BLASTX 7.6.2
Query= RU01443 /QuerySize=327
(326 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G70600.1 | Symbols: | structural constituent ... 184 1e-047
TAIR9_protein||AT1G23290.1 | Symbols: RPL27A, RPL27AB | RPL27AB;... 177 1e-045
TAIR9_protein||AT1G12960.1 | Symbols: | 60S ribosomal protein L... 60 3e-010
>TAIR9_protein||AT1G70600.1 | Symbols: | structural constituent of ribosome |
chr1:26621168-26621608 REVERSE
Length = 147
Score = 184 bits (465), Expect = 1e-047
Identities = 80/85 (94%), Positives = 84/85 (98%)
Frame = +2
Query: 71 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 250
MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY
Sbjct: 1 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60
Query: 251 FHKLRNKFHCPIVNLEKLWSMVPQE 325
FHKLRNKF CPIVNL+KLWS+VP++
Sbjct: 61 FHKLRNKFFCPIVNLDKLWSLVPED 85
>TAIR9_protein||AT1G23290.1 | Symbols: RPL27A, RPL27AB | RPL27AB; structural
constituent of ribosome | chr1:8263007-8263447 FORWARD
Length = 147
Score = 177 bits (448), Expect = 1e-045
Identities = 77/85 (90%), Positives = 81/85 (95%)
Frame = +2
Query: 71 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 250
M T KKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY
Sbjct: 1 MATALKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRY 60
Query: 251 FHKLRNKFHCPIVNLEKLWSMVPQE 325
FHKLRNKF CPIVNL+KLWS+VP++
Sbjct: 61 FHKLRNKFFCPIVNLDKLWSLVPED 85
>TAIR9_protein||AT1G12960.1 | Symbols: | 60S ribosomal protein L27A (RPL27aA) |
chr1:4422707-4423155 REVERSE
Length = 105
Score = 60 bits (143), Expect = 3e-010
Identities = 30/50 (60%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Frame = +2
Query: 71 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAG-GMHHHRILFDKYH 217
MTT KK R R HVS GHGR GKHRK PG RGNAG GM + L +K++
Sbjct: 1 MTTSRKKTRNLREHVSVGHGRFGKHRKLPGSRGNAGVGMRYFHKLRNKFY 50
Score = 57 bits (136), Expect = 2e-009
Identities = 27/35 (77%), Positives = 29/35 (82%), Gaps = 2/35 (5%)
Frame = +2
Query: 218 PGYFGK--VGMRYFHKLRNKFHCPIVNLEKLWSMV 316
PG G VGMRYFHKLRNKF+C IVNL+KLWSMV
Sbjct: 29 PGSRGNAGVGMRYFHKLRNKFYCQIVNLDKLWSMV 63
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 509,721,835
Number of Sequences: 33410
Number of Extensions: 509721835
Number of Successful Extensions: 30639055
Number of sequences better than 0.0: 0
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