BLASTX 7.6.2
Query= RU01533 /QuerySize=886
(885 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G17380.1 | Symbols: AP19 | AP19; protein bindi... 298 5e-081
TAIR9_protein||AT4G35410.2 | Symbols: | clathrin adaptor comple... 297 1e-080
TAIR9_protein||AT4G35410.1 | Symbols: | clathrin adaptor comple... 214 7e-056
TAIR9_protein||AT1G47830.1 | Symbols: | clathrin coat assembly ... 160 2e-039
TAIR9_protein||AT2G19790.1 | Symbols: | clathrin adaptor comple... 132 4e-031
TAIR9_protein||AT3G50860.1 | Symbols: | clathrin adaptor comple... 106 3e-023
>TAIR9_protein||AT2G17380.1 | Symbols: AP19 | AP19; protein binding / protein
transporter | chr2:7553122-7554887 FORWARD
Length = 162
Score = 298 bits (761), Expect = 5e-081
Identities = 145/162 (89%), Positives = 155/162 (95%)
Frame = -2
Query: 770 MIQFVLLISRQGKVRLTKWYSPYTQKERTKVLRELSGVILARGPKLCNFVEWREYKVVYK 591
MI FVLL+SRQGKVRLTKWYSPYTQKER+KV+RELSGVIL RGPKLCNF+EWR YKVVYK
Sbjct: 1 MIHFVLLVSRQGKVRLTKWYSPYTQKERSKVIRELSGVILNRGPKLCNFIEWRGYKVVYK 60
Query: 590 RYASLYFCMCIDQDDNELEVLEIIHHFVEILDRYFGSVCELDLIFNFHKAYYILDELLIA 411
RYASLYFCMCID+ DNELEVLEIIHH+VEILDRYFGSVCELDLIFNFHKAYYILDELLIA
Sbjct: 61 RYASLYFCMCIDEADNELEVLEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDELLIA 120
Query: 410 GELQESSKKTVARLIAAQDSLVETAKEQASSISNMIAQATK* 285
GELQESSKKTVAR+I+AQD LVE AKE+ASSISN+IAQATK*
Sbjct: 121 GELQESSKKTVARIISAQDQLVEVAKEEASSISNIIAQATK* 162
>TAIR9_protein||AT4G35410.2 | Symbols: | clathrin adaptor complex small chain
family protein | chr4:16832572-16833796 FORWARD
Length = 163
Score = 297 bits (758), Expect = 1e-080
Identities = 145/160 (90%), Positives = 154/160 (96%)
Frame = -2
Query: 770 MIQFVLLISRQGKVRLTKWYSPYTQKERTKVLRELSGVILARGPKLCNFVEWREYKVVYK 591
MI FVLL+SRQGKVRLTKWYSPY QKER+KV+RELSGVIL RGPKLCNFVEWR YKVVYK
Sbjct: 1 MIHFVLLVSRQGKVRLTKWYSPYAQKERSKVIRELSGVILNRGPKLCNFVEWRGYKVVYK 60
Query: 590 RYASLYFCMCIDQDDNELEVLEIIHHFVEILDRYFGSVCELDLIFNFHKAYYILDELLIA 411
RYASLYFCMCIDQ+DNELEVLEIIHH+VEILDRYFGSVCELDLIFNFHKAYYILDELLIA
Sbjct: 61 RYASLYFCMCIDQEDNELEVLEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDELLIA 120
Query: 410 GELQESSKKTVARLIAAQDSLVETAKEQASSISNMIAQAT 291
GELQESSKKTVAR+I+AQD LVE AKE+ASSISN+IAQAT
Sbjct: 121 GELQESSKKTVARIISAQDQLVEVAKEEASSISNIIAQAT 160
>TAIR9_protein||AT4G35410.1 | Symbols: | clathrin adaptor complex small chain
family protein | chr4:16832572-16833476 FORWARD
Length = 125
Score = 214 bits (544), Expect = 7e-056
Identities = 100/109 (91%), Positives = 105/109 (96%)
Frame = -2
Query: 770 MIQFVLLISRQGKVRLTKWYSPYTQKERTKVLRELSGVILARGPKLCNFVEWREYKVVYK 591
MI FVLL+SRQGKVRLTKWYSPY QKER+KV+RELSGVIL RGPKLCNFVEWR YKVVYK
Sbjct: 1 MIHFVLLVSRQGKVRLTKWYSPYAQKERSKVIRELSGVILNRGPKLCNFVEWRGYKVVYK 60
Query: 590 RYASLYFCMCIDQDDNELEVLEIIHHFVEILDRYFGSVCELDLIFNFHK 444
RYASLYFCMCIDQ+DNELEVLEIIHH+VEILDRYFGSVCELDLIFNFHK
Sbjct: 61 RYASLYFCMCIDQEDNELEVLEIIHHYVEILDRYFGSVCELDLIFNFHK 109
>TAIR9_protein||AT1G47830.1 | Symbols: | clathrin coat assembly protein,
putative | chr1:17613346-17614784 REVERSE
Length = 143
Score = 160 bits (403), Expect = 2e-039
Identities = 75/141 (53%), Positives = 103/141 (73%)
Frame = -2
Query: 770 MIQFVLLISRQGKVRLTKWYSPYTQKERTKVLRELSGVILARGPKLCNFVEWREYKVVYK 591
MI+F+LL +RQGK RL K+Y P + E+ KV E+ +++ R K NFVE+R +KV+Y+
Sbjct: 1 MIRFILLQNRQGKTRLAKYYVPLEESEKHKVEYEVHRLVVNRDAKFTNFVEFRTHKVIYR 60
Query: 590 RYASLYFCMCIDQDDNELEVLEIIHHFVEILDRYFGSVCELDLIFNFHKAYYILDELLIA 411
RYA L+F +C+D DNEL LE IH FVEILD +F +VCELDL+FNFHK Y ILDE ++A
Sbjct: 61 RYAGLFFSVCVDITDNELAYLESIHLFVEILDHFFSNVCELDLVFNFHKVYLILDEFILA 120
Query: 410 GELQESSKKTVARLIAAQDSL 348
GELQE+SK+ + ++ + L
Sbjct: 121 GELQETSKRAIIERMSELEKL 141
>TAIR9_protein||AT2G19790.1 | Symbols: | clathrin adaptor complex small chain
family protein | chr2:8527302-8528395 FORWARD
Length = 144
Score = 132 bits (330), Expect = 4e-031
Identities = 60/138 (43%), Positives = 98/138 (71%)
Frame = -2
Query: 767 IQFVLLISRQGKVRLTKWYSPYTQKERTKVLRELSGVILARGPKLCNFVEWREYKVVYKR 588
I+F+L++++QG+ RL ++Y T +ER + E+ LAR + C+FVE R YK+VY+R
Sbjct: 3 IRFILMVNKQGQTRLAQYYEWLTLEERRALEGEIVRKCLARNDQQCSFVEHRNYKIVYRR 62
Query: 587 YASLYFCMCIDQDDNELEVLEIIHHFVEILDRYFGSVCELDLIFNFHKAYYILDELLIAG 408
YASL+F + +D D+NEL +LE IH VE +D++FG+VCELD++F+ KA+++L+E+++ G
Sbjct: 63 YASLFFMVGVDDDENELAILEFIHLLVETMDKHFGNVCELDIMFHLEKAHFMLEEMVMNG 122
Query: 407 ELQESSKKTVARLIAAQD 354
+ E+SK + I D
Sbjct: 123 CIVETSKANILSPIQLMD 140
>TAIR9_protein||AT3G50860.1 | Symbols: | clathrin adaptor complex small chain
family protein | chr3:18902346-18903959 FORWARD
Length = 167
Score = 106 bits (262), Expect = 3e-023
Identities = 54/162 (33%), Positives = 99/162 (61%), Gaps = 6/162 (3%)
Frame = -2
Query: 770 MIQFVLLISRQGKVRLTKWYSPYTQKERTKVLRELSGVILARGPKLCNFVEWR-----EY 606
MI+ V++++ QGK RL K+Y +++ +++R + V+ +R + NF+E +
Sbjct: 1 MIKAVMMMNTQGKPRLAKFYDYLPVEKQQELIRGVFSVLCSRPENVSNFLEIESLFGPDS 60
Query: 605 KVVYKRYASLYFCMCIDQDDNELEVLEIIHHFVEILDRYFGSVCELDLIFNFHKAYYILD 426
++VYK YA+LYF + D +NEL +L++I VE LD+ F +VCELD++FN+ K + +LD
Sbjct: 61 RLVYKHYATLYFVLVFDGSENELAMLDLIQVLVETLDKCFSNVCELDIVFNYSKMHAVLD 120
Query: 425 ELLIAGELQESSKKTVARLIAAQDSLVETAKEQASSISNMIA 300
E++ G++ E+S V + + + S +E A S + ++
Sbjct: 121 EIVFGGQVLETSSAEVMKAV-EEISKLEAASNSISLVPKSVS 161
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 569,754,700
Number of Sequences: 33410
Number of Extensions: 569754700
Number of Successful Extensions: 35675669
Number of sequences better than 0.0: 0
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