BLASTX 7.6.2
Query= RU02202 /QuerySize=1255
(1254 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G25520.1 | Symbols: ATL5, PGY3, OLI5, RPL5A | ... 451 5e-127
TAIR9_protein||AT5G39740.1 | Symbols: OLI7, RPL5B | 60S ribosoma... 447 1e-125
>TAIR9_protein||AT3G25520.1 | Symbols: ATL5, PGY3, OLI5, RPL5A | ATL5 (A.
THALIANA RIBOSOMAL PROTEIN L5); 5S rRNA binding / structural
constituent of ribosome | chr3:9269573-9271327 REVERSE
Length = 302
Score = 451 bits (1159), Expect = 5e-127
Identities = 221/300 (73%), Positives = 247/300 (82%)
Frame = +3
Query: 57 MAFIKASKPRAYFKRFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI 236
M F+K++K AYFKR+QVK++RRR+GKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI
Sbjct: 1 MVFVKSTKSNAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI 60
Query: 237 VAQIISATISGDLVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKKLEMDAEYE 416
VAQI+SA+I+GD+V ASAYAHELP+YGL VGLTNYAAAYCTGLLLARRVLK LEMD EYE
Sbjct: 61 VAQIVSASIAGDIVKASAYAHELPQYGLTVGLTNYAAAYCTGLLLARRVLKMLEMDDEYE 120
Query: 417 GNVEATGEDYSVEPGESRRPFRALLDVGLVKTTTGNRVFXXXXXXXXXXXXVPHSEKRFA 596
GNVEATGED+SVEP +SRRPFRALLDVGL++TTTGNRVF +PHS+KRFA
Sbjct: 121 GNVEATGEDFSVEPTDSRRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFA 180
Query: 597 GFSKDSKQLDAEVHRKYIYGGHVAAYMGTLIEDEPEKYQTHFSXXXXXXXXXXXXXXLYK 776
GF K++KQLDAE+HR YIYGGHV+ YM L EDEPEK QTHFS LYK
Sbjct: 181 GFHKENKQLDAEIHRNYIYGGHVSNYMKLLGEDEPEKLQTHFSAYIKKGVEAESIEELYK 240
Query: 777 KVHAAIRADPLEKKTAKPEPKAHKRFNLKKLTYEERKNKLIQRLNAFNSAAQGDEDSDDE 956
KVHAAIRADP KKT KP PK HKR+NLKKLTYEERKNKLI+R+ A N A D+D DDE
Sbjct: 241 KVHAAIRADPNPKKTVKPAPKQHKRYNLKKLTYEERKNKLIERVKALNGAGGDDDDEDDE 300
>TAIR9_protein||AT5G39740.1 | Symbols: OLI7, RPL5B | 60S ribosomal protein L5
(RPL5B) | chr5:15903365-15905185 FORWARD
Length = 302
Score = 447 bits (1148), Expect = 1e-125
Identities = 219/300 (73%), Positives = 246/300 (82%)
Frame = +3
Query: 57 MAFIKASKPRAYFKRFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI 236
M F+K+SK AYFKR+QVK++RRR+GKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI
Sbjct: 1 MVFVKSSKSNAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI 60
Query: 237 VAQIISATISGDLVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKKLEMDAEYE 416
VAQI+SA+I+GD+V ASAYAHELP+YGL VGLTNYAAAYCTGLLLARRVLK LEMD EYE
Sbjct: 61 VAQIVSASIAGDIVKASAYAHELPQYGLTVGLTNYAAAYCTGLLLARRVLKMLEMDDEYE 120
Query: 417 GNVEATGEDYSVEPGESRRPFRALLDVGLVKTTTGNRVFXXXXXXXXXXXXVPHSEKRFA 596
GNVEATGED+SVEP +SRRPFRALLDVGL++TTTGNRVF +PHS+KRFA
Sbjct: 121 GNVEATGEDFSVEPTDSRRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFA 180
Query: 597 GFSKDSKQLDAEVHRKYIYGGHVAAYMGTLIEDEPEKYQTHFSXXXXXXXXXXXXXXLYK 776
GF K++KQLDAE+HR YIYGGHV+ YM L EDEPEK QTHFS +YK
Sbjct: 181 GFHKENKQLDAEIHRNYIYGGHVSNYMKLLGEDEPEKLQTHFSAYIKKGVEAESIEEMYK 240
Query: 777 KVHAAIRADPLEKKTAKPEPKAHKRFNLKKLTYEERKNKLIQRLNAFNSAAQGDEDSDDE 956
KVHAAIRA+P KKT K PK HKR+NLKKLTYEERKNKLI+R+ A N A D+D DDE
Sbjct: 241 KVHAAIRAEPNHKKTEKSAPKEHKRYNLKKLTYEERKNKLIERVKALNGAGGDDDDEDDE 300
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 776,313,954
Number of Sequences: 33410
Number of Extensions: 776313954
Number of Successful Extensions: 41180746
Number of sequences better than 0.0: 0
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