BLASTX 7.6.2
Query= RU01394 /QuerySize=1086
(1085 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G66760.1 | Symbols: SDH1-1 | SDH1-1; ATP bindi... 559 1e-159
TAIR9_protein||AT2G18450.1 | Symbols: SDH1-2 | SDH1-2; succinate... 534 4e-152
TAIR9_protein||AT5G14760.1 | Symbols: AO | AO (L-ASPARTATE OXIDA... 120 2e-027
>TAIR9_protein||AT5G66760.1 | Symbols: SDH1-1 | SDH1-1; ATP binding / succinate
dehydrogenase | chr5:26653776-26657224 FORWARD
Length = 635
Score = 559 bits (1439), Expect = 1e-159
Identities = 271/318 (85%), Positives = 280/318 (88%)
Frame = +2
Query: 131 MWRCVSRRLGVSSSQRSIAANDCLRSHFSRLFSTESATGRSSYTVVDHTYDXXXXXXXXX 310
MWRCVSR +S+ S + S FSR FST S RSSYT+VDHTYD
Sbjct: 1 MWRCVSRGFRAPASKTSSLFDGVSGSRFSRFFSTGSTDTRSSYTIVDHTYDAVVVGAGGA 60
Query: 311 XXXXXXXLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDW 490
LSEHGFNTACITKLFPTRSHTVAAQGGINAALGNM+EDDWRWHMYDTVKGSDW
Sbjct: 61 GLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMSEDDWRWHMYDTVKGSDW 120
Query: 491 LGDQDAIQYMCREAPKAVIELENYGLPFSRTEEGKIYQRAFGGQSLDFGKGGQAYRCACA 670
LGDQDAIQYMCREAPKAVIELENYGLPFSRTEEGKIYQRAFGGQSLDFGKGGQAYRCACA
Sbjct: 121 LGDQDAIQYMCREAPKAVIELENYGLPFSRTEEGKIYQRAFGGQSLDFGKGGQAYRCACA 180
Query: 671 ADRTGHALLHTLYGQAMRHNTQFFVEYFALDLIMNSDGSCQGVIALNMEDGTLHRFQASS 850
ADRTGHALLHTLYGQAM+HNTQFFVEYFALDL+M SDGSCQGVIALNMEDGTLHRF++S
Sbjct: 181 ADRTGHALLHTLYGQAMKHNTQFFVEYFALDLLMASDGSCQGVIALNMEDGTLHRFRSSQ 240
Query: 851 TILATGGYGRAYFSATSAHTCTGDGNGMVARAGLPLQDLEFVQFHPTGIYGAGCLITEGS 1030
TILATGGYGRAYFSATSAHTCTGDGN MVARAGLPLQDLEFVQFHPTGIYGAGCLITEGS
Sbjct: 241 TILATGGYGRAYFSATSAHTCTGDGNAMVARAGLPLQDLEFVQFHPTGIYGAGCLITEGS 300
Query: 1031 RGEGGILRNSEGERFMER 1084
RGEGGILRNSEGERFMER
Sbjct: 301 RGEGGILRNSEGERFMER 318
>TAIR9_protein||AT2G18450.1 | Symbols: SDH1-2 | SDH1-2; succinate dehydrogenase
| chr2:7997510-8000801 REVERSE
Length = 633
Score = 534 bits (1375), Expect = 4e-152
Identities = 259/308 (84%), Positives = 273/308 (88%), Gaps = 1/308 (0%)
Frame = +2
Query: 164 SSSQRSIAANDCLRSHFSRLFSTESATG-RSSYTVVDHTYDXXXXXXXXXXXXXXXXLSE 340
SSS+RS + + S SR FS + G +SSYT+VDHTYD LSE
Sbjct: 9 SSSRRSESNGAFITSQLSRFFSAPPSAGDKSSYTIVDHTYDAVVVGAGGAGLRAAIGLSE 68
Query: 341 HGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIQYM 520
HGFNTACITKLFPTRSHTVAAQGGINAALGNM+ DDWRWHMYDTVKGSDWLGDQDAIQYM
Sbjct: 69 HGFNTACITKLFPTRSHTVAAQGGINAALGNMSVDDWRWHMYDTVKGSDWLGDQDAIQYM 128
Query: 521 CREAPKAVIELENYGLPFSRTEEGKIYQRAFGGQSLDFGKGGQAYRCACAADRTGHALLH 700
CREAPKAVIELENYGLPFSRTE+GKIYQRAFGGQSL+FG GGQAYRCACAADRTGHALLH
Sbjct: 129 CREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLEFGIGGQAYRCACAADRTGHALLH 188
Query: 701 TLYGQAMRHNTQFFVEYFALDLIMNSDGSCQGVIALNMEDGTLHRFQASSTILATGGYGR 880
TLYGQAM+HNTQFFVEYFALDLIMNSDG+CQGVIALNMEDGTLHRF A STILATGGYGR
Sbjct: 189 TLYGQAMKHNTQFFVEYFALDLIMNSDGTCQGVIALNMEDGTLHRFHAGSTILATGGYGR 248
Query: 881 AYFSATSAHTCTGDGNGMVARAGLPLQDLEFVQFHPTGIYGAGCLITEGSRGEGGILRNS 1060
AYFSATSAHTCTGDGN MVARAGLPLQDLEFVQFHPTGIYGAGCLITEG+RGEGGILRNS
Sbjct: 249 AYFSATSAHTCTGDGNAMVARAGLPLQDLEFVQFHPTGIYGAGCLITEGARGEGGILRNS 308
Query: 1061 EGERFMER 1084
EGE+FM+R
Sbjct: 309 EGEKFMDR 316
>TAIR9_protein||AT5G14760.1 | Symbols: AO | AO (L-ASPARTATE OXIDASE);
L-aspartate oxidase/ electron carrier/ oxidoreductase |
chr5:4769133-4772012 FORWARD
Length = 652
Score = 120 bits (300), Expect = 2e-027
Identities = 82/236 (34%), Positives = 115/236 (48%), Gaps = 14/236 (5%)
Frame = +2
Query: 356 ACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIQYMCREAP 535
A ITK P S+T AQGG++A L + D HM DT+ L D++ ++ +C E P
Sbjct: 110 AVITKDEPHESNTNYAQGGVSAVLCPL--DSVESHMRDTMVAGAHLCDEETVRVVCTEGP 167
Query: 536 KAVIELENYGLPFSRTEEGKIYQRAFGGQSLDFGKGGQAYRCACAADRTGHALLHTLYGQ 715
+ + EL G F E+G ++ GG S R AAD TG + L
Sbjct: 168 ERIRELIAMGASFDHGEDGNLHLAREGGHS--------HCRIVHAADMTGREIERALLEA 219
Query: 716 AMRH-NTQFFVEYFALDLIMNSDG---SCQGVIALNMEDGTLHRFQASSTILATGGYGRA 883
+ N F +FA+DL+ + DG C GV LN++ + RF + T+LA+GG G
Sbjct: 220 VLNDPNISVFKHHFAIDLLTSQDGLNTVCHGVDTLNIKTNEVVRFISKVTLLASGGAGHI 279
Query: 884 YFSATSAHTCTGDGNGMVARAGLPLQDLEFVQFHPTGIYGAGCLITEGSRGEGGIL 1051
Y S T+ TGDG M RA + ++EFVQFHPT + G I + E L
Sbjct: 280 YPSTTNPLVATGDGMAMAHRAQAVISNMEFVQFHPTALADEGLPIKLQTARENAFL 335
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 509,721,835
Number of Sequences: 33410
Number of Extensions: 509721835
Number of Successful Extensions: 30639055
Number of sequences better than 0.0: 0
|