BLASTX 7.6.2
Query= RU02113 /QuerySize=1406
(1405 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G22490.1 | Symbols: | basic helix-loop-helix ... 149 4e-036
TAIR9_protein||AT3G24140.1 | Symbols: FMA | FMA (FAMA); DNA bind... 134 1e-031
TAIR9_protein||AT1G72210.1 | Symbols: | basic helix-loop-helix ... 91 2e-018
TAIR9_protein||AT5G46690.1 | Symbols: bHLH071 | bHLH071 (beta HL... 91 2e-018
TAIR9_protein||AT4G01460.1 | Symbols: | basic helix-loop-helix ... 88 1e-017
TAIR9_protein||AT2G46810.1 | Symbols: | basic helix-loop-helix ... 87 3e-017
TAIR9_protein||AT3G61950.1 | Symbols: | basic helix-loop-helix ... 82 6e-016
TAIR9_protein||AT3G61950.2 | Symbols: | basic helix-loop-helix ... 82 6e-016
TAIR9_protein||AT5G53210.1 | Symbols: SPCH | SPCH (SPEECHLESS); ... 77 2e-014
TAIR9_protein||AT3G06120.1 | Symbols: MUTE | MUTE (MUTE); DNA bi... 72 8e-013
TAIR9_protein||AT5G65320.1 | Symbols: | basic helix-loop-helix ... 70 3e-012
>TAIR9_protein||AT1G22490.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr1:7938448-7940489 REVERSE
Length = 305
Score = 149 bits (376), Expect = 4e-036
Identities = 88/187 (47%), Positives = 111/187 (59%), Gaps = 18/187 (9%)
Frame = +2
Query: 437 EEAETQRMTHIAVERNRRKQMNEHLAILRSLMPESYAQRGDQASIVGGAIEFVXXXXXXX 616
EE E QRMTHIAVERNRRKQMNE+LA+LRSLMP SYAQRGDQASIVGGAI +V
Sbjct: 108 EEIENQRMTHIAVERNRRKQMNEYLAVLRSLMPSSYAQRGDQASIVGGAINYVKELEHIL 167
Query: 617 XXXXXXXXXXXXXXVVNEDSSTTSNSKVVQPIITPFLQFSEYDIXXXXXXXXXXXXPNKF 796
+ TS S +V P T F F +Y P
Sbjct: 168 QSMEPKRTRTH-----DPKGDKTSTSSLVGP-FTDFFSFPQYSTKSSSDVPESSSSP--- 218
Query: 797 TSKTKADIADIEVTLIETHANLRIVTRRITPRQLSKLVAGVQTLQLTILHLTVNTIYPFV 976
A+IEVT+ E+HAN++I+T++ PRQL KL+ +Q+L+LT+LHL V T++ +
Sbjct: 219 --------AEIEVTVAESHANIKIMTKK-KPRQLLKLITSLQSLRLTLLHLNVTTLHNSI 269
Query: 977 LYSISVK 997
LYSISV+
Sbjct: 270 LYSISVR 276
>TAIR9_protein||AT3G24140.1 | Symbols: FMA | FMA (FAMA); DNA binding /
transcription activator/ transcription factor | chr3:8715525-8717772
REVERSE
Length = 415
Score = 134 bits (337), Expect = 1e-031
Identities = 82/187 (43%), Positives = 108/187 (57%), Gaps = 3/187 (1%)
Frame = +2
Query: 437 EEAETQRMTHIAVERNRRKQMNEHLAILRSLMPESYAQRGDQASIVGGAIEFVXXXXXXX 616
EE E+QRMTHIAVERNRRKQMNEHL +LRSLMP SY QRGDQASI+GGAIEFV
Sbjct: 190 EEVESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRELEQLL 249
Query: 617 XXXXXXXXXXXXXXVVNEDSSTTSNSKVVQPIITPFLQFSEYDIXXXXXXXXXXXXPNKF 796
+ ++TT++S PI T Q I +
Sbjct: 250 QCLESQKRRRILGETGRDMTTTTTSSS--SPITTVANQAQPLIITGNVTELEGGGGLREE 307
Query: 797 TSKTKADIADIEVTLIETHANLRIVTRRITPRQLSKLVAGVQTLQLTILHLTVNTIYPFV 976
T++ K+ +AD+EV L+ A ++I++RR P QL K +A ++ L L+ILH + T+ V
Sbjct: 308 TAENKSCLADVEVKLLGFDAMIKILSRR-RPGQLIKTIAALEDLHLSILHTNITTMEQTV 366
Query: 977 LYSISVK 997
LYS +VK
Sbjct: 367 LYSFNVK 373
>TAIR9_protein||AT1G72210.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein (bHLH096) | chr1:27180066-27182268 FORWARD
Length = 321
Score = 91 bits (224), Expect = 2e-018
Identities = 50/102 (49%), Positives = 60/102 (58%), Gaps = 1/102 (0%)
Frame = +2
Query: 437 EEAETQRMTHIAVERNRRKQMNEHLAILRSLMPESYAQRGDQASIVGGAIEFVXXXXXXX 616
EE E QRMTHIAVERNRRKQMNE+LA+LRSLMP YAQRGDQASIVGGAI ++
Sbjct: 118 EEIENQRMTHIAVERNRRKQMNEYLAVLRSLMPPYYAQRGDQASIVGGAINYLKELEHHL 177
Query: 617 XXXXXXXXXXXXXXVVNEDSSTTSNSKVVQPIITPFLQFSEY 742
D + T+++ P + F F +Y
Sbjct: 178 QSMEPPVKTATEDTGAGHDQTKTTSASSSGP-FSDFFAFPQY 218
Score = 69 bits (166), Expect = 8e-012
Identities = 38/71 (53%), Positives = 55/71 (77%), Gaps = 2/71 (2%)
Frame = +2
Query: 788 NKFTSKTKAD-IADIEVTLIETHANLRIVTRRITPRQLSKLVAGVQTLQLTILHLTVNTI 964
N+ TS A+ +A+IEVT++E+HA+L+I+ ++ PRQL KLV+ +Q+L+LT+LHL V T
Sbjct: 220 NRPTSAAAAEGMAEIEVTMVESHASLKILAKK-RPRQLLKLVSSIQSLRLTLLHLNVTTR 278
Query: 965 YPFVLYSISVK 997
VLYSISVK
Sbjct: 279 DDSVLYSISVK 289
>TAIR9_protein||AT5G46690.1 | Symbols: bHLH071 | bHLH071 (beta HLH protein 71);
DNA binding / transcription factor | chr5:18945639-18947434 FORWARD
Length = 328
Score = 91 bits (224), Expect = 2e-018
Identities = 41/53 (77%), Positives = 50/53 (94%)
Frame = +2
Query: 437 EEAETQRMTHIAVERNRRKQMNEHLAILRSLMPESYAQRGDQASIVGGAIEFV 595
EEAE QRMTHIAVERNRR+QMN+HL++LRSLMP+ +A +GDQASIVGGAI+F+
Sbjct: 81 EEAENQRMTHIAVERNRRRQMNQHLSVLRSLMPQPFAHKGDQASIVGGAIDFI 133
>TAIR9_protein||AT4G01460.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr4:621334-622697 FORWARD
Length = 316
Score = 88 bits (217), Expect = 1e-017
Identities = 42/53 (79%), Positives = 47/53 (88%)
Frame = +2
Query: 437 EEAETQRMTHIAVERNRRKQMNEHLAILRSLMPESYAQRGDQASIVGGAIEFV 595
+E E QRMTHIAVERNRR+QMNEHL LRSLMP S+ QRGDQASIVGGAI+F+
Sbjct: 108 DEVENQRMTHIAVERNRRRQMNEHLNSLRSLMPPSFLQRGDQASIVGGAIDFI 160
Score = 53 bits (125), Expect = 5e-007
Identities = 25/71 (35%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
Frame = +2
Query: 788 NKFTSK-TKADIADIEVTLIETHANLRIVTRRITPRQLSKLVAGVQTLQLTILHLTVNTI 964
N FT++ D ++E T+I+ H +L++ +R RQ+ K + ++ L+L ILHLT+++
Sbjct: 210 NGFTARFGGGDTTEVEATVIQNHVSLKVRCKR-GKRQILKAIVSIEELKLAILHLTISSS 268
Query: 965 YPFVLYSISVK 997
+ FV+YS ++K
Sbjct: 269 FDFVIYSFNLK 279
>TAIR9_protein||AT2G46810.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr2:19239694-19242373 FORWARD
Length = 372
Score = 87 bits (213), Expect = 3e-017
Identities = 42/53 (79%), Positives = 47/53 (88%)
Frame = +2
Query: 437 EEAETQRMTHIAVERNRRKQMNEHLAILRSLMPESYAQRGDQASIVGGAIEFV 595
EE E+QRMTHIAVERNRR+QMN HL LRS++P SY QRGDQASIVGGAI+FV
Sbjct: 186 EEIESQRMTHIAVERNRRRQMNVHLNSLRSIIPSSYIQRGDQASIVGGAIDFV 238
>TAIR9_protein||AT3G61950.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr3:22939661-22941332 FORWARD
Length = 359
Score = 82 bits (202), Expect = 6e-016
Identities = 39/53 (73%), Positives = 45/53 (84%)
Frame = +2
Query: 437 EEAETQRMTHIAVERNRRKQMNEHLAILRSLMPESYAQRGDQASIVGGAIEFV 595
EE E QR+ HIAVERNRR+QMNEH+ LR+L+P SY QRGDQASIVGGAI +V
Sbjct: 171 EEIENQRINHIAVERNRRRQMNEHINSLRALLPPSYIQRGDQASIVGGAINYV 223
>TAIR9_protein||AT3G61950.2 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr3:22940231-22941332 FORWARD
Length = 308
Score = 82 bits (202), Expect = 6e-016
Identities = 39/53 (73%), Positives = 45/53 (84%)
Frame = +2
Query: 437 EEAETQRMTHIAVERNRRKQMNEHLAILRSLMPESYAQRGDQASIVGGAIEFV 595
EE E QR+ HIAVERNRR+QMNEH+ LR+L+P SY QRGDQASIVGGAI +V
Sbjct: 120 EEIENQRINHIAVERNRRRQMNEHINSLRALLPPSYIQRGDQASIVGGAINYV 172
>TAIR9_protein||AT5G53210.1 | Symbols: SPCH | SPCH (SPEECHLESS); DNA binding /
transcription factor | chr5:21586606-21588941 REVERSE
Length = 365
Score = 77 bits (189), Expect = 2e-014
Identities = 33/48 (68%), Positives = 42/48 (87%)
Frame = +2
Query: 452 QRMTHIAVERNRRKQMNEHLAILRSLMPESYAQRGDQASIVGGAIEFV 595
Q+M+H+ VERNRRKQMNEHL +LRSLMP Y +RGDQASI+GG +E++
Sbjct: 100 QKMSHVTVERNRRKQMNEHLTVLRSLMPCFYVKRGDQASIIGGVVEYI 147
>TAIR9_protein||AT3G06120.1 | Symbols: MUTE | MUTE (MUTE); DNA binding /
transcription factor | chr3:1846531-1848016 FORWARD
Length = 203
Score = 72 bits (175), Expect = 8e-013
Identities = 34/46 (73%), Positives = 39/46 (84%)
Frame = +2
Query: 458 MTHIAVERNRRKQMNEHLAILRSLMPESYAQRGDQASIVGGAIEFV 595
M+HIAVERNRR+QMNEHL LRSL P Y +RGDQASI+GG IEF+
Sbjct: 1 MSHIAVERNRRRQMNEHLKSLRSLTPCFYIKRGDQASIIGGVIEFI 46
>TAIR9_protein||AT5G65320.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr5:26107368-26108640 REVERSE
Length = 297
Score = 70 bits (170), Expect = 3e-012
Identities = 33/52 (63%), Positives = 41/52 (78%)
Frame = +2
Query: 440 EAETQRMTHIAVERNRRKQMNEHLAILRSLMPESYAQRGDQASIVGGAIEFV 595
+ E QRM HIAVERNRRKQMN L+IL+S+MP SY+Q DQASI+ G I ++
Sbjct: 96 DKENQRMNHIAVERNRRKQMNHFLSILKSMMPLSYSQPNDQASIIEGTISYL 147
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 747,274,820
Number of Sequences: 33410
Number of Extensions: 747274820
Number of Successful Extensions: 41161775
Number of sequences better than 0.0: 0
|