BLASTX 7.6.2
Query= RU02092 /QuerySize=922
(921 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G10985.1 | Symbols: SAG20, WI12, ATWI-12 | SAG... 119 2e-027
TAIR9_protein||AT5G01740.1 | Symbols: | FUNCTIONS IN: molecular... 98 7e-021
>TAIR9_protein||AT3G10985.1 | Symbols: SAG20, WI12, ATWI-12 | SAG20 (SENESCENCE
ASSOCIATED GENE 20) | chr3:3442776-3443108 FORWARD
Length = 111
Score = 119 bits (298), Expect = 2e-027
Identities = 63/115 (54%), Positives = 75/115 (65%), Gaps = 7/115 (6%)
Frame = -3
Query: 652 RLLTGCDNKNDASFQFNPQSICSVGPVVLVEGCDPEQEISWVHAWTVTDGIITQVREYFN 473
R+LTG + + +SF+F P S+ S G V+ EGCD ISW+HAWTV +GIITQVREY N
Sbjct: 2 RVLTGGVSPSSSSFEFVPLSVVSFGSTVIAEGCDAATSISWIHAWTVANGIITQVREYSN 61
Query: 472 TSLTVTRLGNSTSSAKPKFSKSTSEITSYHCPSVWES--SNRVGKSVPGLVLAI* 314
TSLTVTR+GN + +S HC SVWES S R GK VPGLVLAI*
Sbjct: 62 TSLTVTRIGNVVAG-----RRSAEIAPPSHCSSVWESQFSGRAGKPVPGLVLAI* 111
>TAIR9_protein||AT5G01740.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 18 plant structures;
EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s:
Wound-induced protein, Wun1 (InterPro:IPR009798); BEST Arabidopsis
thaliana protein match is: SAG20 (SENESCENCE ASSOCIATED GENE 20)
(TAIR:AT3G10985.1); Has 49 Blast hits to 49 proteins in 12 species:
Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 45; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr5:280793-281281
FORWARD
Length = 163
Score = 98 bits (242), Expect = 7e-021
Identities = 51/111 (45%), Positives = 69/111 (62%), Gaps = 5/111 (4%)
Frame = -3
Query: 778 NHRLVLKLYDALSTRDVATVHAVLAADLEWWFHGPPTHQFLKRLLTGCDNKNDASFQFNP 599
N + LY AL D +TV V+A+D+EWWFHGP Q + RLLTG + SF+F P
Sbjct: 18 NQGTIELLYKALQQGDTSTVTKVVASDVEWWFHGPHDCQHMMRLLTG-EPPRQVSFRFEP 76
Query: 598 QSICSVGP---VVLVEGCDPEQEISWVHAWTVTDGIITQVREYFNTSLTVT 455
S+ V P V+ EG + + + WVH W + DG++T++REYFNT LTVT
Sbjct: 77 SSVQVVVPGHDCVIAEGWEGSR-VYWVHVWKLKDGVVTELREYFNTWLTVT 126
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 747,274,820
Number of Sequences: 33410
Number of Extensions: 747274820
Number of Successful Extensions: 41161775
Number of sequences better than 0.0: 0
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