BLASTX 7.6.2
Query= RU02141 /QuerySize=705
(704 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G04340.1 | Symbols: C2H2, CZF2, ZAT6 | ZAT6 (Z... 86 2e-017
TAIR9_protein||AT3G19580.1 | Symbols: AZF2 | AZF2 (ARABIDOPSIS Z... 82 2e-016
TAIR9_protein||AT3G19580.2 | Symbols: AZF2 | AZF2 (ARABIDOPSIS Z... 82 2e-016
TAIR9_protein||AT1G27730.1 | Symbols: STZ, ZAT10 | STZ (salt tol... 58 6e-009
TAIR9_protein||AT3G49930.1 | Symbols: | zinc finger (C2H2 type)... 54 6e-008
TAIR9_protein||AT5G43170.1 | Symbols: AZF3 | AZF3 (ARABIDOPSIS Z... 54 1e-007
TAIR9_protein||AT3G10470.1 | Symbols: | zinc finger (C2H2 type)... 50 2e-006
TAIR9_protein||AT5G04390.1 | Symbols: | zinc finger (C2H2 type)... 50 2e-006
TAIR9_protein||AT5G67450.1 | Symbols: AZF1 | AZF1 (ARABIDOPSIS Z... 49 2e-006
TAIR9_protein||AT1G49900.1 | Symbols: | zinc finger (C2H2 type)... 49 3e-006
>TAIR9_protein||AT5G04340.1 | Symbols: C2H2, CZF2, ZAT6 | ZAT6 (ZINC FINGER OF
ARABIDOPSIS THALIANA 6); nucleic acid binding / transcription factor/
zinc ion binding | chr5:1216321-1217037 REVERSE
Length = 239
Score = 86 bits (212), Expect = 2e-017
Identities = 43/85 (50%), Gaps = 1/85 (1%)
Frame = +2
Query: 452 PSYKCSVCDKTFPSYQALGGHKASHRKG-GLXXXXXXXXXXXXXXXXXXXXXXXXXXXVG 628
P YKCSVCDK F SYQALGGHKASHRK L V
Sbjct: 87 PIYKCSVCDKAFSSYQALGGHKASHRKSFSLTQSAGGDELSTSSAITTSGISGGGGGSVK 146
Query: 629 PHECSICHKSFPHRPGLGRHKRCHY 703
H CSICHKSF LG HKRCHY
Sbjct: 147 SHVCSICHKSFATGQALGGHKRCHY 171
>TAIR9_protein||AT3G19580.1 | Symbols: AZF2 | AZF2 (ARABIDOPSIS ZINC-FINGER
PROTEIN 2); DNA binding / nucleic acid binding / transcription factor/
transcription repressor/ zinc ion binding | chr3:6803293-6804114
REVERSE
Length = 274
Score = 82 bits (202), Expect = 2e-016
Identities = 43/96 (44%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Frame = +2
Query: 416 QATSAPAKENQLPSYKCSVCDKTFPSYQALGGHKASHRKGGLXXXXXXXXXXXXXXXXXX 595
Q+ + P + LP YKC+VC+K FPSYQALGGHKASHR
Sbjct: 93 QSLTPPPESKNLP-YKCNVCEKAFPSYQALGGHKASHRIKPPTVISTTADDSTAPTISIV 151
Query: 596 XXXXXXXXXVGP-HECSICHKSFPHRPGLGRHKRCH 700
G HECSICHK FP LG HKRCH
Sbjct: 152 AGEKHPIAASGKIHECSICHKVFPTGQALGGHKRCH 187
>TAIR9_protein||AT3G19580.2 | Symbols: AZF2 | AZF2 (ARABIDOPSIS ZINC-FINGER
PROTEIN 2); DNA binding / nucleic acid binding / transcription factor/
transcription repressor/ zinc ion binding | chr3:6803293-6804114
REVERSE
Length = 274
Score = 82 bits (202), Expect = 2e-016
Identities = 43/96 (44%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Frame = +2
Query: 416 QATSAPAKENQLPSYKCSVCDKTFPSYQALGGHKASHRKGGLXXXXXXXXXXXXXXXXXX 595
Q+ + P + LP YKC+VC+K FPSYQALGGHKASHR
Sbjct: 93 QSLTPPPESKNLP-YKCNVCEKAFPSYQALGGHKASHRIKPPTVISTTADDSTAPTISIV 151
Query: 596 XXXXXXXXXVGP-HECSICHKSFPHRPGLGRHKRCH 700
G HECSICHK FP LG HKRCH
Sbjct: 152 AGEKHPIAASGKIHECSICHKVFPTGQALGGHKRCH 187
>TAIR9_protein||AT1G27730.1 | Symbols: STZ, ZAT10 | STZ (salt tolerance zinc
finger); nucleic acid binding / transcription factor/ transcription
repressor/ zinc ion binding | chr1:9648302-9648985 REVERSE
Length = 228
Score = 58 bits (138), Expect = 6e-009
Identities = 25/26 (96%)
Frame = +2
Query: 455 SYKCSVCDKTFPSYQALGGHKASHRK 532
SYKCSVCDKTF SYQALGGHKASHRK
Sbjct: 79 SYKCSVCDKTFSSYQALGGHKASHRK 104
>TAIR9_protein||AT3G49930.1 | Symbols: | zinc finger (C2H2 type) family protein
| chr3:18510246-18510893 FORWARD
Length = 216
Score = 54 bits (129), Expect = 6e-008
Identities = 24/35 (68%), Positives = 28/35 (80%), Gaps = 1/35 (2%)
Frame = +2
Query: 428 APAKENQLPSYKCSVCDKTFPSYQALGGHKASHRK 532
+P ++Q YKCSVC K+FPSYQALGGHK SHRK
Sbjct: 85 SPLSDHQ-KDYKCSVCGKSFPSYQALGGHKTSHRK 118
>TAIR9_protein||AT5G43170.1 | Symbols: AZF3 | AZF3 (ARABIDOPSIS ZINC-FINGER
PROTEIN 3); DNA binding / nucleic acid binding / transcription factor/
transcription repressor/ zinc ion binding | chr5:17331050-17331631
REVERSE
Length = 194
Score = 54 bits (127), Expect = 1e-007
Identities = 23/26 (88%)
Frame = +2
Query: 452 PSYKCSVCDKTFPSYQALGGHKASHR 529
PSYKC VC KTF SYQALGGHKASHR
Sbjct: 73 PSYKCGVCYKTFSSYQALGGHKASHR 98
>TAIR9_protein||AT3G10470.1 | Symbols: | zinc finger (C2H2 type) family protein
| chr3:3260424-3261620 FORWARD
Length = 399
Score = 50 bits (117), Expect = 2e-006
Identities = 18/25 (72%), Positives = 23/25 (92%)
Frame = +2
Query: 458 YKCSVCDKTFPSYQALGGHKASHRK 532
Y+C CD+TFPS+QALGGH+ASH+K
Sbjct: 182 YQCKTCDRTFPSFQALGGHRASHKK 206
>TAIR9_protein||AT5G04390.1 | Symbols: | zinc finger (C2H2 type) family protein
| chr5:1239166-1240254 FORWARD
Length = 363
Score = 50 bits (117), Expect = 2e-006
Identities = 18/25 (72%), Positives = 23/25 (92%)
Frame = +2
Query: 458 YKCSVCDKTFPSYQALGGHKASHRK 532
Y+C CD+TFPS+QALGGH+ASH+K
Sbjct: 153 YQCKTCDRTFPSFQALGGHRASHKK 177
>TAIR9_protein||AT5G67450.1 | Symbols: AZF1 | AZF1 (ARABIDOPSIS ZINC-FINGER
PROTEIN 1); DNA binding / nucleic acid binding / transcription factor/
transcription repressor/ zinc ion binding | chr5:26919142-26919879
REVERSE
Length = 246
Score = 49 bits (116), Expect = 2e-006
Identities = 20/25 (80%), Positives = 22/25 (88%)
Frame = +2
Query: 458 YKCSVCDKTFPSYQALGGHKASHRK 532
YKC+VC K+F SYQALGGHK SHRK
Sbjct: 97 YKCTVCGKSFSSYQALGGHKTSHRK 121
>TAIR9_protein||AT1G49900.1 | Symbols: | zinc finger (C2H2 type) family protein
| chr1:18474108-18477643 REVERSE
Length = 918
Score = 49 bits (115), Expect = 3e-006
Identities = 22/37 (59%), Positives = 27/37 (72%), Gaps = 3/37 (8%)
Frame = +2
Query: 416 QATSAPAKENQLPSYKCSVCDKTFPSYQALGGHKASH 526
Q +AP K + +KCS+C+K F SYQALGGHKASH
Sbjct: 182 QTQTAPPKSD---LFKCSICEKVFTSYQALGGHKASH 215
Score = 48 bits (112), Expect = 6e-006
Identities = 19/25 (76%), Positives = 22/25 (88%)
Frame = +2
Query: 455 SYKCSVCDKTFPSYQALGGHKASHR 529
SY+C+VC + PSYQALGGHKASHR
Sbjct: 749 SYQCNVCGRELPSYQALGGHKASHR 773
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 747,274,820
Number of Sequences: 33410
Number of Extensions: 747274820
Number of Successful Extensions: 41161775
Number of sequences better than 0.0: 0
|