BLASTX 7.6.2
Query= RU01764 /QuerySize=1643
(1642 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G62090.1 | Symbols: | FUNCTIONS IN: molecular... 513 1e-145
TAIR9_protein||AT5G62090.2 | Symbols: | FUNCTIONS IN: molecular... 513 1e-145
TAIR9_protein||AT4G25515.1 | Symbols: SLK3 | SLK3 (SEUSS-LIKE 3)... 457 1e-128
TAIR9_protein||AT4G25520.1 | Symbols: SLK1 | SLK1 (SEUSS-LIKE 1)... 438 8e-123
TAIR9_protein||AT1G43850.1 | Symbols: SEU | SEU (seuss); DNA bin... 337 1e-092
TAIR9_protein||AT1G43850.2 | Symbols: SEU | SEU (seuss); DNA bin... 337 1e-092
>TAIR9_protein||AT5G62090.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 17 plant structures;
EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein
match is: SLK1 (SEUSS-LIKE 1); transcription regulator
(TAIR:AT4G25520.1); Has 38202 Blast hits to 15459 proteins in 742
species: Archae - 6; Bacteria - 1392; Metazoa - 14682; Fungi - 3752;
Plants - 2341; Viruses - 407; Other Eukaryotes - 15622 (source: NCBI
BLink). | chr5:24935221-24938540 REVERSE
Length = 817
Score = 513 bits (1321), Expect = 1e-145
Identities = 268/432 (62%), Positives = 314/432 (72%), Gaps = 31/432 (7%)
Frame = -2
Query: 1395 RPYDGGVCARRLMQYLYHQRQRPADNSIAYWRKFVTEYYSPRAKKRWCLSLYDNVGHHAL 1216
RPY+ VCARRLMQYLYHQRQRP+++SI YWRKFVTEY+SPRAKKRWCLS YDNVGH AL
Sbjct: 285 RPYENSVCARRLMQYLYHQRQRPSESSIVYWRKFVTEYFSPRAKKRWCLSHYDNVGHSAL 344
Query: 1215 GVFPQASMDAWQCDICGSKSGRGFEATFEVLPRLNEIKFGSGVIDELLFLDLPRECRFPS 1036
GV PQA+ D WQCD+CGSKSGRGFEATF+VLPRLNEIKF SGV+DELL+L +P E R+ S
Sbjct: 345 GVSPQAATDEWQCDLCGSKSGRGFEATFDVLPRLNEIKFASGVLDELLYLGVPSERRYGS 404
Query: 1035 GVMMLEYGKAVQESVYEQLRVVREGQLRIVFTQDLKILSWEFCARRHEELLPRRLVAPQV 856
G+M+LEYGKAVQESVYE +RVVREG LRI+F+Q+LKILSWEFC RRHEELLPRRLVAPQV
Sbjct: 405 GIMVLEYGKAVQESVYEHIRVVREGHLRIIFSQELKILSWEFCTRRHEELLPRRLVAPQV 464
Query: 855 NQLVQVAQKCQSTIAESGSDGVSQQDLQANSNLVLTAGRQLAKSLELQSLNDLGFSKRYV 676
NQL+QVA+KCQSTI +SGSDG+ QQDLQANSN+V+ AGRQLAKSLE SLNDLGFSKRYV
Sbjct: 465 NQLLQVAEKCQSTIDQSGSDGIHQQDLQANSNMVMAAGRQLAKSLESHSLNDLGFSKRYV 524
Query: 675 RCLQISEVVNSMKDLIDFCRENKVGPIEGLKVYPRHANATXXXXXXXXXXXXXANVQGMP 496
RCLQISEVV+SMKD+IDFCR+ KVGPIE LK YP A A +G+P
Sbjct: 525 RCLQISEVVSSMKDMIDFCRDQKVGPIEALKSYPYRMKA---GKPQMQEMEQLAAARGLP 581
Query: 495 TDRNTLNKLMAL-HPALNNQMNNNQHMXXXXXXXXXXXXXXXXTNYQNLLMRQNSMNSNA 319
DRN+LNKLMAL + +N MNN TNYQ++LM+QN +NS+
Sbjct: 582 PDRNSLNKLMALRNSGINIPMNNMS--GQGSLPGSAQAAAFALTNYQSMLMKQNHLNSDL 639
Query: 318 N--SLQQEAXXXXXXXXXXXXXXXXGAASLIPG---------------PMQNLPGSGYSS 190
N ++QQE G + L+PG P + +P S Y+
Sbjct: 640 NNTTIQQEP-----SRNRSASPSYQGTSPLLPGFVHSPSISGVSSHLSPQRQMPSSSYNG 694
Query: 189 PHLSSRQPHQTP 154
S++Q HQ P
Sbjct: 695 ---STQQYHQQP 703
>TAIR9_protein||AT5G62090.2 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 17 plant structures;
EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein
match is: SLK1 (SEUSS-LIKE 1); transcription regulator
(TAIR:AT4G25520.1); Has 38202 Blast hits to 15459 proteins in 742
species: Archae - 6; Bacteria - 1392; Metazoa - 14682; Fungi - 3752;
Plants - 2341; Viruses - 407; Other Eukaryotes - 15622 (source: NCBI
BLink). | chr5:24935221-24938540 REVERSE
Length = 817
Score = 513 bits (1321), Expect = 1e-145
Identities = 268/432 (62%), Positives = 314/432 (72%), Gaps = 31/432 (7%)
Frame = -2
Query: 1395 RPYDGGVCARRLMQYLYHQRQRPADNSIAYWRKFVTEYYSPRAKKRWCLSLYDNVGHHAL 1216
RPY+ VCARRLMQYLYHQRQRP+++SI YWRKFVTEY+SPRAKKRWCLS YDNVGH AL
Sbjct: 285 RPYENSVCARRLMQYLYHQRQRPSESSIVYWRKFVTEYFSPRAKKRWCLSHYDNVGHSAL 344
Query: 1215 GVFPQASMDAWQCDICGSKSGRGFEATFEVLPRLNEIKFGSGVIDELLFLDLPRECRFPS 1036
GV PQA+ D WQCD+CGSKSGRGFEATF+VLPRLNEIKF SGV+DELL+L +P E R+ S
Sbjct: 345 GVSPQAATDEWQCDLCGSKSGRGFEATFDVLPRLNEIKFASGVLDELLYLGVPSERRYGS 404
Query: 1035 GVMMLEYGKAVQESVYEQLRVVREGQLRIVFTQDLKILSWEFCARRHEELLPRRLVAPQV 856
G+M+LEYGKAVQESVYE +RVVREG LRI+F+Q+LKILSWEFC RRHEELLPRRLVAPQV
Sbjct: 405 GIMVLEYGKAVQESVYEHIRVVREGHLRIIFSQELKILSWEFCTRRHEELLPRRLVAPQV 464
Query: 855 NQLVQVAQKCQSTIAESGSDGVSQQDLQANSNLVLTAGRQLAKSLELQSLNDLGFSKRYV 676
NQL+QVA+KCQSTI +SGSDG+ QQDLQANSN+V+ AGRQLAKSLE SLNDLGFSKRYV
Sbjct: 465 NQLLQVAEKCQSTIDQSGSDGIHQQDLQANSNMVMAAGRQLAKSLESHSLNDLGFSKRYV 524
Query: 675 RCLQISEVVNSMKDLIDFCRENKVGPIEGLKVYPRHANATXXXXXXXXXXXXXANVQGMP 496
RCLQISEVV+SMKD+IDFCR+ KVGPIE LK YP A A +G+P
Sbjct: 525 RCLQISEVVSSMKDMIDFCRDQKVGPIEALKSYPYRMKA---GKPQMQEMEQLAAARGLP 581
Query: 495 TDRNTLNKLMAL-HPALNNQMNNNQHMXXXXXXXXXXXXXXXXTNYQNLLMRQNSMNSNA 319
DRN+LNKLMAL + +N MNN TNYQ++LM+QN +NS+
Sbjct: 582 PDRNSLNKLMALRNSGINIPMNNMS--GQGSLPGSAQAAAFALTNYQSMLMKQNHLNSDL 639
Query: 318 N--SLQQEAXXXXXXXXXXXXXXXXGAASLIPG---------------PMQNLPGSGYSS 190
N ++QQE G + L+PG P + +P S Y+
Sbjct: 640 NNTTIQQEP-----SRNRSASPSYQGTSPLLPGFVHSPSISGVSSHLSPQRQMPSSSYNG 694
Query: 189 PHLSSRQPHQTP 154
S++Q HQ P
Sbjct: 695 ---STQQYHQQP 703
>TAIR9_protein||AT4G25515.1 | Symbols: SLK3 | SLK3 (SEUSS-LIKE 3); transcription
regulator | chr4:13028219-13031463 FORWARD
Length = 686
Score = 457 bits (1175), Expect = 1e-128
Identities = 240/418 (57%), Positives = 292/418 (69%), Gaps = 10/418 (2%)
Frame = -2
Query: 1407 SINKRPYDGGVCARRLMQYLYHQRQRPADNSIAYWRKFVTEYYSPRAKKRWCLSLYDNVG 1228
S N RPY+ GVCAR+LM YLYH +QRPA+N I YWRKFV EY+SPRAK+R CLS Y++VG
Sbjct: 150 SPNVRPYEVGVCARKLMMYLYHLQQRPAENCITYWRKFVAEYFSPRAKQRLCLSQYESVG 209
Query: 1227 HHALGVFPQASMDAWQCDICGSKSGRGFEATFEVLPRLNEIKFGSGVIDELLFLDLPREC 1048
HHALG+FPQA+ D WQCD+CG+KSG+GFEATF+VL RL EIKF SG+IDELL+LD PRE
Sbjct: 210 HHALGMFPQAAPDMWQCDLCGTKSGKGFEATFDVLARLIEIKFASGIIDELLYLDHPREN 269
Query: 1047 RFPSGVMMLEYGKAVQESVYEQLRVVREGQLRIVFTQDLKILSWEFCARRHEELLPRRLV 868
RFP+G+MMLEY KAVQE+V+EQ RVVREG LRI+F+ DLKILSWEFCARRHEELL RRL+
Sbjct: 270 RFPNGLMMLEYRKAVQETVHEQFRVVREGHLRIIFSPDLKILSWEFCARRHEELLLRRLI 329
Query: 867 APQVNQLVQVAQKCQSTIAESGSDGVSQQDLQANSNLVLTAGRQLAKSLELQSLNDLGFS 688
APQVNQL+QVAQKCQSTI+ESGS GVSQQD+Q+NSN+VL AGRQLAK +ELQSLNDLG+
Sbjct: 330 APQVNQLLQVAQKCQSTISESGSQGVSQQDIQSNSNMVLGAGRQLAKFMELQSLNDLGYP 389
Query: 687 KRYVRCLQISEVVNSMKDLIDFCRENKVGPIEGLKVYPRHANATXXXXXXXXXXXXXAN- 511
KRY+R LQISEVV SMKDL++F E+KVGP+EGLK N
Sbjct: 390 KRYIRTLQISEVVKSMKDLMNFTGEHKVGPLEGLKQLLEQTATVKLQRQKMQEMEQFGNS 449
Query: 510 --VQGMPTDRNTLNKLMALHPALNNQMNNNQHMXXXXXXXXXXXXXXXXTNYQNLLMRQN 337
+ G + TL+ NN NN+ + TNYQ++L+RQN
Sbjct: 450 GAMSGPAQAQMTLSSGTMSGSTANNNSNNHHQIVGRGAMNGSPQATAALTNYQSMLIRQN 509
Query: 336 SMNS-NANSLQQEAXXXXXXXXXXXXXXXXGAASLIPGPMQNLPGSGY-SSPHLSSRQ 169
+MN+ N+N+ QE + +NL SG+ SSP + +Q
Sbjct: 510 AMNNQNSNTGNQEGFSSQNPTLNSNQSPSSSSQQ-----RENLATSGFPSSPQMQQQQ 562
>TAIR9_protein||AT4G25520.1 | Symbols: SLK1 | SLK1 (SEUSS-LIKE 1); transcription
regulator | chr4:13032450-13035803 REVERSE
Length = 749
Score = 438 bits (1124), Expect = 8e-123
Identities = 210/273 (76%), Positives = 244/273 (89%)
Frame = -2
Query: 1401 NKRPYDGGVCARRLMQYLYHQRQRPADNSIAYWRKFVTEYYSPRAKKRWCLSLYDNVGHH 1222
N RPY+ GVCAR+LM YLYH +QRPA+N I YWRKFV EY+SPRAK+R CLS Y++ GHH
Sbjct: 180 NVRPYEVGVCARKLMMYLYHLQQRPAENCITYWRKFVAEYFSPRAKQRLCLSQYESAGHH 239
Query: 1221 ALGVFPQASMDAWQCDICGSKSGRGFEATFEVLPRLNEIKFGSGVIDELLFLDLPRECRF 1042
ALG+FPQA+ D WQCD+CG+KSG+GFEATF+VL RL EIKF SG+IDELL+LD PRE RF
Sbjct: 240 ALGMFPQAAPDMWQCDLCGTKSGKGFEATFDVLARLIEIKFASGIIDELLYLDHPRENRF 299
Query: 1041 PSGVMMLEYGKAVQESVYEQLRVVREGQLRIVFTQDLKILSWEFCARRHEELLPRRLVAP 862
P+G+MMLEY KAVQE+V+EQ RVVREG LRI+F+QDLKILSWEFCARRHEELL RRL+AP
Sbjct: 300 PNGLMMLEYRKAVQETVHEQFRVVREGHLRIIFSQDLKILSWEFCARRHEELLLRRLIAP 359
Query: 861 QVNQLVQVAQKCQSTIAESGSDGVSQQDLQANSNLVLTAGRQLAKSLELQSLNDLGFSKR 682
QVNQL+QVAQKCQSTI+ESGS+GVSQQDLQ+NSN+VL AGRQLAK +ELQSLNDLG+ KR
Sbjct: 360 QVNQLLQVAQKCQSTISESGSEGVSQQDLQSNSNMVLGAGRQLAKFMELQSLNDLGYPKR 419
Query: 681 YVRCLQISEVVNSMKDLIDFCRENKVGPIEGLK 583
Y+R LQISEVV SMKDL++F E K+GPIEGLK
Sbjct: 420 YIRTLQISEVVKSMKDLMNFTGEQKIGPIEGLK 452
>TAIR9_protein||AT1G43850.1 | Symbols: SEU | SEU (seuss); DNA binding / protein
binding / protein heterodimerization/ transcription cofactor |
chr1:16617872-16621596 FORWARD
Length = 878
Score = 337 bits (864), Expect = 1e-092
Identities = 166/276 (60%), Positives = 211/276 (76%), Gaps = 5/276 (1%)
Frame = -2
Query: 1398 KRPYDGGVCARRLMQYLYHQRQRPADNSIAYWRKFVTEYYSPRAKKRWCLSLYDNVGHHA 1219
K Y+ G+ A+RL QY+Y Q+ RP DN+I +WRKFV EY++P AKKRWC+S+Y + G
Sbjct: 298 KPVYEPGMGAQRLTQYMYRQQHRPEDNNIEFWRKFVAEYFAPNAKKRWCVSMYGS-GRQT 356
Query: 1218 LGVFPQASMDAWQCDICGSKSGRGFEATFEVLPRLNEIKFGSGVIDELLFLDLPRECRFP 1039
GVFPQ D W C+IC K GRGFEAT EVLPRL +IK+ SG ++ELL++D+PRE +
Sbjct: 357 TGVFPQ---DVWHCEICNRKPGRGFEATAEVLPRLFKIKYESGTLEELLYVDMPRESQNS 413
Query: 1038 SGVMMLEYGKAVQESVYEQLRVVREGQLRIVFTQDLKILSWEFCARRHEELLPRRLVAPQ 859
SG ++LEY KA QESV+E LRVVR+GQLRIVF+ DLKI SWEFCARRHEEL+PRRL+ PQ
Sbjct: 414 SGQIVLEYAKATQESVFEHLRVVRDGQLRIVFSPDLKIFSWEFCARRHEELIPRRLLIPQ 473
Query: 858 VNQLVQVAQKCQSTIAESGSDGVSQQDLQANSNLVLTAGRQLAKSLELQSLNDLGFSKRY 679
V+QL AQK Q A++ + + +LQ N N+ + + RQLAK+LE+ +NDLG++KRY
Sbjct: 474 VSQLGSAAQKYQQA-AQNATTDSALPELQNNCNMFVASARQLAKALEVPLVNDLGYTKRY 532
Query: 678 VRCLQISEVVNSMKDLIDFCRENKVGPIEGLKVYPR 571
VRCLQISEVVNSMKDLID+ RE + GPIE L +PR
Sbjct: 533 VRCLQISEVVNSMKDLIDYSRETRTGPIESLAKFPR 568
>TAIR9_protein||AT1G43850.2 | Symbols: SEU | SEU (seuss); DNA binding / protein
binding / protein heterodimerization/ transcription cofactor |
chr1:16617872-16621596 FORWARD
Length = 878
Score = 337 bits (864), Expect = 1e-092
Identities = 166/276 (60%), Positives = 211/276 (76%), Gaps = 5/276 (1%)
Frame = -2
Query: 1398 KRPYDGGVCARRLMQYLYHQRQRPADNSIAYWRKFVTEYYSPRAKKRWCLSLYDNVGHHA 1219
K Y+ G+ A+RL QY+Y Q+ RP DN+I +WRKFV EY++P AKKRWC+S+Y + G
Sbjct: 298 KPVYEPGMGAQRLTQYMYRQQHRPEDNNIEFWRKFVAEYFAPNAKKRWCVSMYGS-GRQT 356
Query: 1218 LGVFPQASMDAWQCDICGSKSGRGFEATFEVLPRLNEIKFGSGVIDELLFLDLPRECRFP 1039
GVFPQ D W C+IC K GRGFEAT EVLPRL +IK+ SG ++ELL++D+PRE +
Sbjct: 357 TGVFPQ---DVWHCEICNRKPGRGFEATAEVLPRLFKIKYESGTLEELLYVDMPRESQNS 413
Query: 1038 SGVMMLEYGKAVQESVYEQLRVVREGQLRIVFTQDLKILSWEFCARRHEELLPRRLVAPQ 859
SG ++LEY KA QESV+E LRVVR+GQLRIVF+ DLKI SWEFCARRHEEL+PRRL+ PQ
Sbjct: 414 SGQIVLEYAKATQESVFEHLRVVRDGQLRIVFSPDLKIFSWEFCARRHEELIPRRLLIPQ 473
Query: 858 VNQLVQVAQKCQSTIAESGSDGVSQQDLQANSNLVLTAGRQLAKSLELQSLNDLGFSKRY 679
V+QL AQK Q A++ + + +LQ N N+ + + RQLAK+LE+ +NDLG++KRY
Sbjct: 474 VSQLGSAAQKYQQA-AQNATTDSALPELQNNCNMFVASARQLAKALEVPLVNDLGYTKRY 532
Query: 678 VRCLQISEVVNSMKDLIDFCRENKVGPIEGLKVYPR 571
VRCLQISEVVNSMKDLID+ RE + GPIE L +PR
Sbjct: 533 VRCLQISEVVNSMKDLIDYSRETRTGPIESLAKFPR 568
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 659,320,079
Number of Sequences: 33410
Number of Extensions: 659320079
Number of Successful Extensions: 41063224
Number of sequences better than 0.0: 0
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