BLASTX 7.6.2
Query= RU01952 /QuerySize=1536
(1535 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G28300.1 | Symbols: | trihelix DNA-binding pr... 156 4e-038
TAIR9_protein||AT1G76890.2 | Symbols: GT2, AT-GT2 | GT2; transcr... 125 8e-029
TAIR9_protein||AT1G76880.1 | Symbols: | trihelix DNA-binding pr... 119 8e-027
TAIR9_protein||AT1G33240.1 | Symbols: AT-GTL1, AT-GTL2 | AT-GTL1... 115 9e-026
TAIR9_protein||AT5G47660.1 | Symbols: | DNA-binding protein-rel... 70 3e-012
TAIR9_protein||AT5G03680.1 | Symbols: PTL | PTL (PETAL LOSS); tr... 61 2e-009
>TAIR9_protein||AT5G28300.1 | Symbols: | trihelix DNA-binding protein, putative
| chr5:10292789-10295101 REVERSE
Length = 620
Score = 156 bits (393), Expect = 4e-038
Identities = 79/119 (66%), Positives = 90/119 (75%), Gaps = 7/119 (5%)
Frame = +1
Query: 991 KTQN---PSSDDKAQDLGKRWPRDEVLALINLRCSLFN---NXXXXXXXXXXXAVKAPLW 1152
K QN P SDDK+ DLGKRWP+DEVLALIN+R S+ N + + PLW
Sbjct: 441 KNQNPKPPKSDDKS-DLGKRWPKDEVLALINIRRSISNMNDDDHKDENSLSTSSKAVPLW 499
Query: 1153 ERISQGMSELGYKRNAKRCKEKWENINKYFRKTKDVNKKRSLDSRTCPYFHQLSTLYNQ 1329
ERIS+ M E+GYKR+AKRCKEKWENINKYFRKTKDVNKKR LDSRTCPYFHQL+ LY+Q
Sbjct: 500 ERISKKMLEIGYKRSAKRCKEKWENINKYFRKTKDVNKKRPLDSRTCPYFHQLTALYSQ 558
Score = 101 bits (250), Expect = 2e-021
Identities = 44/54 (81%), Positives = 49/54 (90%)
Frame = +2
Query: 23 PWSNDELLALLRIRSTMENWFPEFTWEHVSRKLAEVGFKRSAEKCKEKFEEESR 184
PW +DE+LALLR RST+ENWFPEFTWEH SRKLAEVGFKRS ++CKEKFEEE R
Sbjct: 102 PWCSDEVLALLRFRSTVENWFPEFTWEHTSRKLAEVGFKRSPQECKEKFEEEER 155
Score = 82 bits (201), Expect = 8e-016
Identities = 39/81 (48%), Positives = 53/81 (65%)
Frame = +1
Query: 472 RFEMLKGFCEDIVNKLMAQQEETHSKLLEDMVRRDXXXXXXXXXXXXXXMDRMNKELETM 651
RF +LKGFCE +V ++AQQEE H KLLEDMV+++ ++R+NKE+E
Sbjct: 295 RFGVLKGFCEGLVRNMIAQQEEMHKKLLEDMVKKEEEKIAREEAWKKQEIERVNKEVEIR 354
Query: 652 AHEQAVAGDRQATIIQFLKKF 714
A EQA+A DR II+F+ KF
Sbjct: 355 AQEQAMASDRNTNIIKFISKF 375
>TAIR9_protein||AT1G76890.2 | Symbols: GT2, AT-GT2 | GT2; transcription factor |
chr1:28873211-28875203 REVERSE
Length = 576
Score = 125 bits (313), Expect = 8e-029
Identities = 61/114 (53%), Positives = 72/114 (63%), Gaps = 7/114 (6%)
Frame = +1
Query: 988 LKTQNPSSDDKAQDLGKRWPRDEVLALINLRCSLFNNXXXXXXXXXXXAVKAPLWERISQ 1167
+K N ++ RWP+ EV ALI +R +L N K PLWE IS
Sbjct: 380 IKMGNYDNNHSVSPSSSRWPKTEVEALIRIRKNLEAN-------YQENGTKGPLWEEISA 432
Query: 1168 GMSELGYKRNAKRCKEKWENINKYFRKTKDVNKKRSLDSRTCPYFHQLSTLYNQ 1329
GM LGY R+AKRCKEKWENINKYF+K K+ NKKR LDS+TCPYFHQL LYN+
Sbjct: 433 GMRRLGYNRSAKRCKEKWENINKYFKKVKESNKKRPLDSKTCPYFHQLEALYNE 486
Score = 83 bits (203), Expect = 5e-016
Identities = 43/111 (38%), Positives = 62/111 (55%), Gaps = 8/111 (7%)
Frame = +1
Query: 1033 GKRWPRDEVLALINLRCSLFNNXXXXXXXXXXXAVKAPLWERISQGMSELGYKRNAKRCK 1212
G RWPR E LAL+ +R + +KAPLWE IS+ M ELGYKR++K+CK
Sbjct: 39 GNRWPRPETLALLRIRSEM-------DKAFRDSTLKAPLWEEISRKMMELGYKRSSKKCK 91
Query: 1213 EKWENINKYFRKTKDVNKKRSLDSRTCPYFHQLSTLYNQGILVPPSDHQAA 1365
EK+EN+ KY ++TK+ +S + +T +F +L P + Q A
Sbjct: 92 EKFENVYKYHKRTKEGRTGKS-EGKTYRFFEELEAFETLSSYQPEPESQPA 141
Score = 64 bits (153), Expect = 3e-010
Identities = 31/59 (52%), Positives = 40/59 (67%), Gaps = 5/59 (8%)
Frame = +2
Query: 26 WSNDELLALLRIRSTMENWFPEFT-----WEHVSRKLAEVGFKRSAEKCKEKFEEESRY 187
W E LALLRIRS M+ F + T WE +SRK+ E+G+KRS++KCKEKFE +Y
Sbjct: 42 WPRPETLALLRIRSEMDKAFRDSTLKAPLWEEISRKMMELGYKRSSKKCKEKFENVYKY 100
>TAIR9_protein||AT1G76880.1 | Symbols: | trihelix DNA-binding protein, putative
| chr1:28865594-28867931 FORWARD
Length = 604
Score = 119 bits (296), Expect = 8e-027
Identities = 66/146 (45%), Positives = 76/146 (52%), Gaps = 18/146 (12%)
Frame = +1
Query: 982 DHLKTQNPSSDD---KAQDLGKRWPRDEVLALINLRCSLFNNXXXXXXXXXXXAVKAPLW 1152
D KT N + A RWP+ E+ ALI LR +L K PLW
Sbjct: 386 DTTKTDNGGDQNMTPAASASSSRWPKVEIEALIKLRTNL-------DSKYQENGPKGPLW 438
Query: 1153 ERISQGMSELGYKRNAKRCKEKWENINKYFRKTKDVNKKRSLDSRTCPYFHQLSTLY--- 1323
E IS GM LG+ RN+KRCKEKWENINKYF+K K+ NKKR DS+TCPYFHQL LY
Sbjct: 439 EEISAGMRRLGFNRNSKRCKEKWENINKYFKKVKESNKKRPEDSKTCPYFHQLDALYRER 498
Query: 1324 -----NQGILVPPSDHQAAAPENRSP 1386
N I S P+N P
Sbjct: 499 NKFHSNNNIAASSSSSGLVKPDNSVP 524
Score = 85 bits (209), Expect = 1e-016
Identities = 49/138 (35%), Positives = 72/138 (52%), Gaps = 10/138 (7%)
Frame = +1
Query: 1033 GKRWPRDEVLALINLRCSLFNNXXXXXXXXXXXAVKAPLWERISQGMSELGYKRNAKRCK 1212
G RWPR E LAL+ +R + +VK PLWE +S+ M+E GY RNAK+CK
Sbjct: 59 GNRWPRQETLALLKIRSDM-------GIAFRDASVKGPLWEEVSRKMAEHGYIRNAKKCK 111
Query: 1213 EKWENINKYFRKTKDVNKKRSLDSRTCPYFHQLSTLYNQGILVPPSDHQAAAPENRSPEN 1392
EK+EN+ KY ++TK+ +S + +T +F QL L +Q HQ P R +N
Sbjct: 112 EKFENVYKYHKRTKEGRTGKS-EGKTYRFFDQLEALESQS-TTSLHHHQQQTP-LRPQQN 168
Query: 1393 QSSLAEGEKNNMVLQAVP 1446
++ N+ + P
Sbjct: 169 NNNNNNNNNNSSIFSTPP 186
Score = 56 bits (134), Expect = 5e-008
Identities = 30/59 (50%), Positives = 38/59 (64%), Gaps = 5/59 (8%)
Frame = +2
Query: 26 WSNDELLALLRIRSTMENWFPEFT-----WEHVSRKLAEVGFKRSAEKCKEKFEEESRY 187
W E LALL+IRS M F + + WE VSRK+AE G+ R+A+KCKEKFE +Y
Sbjct: 62 WPRQETLALLKIRSDMGIAFRDASVKGPLWEEVSRKMAEHGYIRNAKKCKEKFENVYKY 120
>TAIR9_protein||AT1G33240.1 | Symbols: AT-GTL1, AT-GTL2 | AT-GTL1 (GT2-LIKE 1);
DNA binding / transcription factor | chr1:12051859-12054320 REVERSE
Length = 670
Score = 115 bits (287), Expect = 9e-026
Identities = 55/111 (49%), Positives = 68/111 (61%), Gaps = 7/111 (6%)
Frame = +1
Query: 1006 SSDDKAQDLGKRWPRDEVLALINLRCSLFNNXXXXXXXXXXXAVKAPLWERISQGMSELG 1185
SS+ + RWP+ E+LALINLR + K LWE IS M +G
Sbjct: 424 SSEQSSLPSSSRWPKAEILALINLRSGM-------EPRYQDNVPKGLLWEEISTSMKRMG 476
Query: 1186 YKRNAKRCKEKWENINKYFRKTKDVNKKRSLDSRTCPYFHQLSTLYNQGIL 1338
Y RNAKRCKEKWENINKY++K K+ NKKR D++TCPYFH+L LY +L
Sbjct: 477 YNRNAKRCKEKWENINKYYKKVKESNKKRPQDAKTCPYFHRLDLLYRNKVL 527
Score = 86 bits (212), Expect = 4e-017
Identities = 44/113 (38%), Positives = 63/113 (55%), Gaps = 12/113 (10%)
Frame = +1
Query: 1033 GKRWPRDEVLALINLRCSLFNNXXXXXXXXXXXAVKAPLWERISQGMSELGYKRNAKRCK 1212
G RWPR+E LAL+ +R + +KAPLWE +S+ + ELGYKR++K+CK
Sbjct: 60 GNRWPREETLALLRIRSDM-------DSTFRDATLKAPLWEHVSRKLLELGYKRSSKKCK 112
Query: 1213 EKWENINKYFRKTKDVNKKRSLDSRTCPYFHQLSTLYNQGILVPPSDHQAAAP 1371
EK+EN+ KY+++TK+ R D + +F QL L PPS P
Sbjct: 113 EKFENVQKYYKRTKETRGGRH-DGKAYKFFSQLEALNT----TPPSSSLDVTP 160
Score = 70 bits (171), Expect = 2e-012
Identities = 34/59 (57%), Positives = 43/59 (72%), Gaps = 5/59 (8%)
Frame = +2
Query: 26 WSNDELLALLRIRSTMENWFPEFT-----WEHVSRKLAEVGFKRSAEKCKEKFEEESRY 187
W +E LALLRIRS M++ F + T WEHVSRKL E+G+KRS++KCKEKFE +Y
Sbjct: 63 WPREETLALLRIRSDMDSTFRDATLKAPLWEHVSRKLLELGYKRSSKKCKEKFENVQKY 121
Score = 49 bits (115), Expect = 8e-006
Identities = 22/62 (35%), Positives = 37/62 (59%), Gaps = 5/62 (8%)
Frame = +2
Query: 17 SDPWSNDELLALLRIRSTMENWFPE-----FTWEHVSRKLAEVGFKRSAEKCKEKFEEES 181
S W E+LAL+ +RS ME + + WE +S + +G+ R+A++CKEK+E +
Sbjct: 433 SSRWPKAEILALINLRSGMEPRYQDNVPKGLLWEEISTSMKRMGYNRNAKRCKEKWENIN 492
Query: 182 RY 187
+Y
Sbjct: 493 KY 494
>TAIR9_protein||AT5G47660.1 | Symbols: | DNA-binding protein-related |
chr5:19313008-19314636 FORWARD
Length = 399
Score = 70 bits (170), Expect = 3e-012
Identities = 29/62 (46%), Positives = 42/62 (67%)
Frame = +1
Query: 1138 KAPLWERISQGMSELGYKRNAKRCKEKWENINKYFRKTKDVNKKRSLDSRTCPYFHQLST 1317
K +W+ IS M E GY+R+AK+CKEKWEN+NKY+R+ + +K+ S+T YF +L
Sbjct: 327 KGAIWDEISARMKERGYERSAKKCKEKWENMNKYYRRVTEGGQKQPEHSKTRSYFEKLGN 386
Query: 1318 LY 1323
Y
Sbjct: 387 FY 388
>TAIR9_protein||AT5G03680.1 | Symbols: PTL | PTL (PETAL LOSS); transcription
factor | chr5:957858-960760 FORWARD
Length = 592
Score = 61 bits (147), Expect = 2e-009
Identities = 30/63 (47%), Positives = 43/63 (68%), Gaps = 2/63 (3%)
Frame = +1
Query: 1138 KAPLWERISQGMS-ELGYKRNAKRCKEKWENINKYFRKTKDVNKKRSLDSRTCPYFHQLS 1314
K PLW+ +S+ MS E GY+R+ K+C+EK+EN+ KY+RKTK+ K D + +F QL
Sbjct: 145 KGPLWDEVSRIMSEEHGYQRSGKKCREKFENLYKYYRKTKE-GKAGRQDGKHYRFFRQLE 203
Query: 1315 TLY 1323
LY
Sbjct: 204 ALY 206
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 718,079,018
Number of Sequences: 33410
Number of Extensions: 718079018
Number of Successful Extensions: 41143207
Number of sequences better than 0.0: 0
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