BLASTX 7.6.2
Query= RU02099 /QuerySize=1015
(1014 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G61030.1 | Symbols: GR-RBP3 | GR-RBP3 (glycine... 170 2e-042
TAIR9_protein||AT1G74230.1 | Symbols: GR-RBP5 | GR-RBP5 (glycine... 133 2e-031
TAIR9_protein||AT4G13850.1 | Symbols: ATGRP2, GR-RBP2, GRP2 | GR... 105 5e-023
TAIR9_protein||AT4G13850.2 | Symbols: ATGRP2 | GR-RBP2 (GLYCINE-... 105 5e-023
TAIR9_protein||AT4G13850.3 | Symbols: ATGRP2 | GR-RBP2 (GLYCINE-... 105 5e-023
TAIR9_protein||AT4G13850.4 | Symbols: ATGRP2 | GR-RBP2 (GLYCINE-... 105 5e-023
TAIR9_protein||AT3G23830.1 | Symbols: GR-RBP4, GRP4 | GRP4 (GLYC... 103 2e-022
TAIR9_protein||AT3G23830.2 | Symbols: GR-RBP4, GRP4 | GRP4 (GLYC... 103 2e-022
TAIR9_protein||AT3G08000.1 | Symbols: | RNA-binding protein, pu... 96 4e-020
TAIR9_protein||AT2G37220.1 | Symbols: | 29 kDa ribonucleoprotei... 91 1e-018
TAIR9_protein||AT5G06210.1 | Symbols: | RNA-binding protein, pu... 90 2e-018
TAIR9_protein||AT4G24770.1 | Symbols: RBP31, ATRBP31, CP31, ATRB... 89 4e-018
TAIR9_protein||AT5G47320.1 | Symbols: RPS19 | RPS19 (RIBOSOMAL P... 88 9e-018
TAIR9_protein||AT2G21660.1 | Symbols: ATGRP7, CCR2, GR-RBP7, GRP... 87 2e-017
TAIR9_protein||AT2G21660.2 | Symbols: ATGRP7, CCR2 | CCR2 (COLD,... 87 2e-017
TAIR9_protein||AT3G53460.1 | Symbols: CP29 | CP29; RNA binding /... 86 3e-017
TAIR9_protein||AT3G53460.2 | Symbols: CP29 | CP29; RNA binding /... 86 3e-017
TAIR9_protein||AT5G50250.1 | Symbols: | 31 kDa ribonucleoprotei... 84 1e-016
TAIR9_protein||AT1G18630.1 | Symbols: GR-RBP6 | GR-RBP6 (glycine... 82 6e-016
TAIR9_protein||AT4G13860.1 | Symbols: | glycine-rich RNA-bindin... 81 1e-015
TAIR9_protein||AT1G60000.1 | Symbols: | 29 kDa ribonucleoprotei... 80 1e-015
TAIR9_protein||AT4G39260.1 | Symbols: CCR1, ATGRP8, GR-RBP8, GRP... 79 3e-015
TAIR9_protein||AT4G39260.2 | Symbols: CCR1, ATGRP8, GRP8 | GR-RB... 79 3e-015
TAIR9_protein||AT4G39260.3 | Symbols: CCR1, ATGRP8, GRP8 | GR-RB... 79 3e-015
TAIR9_protein||AT2G37510.1 | Symbols: | RNA-binding protein, pu... 78 7e-015
TAIR9_protein||AT3G26420.1 | Symbols: ATRZ-1A | ATRZ-1A; RNA bin... 78 7e-015
TAIR9_protein||AT5G54580.1 | Symbols: | RNA recognition motif (... 76 3e-014
TAIR9_protein||AT1G60650.1 | Symbols: | glycine-rich RNA-bindin... 73 3e-013
>TAIR9_protein||AT5G61030.1 | Symbols: GR-RBP3 | GR-RBP3 (glycine-rich
RNA-binding protein 3); ATP binding / RNA binding |
chr5:24560870-24562152 FORWARD
Length = 310
Score = 170 bits (429), Expect = 2e-042
Identities = 84/119 (70%), Positives = 101/119 (84%), Gaps = 3/119 (2%)
Frame = +1
Query: 121 LSKFGNILRQTATRQIRSELAPSKPSIFQAIRCMSTGPSSKLFIGGVSFQSDEQSLREEF 300
LSKFGNIL+QT +Q+ ++++ S PS+FQAIRCMS SSKLFIGG+++ DE SLRE F
Sbjct: 4 LSKFGNILKQTTNKQLNAQVSLSSPSLFQAIRCMS---SSKLFIGGMAYSMDEDSLREAF 60
Query: 301 AKYGEVVDVRIITDRDTGRSRGFGFVTYTSSEEASSAIQALDGQELHGRRVRVNYATDR 477
KYGEVVD R+I DR+TGRSRGFGFVT+TSSE ASSAIQALDG++LHGR V+VNYA DR
Sbjct: 61 TKYGEVVDTRVILDRETGRSRGFGFVTFTSSEAASSAIQALDGRDLHGRVVKVNYANDR 119
>TAIR9_protein||AT1G74230.1 | Symbols: GR-RBP5 | GR-RBP5 (glycine-rich
RNA-binding protein 5); ATP binding / RNA binding |
chr1:27915346-27916857 FORWARD
Length = 290
Score = 133 bits (333), Expect = 2e-031
Identities = 65/94 (69%), Positives = 82/94 (87%), Gaps = 4/94 (4%)
Frame = +1
Query: 196 SIFQAIRCMSTGPSSKLFIGGVSFQSDEQSLREEFAKYGEVVDVRIITDRDTGRSRGFGF 375
S+ Q+IRCMS SSK+F+GG+S+ +DE LRE F+KYGEVVD +II DR+TGRSRGF F
Sbjct: 23 SMLQSIRCMS---SSKIFVGGISYSTDEFGLREAFSKYGEVVDAKIIVDRETGRSRGFAF 79
Query: 376 VTYTSSEEASSAIQALDGQELHGRRVRVNYATDR 477
VT+TS+EEAS+A+Q LDGQ+LHGRR+RVNYAT+R
Sbjct: 80 VTFTSTEEASNAMQ-LDGQDLHGRRIRVNYATER 112
>TAIR9_protein||AT4G13850.1 | Symbols: ATGRP2, GR-RBP2, GRP2 | GR-RBP2
(GLYCINE-RICH RNA-BINDING PROTEIN 2); ATP binding / RNA binding /
double-stranded DNA binding / single-stranded DNA binding |
chr4:8021314-8022065 FORWARD
Length = 159
Score = 105 bits (261), Expect = 5e-023
Identities = 51/95 (53%), Positives = 71/95 (74%), Gaps = 4/95 (4%)
Frame = +1
Query: 196 SIFQAIRCMSTGPSSKLFIGGVSFQSDEQSLREEFAKYGEVVDVRIITDRDTGRSRGFGF 375
S+ ++R MST KLFIGG+S+ +D+ SLR+ FA +G+VVD ++I DR+TGRSRGFGF
Sbjct: 25 SMLGSLRLMST----KLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGF 80
Query: 376 VTYTSSEEASSAIQALDGQELHGRRVRVNYATDRP 480
V + A++AI +DG+EL+GR +RVN A DRP
Sbjct: 81 VNFNDEGAATAAISEMDGKELNGRHIRVNPANDRP 115
>TAIR9_protein||AT4G13850.2 | Symbols: ATGRP2 | GR-RBP2 (GLYCINE-RICH
RNA-BINDING PROTEIN 2); ATP binding / RNA binding / double-stranded DNA
binding / single-stranded DNA binding | chr4:8021314-8022065 FORWARD
Length = 154
Score = 105 bits (261), Expect = 5e-023
Identities = 51/95 (53%), Positives = 71/95 (74%), Gaps = 4/95 (4%)
Frame = +1
Query: 196 SIFQAIRCMSTGPSSKLFIGGVSFQSDEQSLREEFAKYGEVVDVRIITDRDTGRSRGFGF 375
S+ ++R MST KLFIGG+S+ +D+ SLR+ FA +G+VVD ++I DR+TGRSRGFGF
Sbjct: 25 SMLGSLRLMST----KLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGF 80
Query: 376 VTYTSSEEASSAIQALDGQELHGRRVRVNYATDRP 480
V + A++AI +DG+EL+GR +RVN A DRP
Sbjct: 81 VNFNDEGAATAAISEMDGKELNGRHIRVNPANDRP 115
>TAIR9_protein||AT4G13850.3 | Symbols: ATGRP2 | GR-RBP2 (GLYCINE-RICH
RNA-BINDING PROTEIN 2); ATP binding / RNA binding / double-stranded DNA
binding / single-stranded DNA binding | chr4:8021314-8022065 FORWARD
Length = 145
Score = 105 bits (261), Expect = 5e-023
Identities = 51/95 (53%), Positives = 71/95 (74%), Gaps = 4/95 (4%)
Frame = +1
Query: 196 SIFQAIRCMSTGPSSKLFIGGVSFQSDEQSLREEFAKYGEVVDVRIITDRDTGRSRGFGF 375
S+ ++R MST KLFIGG+S+ +D+ SLR+ FA +G+VVD ++I DR+TGRSRGFGF
Sbjct: 25 SMLGSLRLMST----KLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGF 80
Query: 376 VTYTSSEEASSAIQALDGQELHGRRVRVNYATDRP 480
V + A++AI +DG+EL+GR +RVN A DRP
Sbjct: 81 VNFNDEGAATAAISEMDGKELNGRHIRVNPANDRP 115
>TAIR9_protein||AT4G13850.4 | Symbols: ATGRP2 | GR-RBP2 (GLYCINE-RICH
RNA-BINDING PROTEIN 2); ATP binding / RNA binding / double-stranded DNA
binding / single-stranded DNA binding | chr4:8021314-8022065 FORWARD
Length = 130
Score = 105 bits (261), Expect = 5e-023
Identities = 51/95 (53%), Positives = 71/95 (74%), Gaps = 4/95 (4%)
Frame = +1
Query: 196 SIFQAIRCMSTGPSSKLFIGGVSFQSDEQSLREEFAKYGEVVDVRIITDRDTGRSRGFGF 375
S+ ++R MST KLFIGG+S+ +D+ SLR+ FA +G+VVD ++I DR+TGRSRGFGF
Sbjct: 25 SMLGSLRLMST----KLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGF 80
Query: 376 VTYTSSEEASSAIQALDGQELHGRRVRVNYATDRP 480
V + A++AI +DG+EL+GR +RVN A DRP
Sbjct: 81 VNFNDEGAATAAISEMDGKELNGRHIRVNPANDRP 115
>TAIR9_protein||AT3G23830.1 | Symbols: GR-RBP4, GRP4 | GRP4 (GLYCINE-RICH
RNA-BINDING PROTEIN 4); RNA binding / double-stranded DNA binding /
single-stranded DNA binding | chr3:8606762-8607677 REVERSE
Length = 137
Score = 103 bits (256), Expect = 2e-022
Identities = 46/89 (51%), Positives = 72/89 (80%), Gaps = 3/89 (3%)
Frame = +1
Query: 235 SSKLFIGGVSFQSDEQSLREEFAKYGEVVDVRIITDRDTGRSRGFGFVTYTSSEEASSAI 414
SSKLF+GG+S+ +D+ SL++ F +GEV + +I DR+TGRSRGFGFV+++ + A++AI
Sbjct: 34 SSKLFVGGLSWGTDDSSLKQAFTSFGEVTEATVIADRETGRSRGFGFVSFSCEDSANNAI 93
Query: 415 QALDGQELHGRRVRVNYATDR---PRTNF 492
+ +DG+EL+GR++RVN AT+R PR++F
Sbjct: 94 KEMDGKELNGRQIRVNLATERSSAPRSSF 122
>TAIR9_protein||AT3G23830.2 | Symbols: GR-RBP4, GRP4 | GRP4 (GLYCINE-RICH
RNA-BINDING PROTEIN 4); RNA binding / double-stranded DNA binding /
single-stranded DNA binding | chr3:8606762-8607677 REVERSE
Length = 137
Score = 103 bits (256), Expect = 2e-022
Identities = 46/89 (51%), Positives = 72/89 (80%), Gaps = 3/89 (3%)
Frame = +1
Query: 235 SSKLFIGGVSFQSDEQSLREEFAKYGEVVDVRIITDRDTGRSRGFGFVTYTSSEEASSAI 414
SSKLF+GG+S+ +D+ SL++ F +GEV + +I DR+TGRSRGFGFV+++ + A++AI
Sbjct: 34 SSKLFVGGLSWGTDDSSLKQAFTSFGEVTEATVIADRETGRSRGFGFVSFSCEDSANNAI 93
Query: 415 QALDGQELHGRRVRVNYATDR---PRTNF 492
+ +DG+EL+GR++RVN AT+R PR++F
Sbjct: 94 KEMDGKELNGRQIRVNLATERSSAPRSSF 122
>TAIR9_protein||AT3G08000.1 | Symbols: | RNA-binding protein, putative |
chr3:2555034-2555829 REVERSE
Length = 144
Score = 96 bits (236), Expect = 4e-020
Identities = 46/87 (52%), Positives = 64/87 (73%)
Frame = +1
Query: 223 STGPSSKLFIGGVSFQSDEQSLREEFAKYGEVVDVRIITDRDTGRSRGFGFVTYTSSEEA 402
S PSSKLFIGG+S+ DEQSL++ F+ +GEV +VRI D+ +GRSRGFGFV + +A
Sbjct: 36 SASPSSKLFIGGLSWSVDEQSLKDAFSSFGEVAEVRIAYDKGSGRSRGFGFVDFAEEGDA 95
Query: 403 SSAIQALDGQELHGRRVRVNYATDRPR 483
SA A+DG+ L GR +R+++A +R R
Sbjct: 96 LSAKDAMDGKGLLGRPLRISFALERVR 122
>TAIR9_protein||AT2G37220.1 | Symbols: | 29 kDa ribonucleoprotein, chloroplast,
putative / RNA-binding protein cp29, putative | chr2:15634980-15636331
REVERSE
Length = 290
Score = 91 bits (223), Expect = 1e-018
Identities = 40/84 (47%), Positives = 64/84 (76%)
Frame = +1
Query: 229 GPSSKLFIGGVSFQSDEQSLREEFAKYGEVVDVRIITDRDTGRSRGFGFVTYTSSEEASS 408
G +++++G +S+ D+ +L F++ G+VV+ R+I DRD+GRS+GFGFVTY SS+E +
Sbjct: 201 GSGNRVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQN 260
Query: 409 AIQALDGQELHGRRVRVNYATDRP 480
AI++LDG +L GR++RV+ A RP
Sbjct: 261 AIKSLDGADLDGRQIRVSEAEARP 284
>TAIR9_protein||AT5G06210.1 | Symbols: | RNA-binding protein, putative |
chr5:1878497-1879515 FORWARD
Length = 147
Score = 90 bits (221), Expect = 2e-018
Identities = 42/80 (52%), Positives = 61/80 (76%)
Frame = +1
Query: 229 GPSSKLFIGGVSFQSDEQSLREEFAKYGEVVDVRIITDRDTGRSRGFGFVTYTSSEEASS 408
G +SKLFIGG+SF + EQ L E F+K G+VV+ +I+ DR + RS+GFGFVT+ S++EA
Sbjct: 31 GVASKLFIGGLSFCTTEQGLSEAFSKCGQVVEAQIVMDRVSDRSKGFGFVTFASADEAQK 90
Query: 409 AIQALDGQELHGRRVRVNYA 468
A+ +GQ+L+GR + V+YA
Sbjct: 91 ALMEFNGQQLNGRTIFVDYA 110
>TAIR9_protein||AT4G24770.1 | Symbols: RBP31, ATRBP31, CP31, ATRBP33 | RBP31
(31-KDA RNA BINDING PROTEIN); RNA binding / poly(U) binding |
chr4:12766223-12767952 REVERSE
Length = 330
Score = 89 bits (219), Expect = 4e-018
Identities = 39/83 (46%), Positives = 60/83 (72%)
Frame = +1
Query: 232 PSSKLFIGGVSFQSDEQSLREEFAKYGEVVDVRIITDRDTGRSRGFGFVTYTSSEEASSA 411
P+ ++++G + + D L + F+++G+VV+ R++ DR+TGRSRGFGFVT + +E + A
Sbjct: 242 PAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEA 301
Query: 412 IQALDGQELHGRRVRVNYATDRP 480
I ALDGQ L GR +RVN A +RP
Sbjct: 302 ISALDGQNLEGRAIRVNVAEERP 324
>TAIR9_protein||AT5G47320.1 | Symbols: RPS19 | RPS19 (RIBOSOMAL PROTEIN S19);
RNA binding | chr5:19203801-19204951 FORWARD
Length = 213
Score = 88 bits (216), Expect = 9e-018
Identities = 44/95 (46%), Positives = 67/95 (70%), Gaps = 4/95 (4%)
Frame = +1
Query: 196 SIFQAIRCMSTGPSSKLFIGGVSFQSDEQSLREEFAKYGEVVDVRIITDRDTGRSRGFGF 375
S+ ++R MST KL+IGG+S +DE SL++ F+ + V + R++T++ TGRSRG+GF
Sbjct: 21 SMLGSLRYMST----KLYIGGLSPGTDEHSLKDAFSSFNGVTEARVMTNKVTGRSRGYGF 76
Query: 376 VTYTSSEEASSAIQALDGQELHGRRVRVNYATDRP 480
V + S + A+SAI A++GQEL+G + VN A D P
Sbjct: 77 VNFISEDSANSAISAMNGQELNGFNISVNVAKDWP 111
>TAIR9_protein||AT2G21660.1 | Symbols: ATGRP7, CCR2, GR-RBP7, GRP7 | CCR2 (COLD,
CIRCADIAN RHYTHM, AND RNA BINDING 2); RNA binding / double-stranded DNA
binding / single-stranded DNA binding | chr2:9265477-9266316 REVERSE
Length = 177
Score = 87 bits (213), Expect = 2e-017
Identities = 37/79 (46%), Positives = 58/79 (73%)
Frame = +1
Query: 241 KLFIGGVSFQSDEQSLREEFAKYGEVVDVRIITDRDTGRSRGFGFVTYTSSEEASSAIQA 420
+ F+GG+++ +D+++L FA+YG+V+D +II DR+TGRSRGFGFVT+ + AI+
Sbjct: 9 RCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIEG 68
Query: 421 LDGQELHGRRVRVNYATDR 477
++GQ+L GR + VN A R
Sbjct: 69 MNGQDLDGRSITVNEAQSR 87
>TAIR9_protein||AT2G21660.2 | Symbols: ATGRP7, CCR2 | CCR2 (COLD, CIRCADIAN
RHYTHM, AND RNA BINDING 2); RNA binding / double-stranded DNA binding /
single-stranded DNA binding | chr2:9265477-9266316 REVERSE
Length = 160
Score = 87 bits (213), Expect = 2e-017
Identities = 37/79 (46%), Positives = 58/79 (73%)
Frame = +1
Query: 241 KLFIGGVSFQSDEQSLREEFAKYGEVVDVRIITDRDTGRSRGFGFVTYTSSEEASSAIQA 420
+ F+GG+++ +D+++L FA+YG+V+D +II DR+TGRSRGFGFVT+ + AI+
Sbjct: 9 RCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIEG 68
Query: 421 LDGQELHGRRVRVNYATDR 477
++GQ+L GR + VN A R
Sbjct: 69 MNGQDLDGRSITVNEAQSR 87
>TAIR9_protein||AT3G53460.1 | Symbols: CP29 | CP29; RNA binding / poly(U)
binding | chr3:19819738-19821423 REVERSE
Length = 343
Score = 86 bits (211), Expect = 3e-017
Identities = 39/85 (45%), Positives = 62/85 (72%)
Frame = +1
Query: 226 TGPSSKLFIGGVSFQSDEQSLREEFAKYGEVVDVRIITDRDTGRSRGFGFVTYTSSEEAS 405
+G ++L++G +S+ D+ +L F + G+VV+ R+I DRD+GRS+GFGFVT +SS+E
Sbjct: 253 SGSGNRLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQ 312
Query: 406 SAIQALDGQELHGRRVRVNYATDRP 480
AI +L+G +L GR++RV+ A RP
Sbjct: 313 KAINSLNGADLDGRQIRVSEAEARP 337
Score = 74 bits (180), Expect = 1e-013
Identities = 38/87 (43%), Positives = 50/87 (57%)
Frame = +1
Query: 223 STGPSSKLFIGGVSFQSDEQSLREEFAKYGEVVDVRIITDRDTGRSRGFGFVTYTSSEEA 402
S P KLF+G +SF D L + F G V V +I D+ TGRSRGFGFVT +++ E
Sbjct: 94 SFSPDLKLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEV 153
Query: 403 SSAIQALDGQELHGRRVRVNYATDRPR 483
+A Q +G E GR +RVN P+
Sbjct: 154 EAAAQQFNGYEFEGRPLRVNAGPPPPK 180
>TAIR9_protein||AT3G53460.2 | Symbols: CP29 | CP29; RNA binding / poly(U)
binding | chr3:19819738-19821423 REVERSE
Length = 343
Score = 86 bits (211), Expect = 3e-017
Identities = 39/85 (45%), Positives = 62/85 (72%)
Frame = +1
Query: 226 TGPSSKLFIGGVSFQSDEQSLREEFAKYGEVVDVRIITDRDTGRSRGFGFVTYTSSEEAS 405
+G ++L++G +S+ D+ +L F + G+VV+ R+I DRD+GRS+GFGFVT +SS+E
Sbjct: 253 SGSGNRLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQ 312
Query: 406 SAIQALDGQELHGRRVRVNYATDRP 480
AI +L+G +L GR++RV+ A RP
Sbjct: 313 KAINSLNGADLDGRQIRVSEAEARP 337
Score = 74 bits (180), Expect = 1e-013
Identities = 38/87 (43%), Positives = 50/87 (57%)
Frame = +1
Query: 223 STGPSSKLFIGGVSFQSDEQSLREEFAKYGEVVDVRIITDRDTGRSRGFGFVTYTSSEEA 402
S P KLF+G +SF D L + F G V V +I D+ TGRSRGFGFVT +++ E
Sbjct: 94 SFSPDLKLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEV 153
Query: 403 SSAIQALDGQELHGRRVRVNYATDRPR 483
+A Q +G E GR +RVN P+
Sbjct: 154 EAAAQQFNGYEFEGRPLRVNAGPPPPK 180
>TAIR9_protein||AT5G50250.1 | Symbols: | 31 kDa ribonucleoprotein, chloroplast,
putative / RNA-binding protein RNP-T, putative / RNA-binding protein
1/2/3, putative / RNA-binding protein cp31, putative |
chr5:20452677-20453965 REVERSE
Length = 290
Score = 84 bits (206), Expect = 1e-016
Identities = 37/81 (45%), Positives = 57/81 (70%)
Frame = +1
Query: 241 KLFIGGVSFQSDEQSLREEFAKYGEVVDVRIITDRDTGRSRGFGFVTYTSSEEASSAIQA 420
++++G + + D L F+++G+VVD R+++DR+TGRSRGFGFV ++ E + AI A
Sbjct: 208 RIYVGNLPWDVDSGRLERLFSEHGKVVDARVVSDRETGRSRGFGFVQMSNENEVNVAIAA 267
Query: 421 LDGQELHGRRVRVNYATDRPR 483
LDGQ L GR ++VN A +R R
Sbjct: 268 LDGQNLEGRAIKVNVAEERTR 288
>TAIR9_protein||AT1G18630.1 | Symbols: GR-RBP6 | GR-RBP6 (glycine-rich
RNA-binding protein 6); RNA binding / nucleic acid binding / nucleotide
binding | chr1:6415226-6416283 FORWARD
Length = 156
Score = 82 bits (200), Expect = 6e-016
Identities = 42/97 (43%), Positives = 63/97 (64%), Gaps = 4/97 (4%)
Frame = +1
Query: 190 KPSIFQAIRCMSTG----PSSKLFIGGVSFQSDEQSLREEFAKYGEVVDVRIITDRDTGR 357
+P QA M G SK+F+GG+S +D + L+E F +G++VD ++ DR++G
Sbjct: 16 QPRALQASNAMLQGNLSLTPSKIFVGGLSPSTDVELLKEAFGSFGKIVDAVVVLDRESGL 75
Query: 358 SRGFGFVTYTSSEEASSAIQALDGQELHGRRVRVNYA 468
SRGFGFVTY S E A++A+QA+ +EL GR + V+ A
Sbjct: 76 SRGFGFVTYDSIEVANNAMQAMQNKELDGRIIGVHPA 112
>TAIR9_protein||AT4G13860.1 | Symbols: | glycine-rich RNA-binding protein,
putative | chr4:8022601-8023162 FORWARD
Length = 88
Score = 81 bits (198), Expect = 1e-015
Identities = 37/75 (49%), Positives = 55/75 (73%)
Frame = +1
Query: 235 SSKLFIGGVSFQSDEQSLREEFAKYGEVVDVRIITDRDTGRSRGFGFVTYTSSEEASSAI 414
++++++G +S + + LRE F+ YG VVD ++ DR T RSRGFGFVTY+S EA +A+
Sbjct: 2 ATRVYVGNLSPTTTDDMLREAFSGYGNVVDAIVMRDRYTDRSRGFGFVTYSSHSEAEAAV 61
Query: 415 QALDGQELHGRRVRV 459
+DG+EL+GRRV V
Sbjct: 62 SGMDGKELNGRRVSV 76
>TAIR9_protein||AT1G60000.1 | Symbols: | 29 kDa ribonucleoprotein, chloroplast,
putative / RNA-binding protein cp29, putative | chr1:22093678-22094540
REVERSE
Length = 259
Score = 80 bits (197), Expect = 1e-015
Identities = 38/76 (50%), Positives = 53/76 (69%)
Frame = +1
Query: 241 KLFIGGVSFQSDEQSLREEFAKYGEVVDVRIITDRDTGRSRGFGFVTYTSSEEASSAIQA 420
KLF+G +S+ +SL F + G+VV R++ D DTGRSRG+GFV Y+S E +A+++
Sbjct: 178 KLFVGNLSWTVTSESLAGAFRECGDVVGARVVFDGDTGRSRGYGFVCYSSKAEMETALES 237
Query: 421 LDGQELHGRRVRVNYA 468
LDG EL GR +RVN A
Sbjct: 238 LDGFELEGRAIRVNLA 253
>TAIR9_protein||AT4G39260.1 | Symbols: CCR1, ATGRP8, GR-RBP8, GRP8 | GR-RBP8;
RNA binding / nucleic acid binding / nucleotide binding |
chr4:18274166-18274958 REVERSE
Length = 170
Score = 79 bits (194), Expect = 3e-015
Identities = 33/79 (41%), Positives = 58/79 (73%)
Frame = +1
Query: 241 KLFIGGVSFQSDEQSLREEFAKYGEVVDVRIITDRDTGRSRGFGFVTYTSSEEASSAIQA 420
+ F+GG+++ ++++ L+ F+++G+V+D +II DR++GRSRGFGFVT+ + AI+
Sbjct: 7 RCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEE 66
Query: 421 LDGQELHGRRVRVNYATDR 477
++G+EL GR + VN A R
Sbjct: 67 MNGKELDGRVITVNEAQSR 85
>TAIR9_protein||AT4G39260.2 | Symbols: CCR1, ATGRP8, GRP8 | GR-RBP8; RNA binding
/ nucleic acid binding / nucleotide binding | chr4:18274166-18274958
REVERSE
Length = 127
Score = 79 bits (194), Expect = 3e-015
Identities = 33/79 (41%), Positives = 58/79 (73%)
Frame = +1
Query: 241 KLFIGGVSFQSDEQSLREEFAKYGEVVDVRIITDRDTGRSRGFGFVTYTSSEEASSAIQA 420
+ F+GG+++ ++++ L+ F+++G+V+D +II DR++GRSRGFGFVT+ + AI+
Sbjct: 7 RCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEE 66
Query: 421 LDGQELHGRRVRVNYATDR 477
++G+EL GR + VN A R
Sbjct: 67 MNGKELDGRVITVNEAQSR 85
>TAIR9_protein||AT4G39260.3 | Symbols: CCR1, ATGRP8, GRP8 | GR-RBP8; RNA binding
/ nucleic acid binding / nucleotide binding | chr4:18274166-18274958
REVERSE
Length = 93
Score = 79 bits (194), Expect = 3e-015
Identities = 33/79 (41%), Positives = 58/79 (73%)
Frame = +1
Query: 241 KLFIGGVSFQSDEQSLREEFAKYGEVVDVRIITDRDTGRSRGFGFVTYTSSEEASSAIQA 420
+ F+GG+++ ++++ L+ F+++G+V+D +II DR++GRSRGFGFVT+ + AI+
Sbjct: 7 RCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEE 66
Query: 421 LDGQELHGRRVRVNYATDR 477
++G+EL GR + VN A R
Sbjct: 67 MNGKELDGRVITVNEAQSR 85
>TAIR9_protein||AT2G37510.1 | Symbols: | RNA-binding protein, putative |
chr2:15743112-15744504 REVERSE
Length = 143
Score = 78 bits (191), Expect = 7e-015
Identities = 43/99 (43%), Positives = 65/99 (65%), Gaps = 4/99 (4%)
Frame = +1
Query: 187 SKPSIFQAIRCMSTGPSSKLFIGGVSFQSDEQSLREEFAKYGEVVDVRIITDRDTGRSRG 366
S PS+ +R ST S +LF+ G+S + + L++ FA +G++VD R+ITDRD+GRS+G
Sbjct: 19 SSPSL--CVRRCSTLTSPRLFVSGLSRLTTNEKLQDAFASFGQLVDARVITDRDSGRSKG 76
Query: 367 FGFVTYTSSEEASSAIQALDGQELHGRRVRVNYATDRPR 483
FGFVTY + E+A A ++ + L G + V+ A RPR
Sbjct: 77 FGFVTYATIEDAEKAKAEMNAKFLDGWVIFVDPA--RPR 113
>TAIR9_protein||AT3G26420.1 | Symbols: ATRZ-1A | ATRZ-1A; RNA binding /
nucleotide binding | chr3:9671953-9673055 FORWARD
Length = 246
Score = 78 bits (191), Expect = 7e-015
Identities = 33/83 (39%), Positives = 56/83 (67%)
Frame = +1
Query: 220 MSTGPSSKLFIGGVSFQSDEQSLREEFAKYGEVVDVRIITDRDTGRSRGFGFVTYTSSEE 399
MS P + FIGG+++ + ++ LR+ F KYG +V+ +++ D+ +GRSRGFGF+T+ +
Sbjct: 1 MSEDPEYRCFIGGLAWTTSDRGLRDAFEKYGHLVEAKVVLDKFSGRSRGFGFITFDEKKA 60
Query: 400 ASSAIQALDGQELHGRRVRVNYA 468
AI A++G +L GR + V+ A
Sbjct: 61 MDEAIAAMNGMDLDGRTITVDKA 83
>TAIR9_protein||AT5G54580.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr5:22171332-22172656 FORWARD
Length = 157
Score = 76 bits (185), Expect = 3e-014
Identities = 36/84 (42%), Positives = 56/84 (66%), Gaps = 2/84 (2%)
Frame = +1
Query: 232 PSSKLFIGGVSFQSDEQSLREEFAKYGEVVDVRIITDRDTGRSRGFGFVTYTSSEEASSA 411
PS+ LF+ G+S ++ + LR FA++GEV D +++TDR +G S+GFGFV Y + E+++
Sbjct: 54 PSTNLFVSGLSKRTTSEGLRTAFAQFGEVADAKVVTDRVSGYSKGFGFVRYATLEDSAKG 113
Query: 412 IQALDGQELHGRRVRVNYATDRPR 483
I +DG+ L G + YA RPR
Sbjct: 114 IAGMDGKFLDGWVIFAEYA--RPR 135
>TAIR9_protein||AT1G60650.1 | Symbols: | glycine-rich RNA-binding protein,
putative | chr1:22340089-22342148 FORWARD
Length = 293
Score = 73 bits (177), Expect = 3e-013
Identities = 32/77 (41%), Positives = 51/77 (66%)
Frame = +1
Query: 238 SKLFIGGVSFQSDEQSLREEFAKYGEVVDVRIITDRDTGRSRGFGFVTYTSSEEASSAIQ 417
S++F+GG+S+ E+ L F +YG++ + +I+ RDTGR RGFGF+T+T A AI+
Sbjct: 12 SRIFVGGLSWDVTERQLESTFDRYGKITECQIMVGRDTGRPRGFGFITFTDRRGADDAIK 71
Query: 418 ALDGQELHGRRVRVNYA 468
+ G+EL + + VN A
Sbjct: 72 HMHGRELGNKVISVNKA 88
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 747,274,820
Number of Sequences: 33410
Number of Extensions: 747274820
Number of Successful Extensions: 41161775
Number of sequences better than 0.0: 0
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