVEFEYRGFVAN 180
WP L LA RPGGPP RLTG+G + + LQ G +L+ A+ + + FE+ +A
Sbjct: 414 WPGLFHILASRPGGPPHVRLTGLG----TSMEALQATGKRLSDFADKLGLPFEFCP-LAE 468
Query: 181 SLADLDASMLELRPSEVESV--AVNSVFEL-----HKLLARPDAIDKVLSVVKQ 321
+ +LD L +R E +V +S++++ H L KV++VV+Q
Sbjct: 469 KVGNLDTERLNVRKREAVAVHWLQHSLYDVTGSDAHTLWLLQRLAPKVVTVVEQ 522
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 509,721,835
Number of Sequences: 33410
Number of Extensions: 509721835
Number of Successful Extensions: 30639055
Number of sequences better than 0.0: 0
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