BLASTX 7.6.2
Query= RU02210 /QuerySize=561
(560 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G11500.1 | Symbols: | small nuclear ribonucle... 150 6e-037
TAIR9_protein||AT2G23930.1 | Symbols: SNRNP-G | SNRNP-G (PROBABL... 147 6e-036
TAIR9_protein||AT2G23930.2 | Symbols: SNRNP-G | SNRNP-G (PROBABL... 120 8e-028
TAIR9_protein||AT3G14080.1 | Symbols: | small nuclear ribonucle... 53 1e-007
TAIR9_protein||AT3G14080.2 | Symbols: | small nuclear ribonucle... 53 1e-007
TAIR9_protein||AT1G19120.1 | Symbols: | small nuclear ribonucle... 51 5e-007
>TAIR9_protein||AT3G11500.1 | Symbols: | small nuclear ribonucleoprotein G,
putative / snRNP-G, putative / Sm protein G, putative |
chr3:3621626-3622474 REVERSE
Length = 80
Score = 150 bits (378), Expect = 6e-037
Identities = 72/78 (92%), Positives = 77/78 (98%)
Frame = -3
Query: 468 MSRSGQPPDLKKYMDKKLQIKLNANRMIIGTLRGFDQFMNLVVDNTVEVNGDEKTDIGMV 289
MSRSGQPPDLKKYMDKKLQIKLNANRM++GTLRGFDQFMNLVVDNTVEVNGD+KTDIGMV
Sbjct: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVEVNGDDKTDIGMV 60
Query: 288 VIRGNSVVTVEALEPVAK 235
VIRGNS+VTVEALEPV +
Sbjct: 61 VIRGNSIVTVEALEPVGR 78
>TAIR9_protein||AT2G23930.1 | Symbols: SNRNP-G | SNRNP-G (PROBABLE SMALL NUCLEAR
RIBONUCLEOPROTEIN G) | chr2:10182353-10183026 FORWARD
Length = 81
Score = 147 bits (369), Expect = 6e-036
Identities = 71/78 (91%), Positives = 76/78 (97%)
Frame = -3
Query: 468 MSRSGQPPDLKKYMDKKLQIKLNANRMIIGTLRGFDQFMNLVVDNTVEVNGDEKTDIGMV 289
MSRSGQPPDLKKYMDKKLQIKLNANRM+ GTLRGFDQFMNLVVDNTVEVNG++KTDIGMV
Sbjct: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMVTGTLRGFDQFMNLVVDNTVEVNGNDKTDIGMV 60
Query: 288 VIRGNSVVTVEALEPVAK 235
VIRGNS+VTVEALEPV +
Sbjct: 61 VIRGNSIVTVEALEPVGR 78
>TAIR9_protein||AT2G23930.2 | Symbols: SNRNP-G | SNRNP-G (PROBABLE SMALL NUCLEAR
RIBONUCLEOPROTEIN G) | chr2:10182496-10183026 FORWARD
Length = 68
Score = 120 bits (299), Expect = 8e-028
Identities = 58/65 (89%), Positives = 63/65 (96%)
Frame = -3
Query: 429 MDKKLQIKLNANRMIIGTLRGFDQFMNLVVDNTVEVNGDEKTDIGMVVIRGNSVVTVEAL 250
MDKKLQIKLNANRM+ GTLRGFDQFMNLVVDNTVEVNG++KTDIGMVVIRGNS+VTVEAL
Sbjct: 1 MDKKLQIKLNANRMVTGTLRGFDQFMNLVVDNTVEVNGNDKTDIGMVVIRGNSIVTVEAL 60
Query: 249 EPVAK 235
EPV +
Sbjct: 61 EPVGR 65
>TAIR9_protein||AT3G14080.1 | Symbols: | small nuclear ribonucleoprotein,
putative / snRNP, putative / Sm protein, putative |
chr3:4667717-4668989 FORWARD
Length = 129
Score = 53 bits (126), Expect = 1e-007
Identities = 29/69 (42%), Positives = 43/69 (62%), Gaps = 4/69 (5%)
Frame = -3
Query: 441 LKKYMDKKLQIKLNANRMIIGTLRGFDQFMNLVVDNTVE--VNGDEKTDI--GMVVIRGN 274
L Y+D+KL + L R ++GTLR FDQF N V++ E + G++ DI G+ VIRG
Sbjct: 15 LASYLDRKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGEQYCDIPLGLYVIRGE 74
Query: 273 SVVTVEALE 247
+VV + L+
Sbjct: 75 NVVLIGELD 83
>TAIR9_protein||AT3G14080.2 | Symbols: | small nuclear ribonucleoprotein,
putative / snRNP, putative / Sm protein, putative |
chr3:4667717-4668989 FORWARD
Length = 129
Score = 53 bits (126), Expect = 1e-007
Identities = 29/69 (42%), Positives = 43/69 (62%), Gaps = 4/69 (5%)
Frame = -3
Query: 441 LKKYMDKKLQIKLNANRMIIGTLRGFDQFMNLVVDNTVE--VNGDEKTDI--GMVVIRGN 274
L Y+D+KL + L R ++GTLR FDQF N V++ E + G++ DI G+ VIRG
Sbjct: 15 LASYLDRKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGEQYCDIPLGLYVIRGE 74
Query: 273 SVVTVEALE 247
+VV + L+
Sbjct: 75 NVVLIGELD 83
>TAIR9_protein||AT1G19120.1 | Symbols: | small nuclear ribonucleoprotein,
putative / snRNP, putative / Sm protein, putative |
chr1:6608288-6609162 FORWARD
Length = 129
Score = 51 bits (120), Expect = 5e-007
Identities = 29/69 (42%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Frame = -3
Query: 441 LKKYMDKKLQIKLNANRMIIGTLRGFDQFMNLVVDNTVE--VNGDEKTDI--GMVVIRGN 274
L Y+DKKL + L R ++G LR FDQF N V++ E + GD DI G+ +IRG
Sbjct: 15 LAAYLDKKLLVLLRDGRKLMGLLRSFDQFANAVLEEAYERVIVGDLYCDIPLGLYIIRGE 74
Query: 273 SVVTVEALE 247
+VV + L+
Sbjct: 75 NVVLIGELD 83
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 776,313,954
Number of Sequences: 33410
Number of Extensions: 776313954
Number of Successful Extensions: 41180746
Number of sequences better than 0.0: 0
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