BLASTX 7.6.2
Query= RU02223 /QuerySize=701
(700 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G55770.1 | Symbols: | LIM domain-containing p... 227 7e-060
TAIR9_protein||AT3G55770.2 | Symbols: | LIM domain-containing p... 227 7e-060
TAIR9_protein||AT3G55770.3 | Symbols: | LIM domain-containing p... 227 7e-060
TAIR9_protein||AT3G55770.4 | Symbols: | LIM domain-containing p... 227 7e-060
TAIR9_protein||AT3G55770.5 | Symbols: | LIM domain-containing p... 227 7e-060
TAIR9_protein||AT2G39900.1 | Symbols: | LIM domain-containing p... 215 3e-056
TAIR9_protein||AT2G45800.1 | Symbols: | LIM domain-containing p... 164 6e-041
TAIR9_protein||AT2G45800.2 | Symbols: | LIM domain-containing p... 164 6e-041
TAIR9_protein||AT3G61230.1 | Symbols: | LIM domain-containing p... 160 8e-040
TAIR9_protein||AT1G01780.1 | Symbols: | LIM domain-containing p... 159 2e-039
TAIR9_protein||AT1G10200.1 | Symbols: WLIM1 | WLIM1; transcripti... 127 1e-029
TAIR9_protein||AT3G55770.6 | Symbols: | LIM domain-containing p... 104 5e-023
>TAIR9_protein||AT3G55770.1 | Symbols: | LIM domain-containing protein |
chr3:20703799-20705115 FORWARD
Length = 200
Score = 227 bits (577), Expect = 7e-060
Identities = 104/118 (88%), Positives = 112/118 (94%)
Frame = +2
Query: 29 QLFKETGNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQEKCATCGKTAYPLEKVTV 208
QLFKE+G+FNKNFQSPAKSA+K TPELTR+PS+ AG FSGTQEKCATC KT YP+EKVTV
Sbjct: 64 QLFKESGSFNKNFQSPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIEKVTV 123
Query: 209 ESQAYHKSCFKCSHGGCPITPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASIKR 382
ESQ YHKSCFKCSHGGCPI+PSNYAALEGILYCKHHF+QLFKEKGSYNHLIKSASIKR
Sbjct: 124 ESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASIKR 181
Score = 94 bits (231), Expect = 9e-020
Identities = 39/76 (51%), Positives = 54/76 (71%)
Frame = +2
Query: 140 FSGTQEKCATCGKTAYPLEKVTVESQAYHKSCFKCSHGGCPITPSNYAALEGILYCKHHF 319
F+GTQ+KC C KT Y +E ++ + YHKSCFKC+H + S+Y+++EG+LYCK HF
Sbjct: 3 FTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKPHF 62
Query: 320 SQLFKEKGSYNHLIKS 367
QLFKE GS+N +S
Sbjct: 63 EQLFKESGSFNKNFQS 78
>TAIR9_protein||AT3G55770.2 | Symbols: | LIM domain-containing protein |
chr3:20703799-20705115 FORWARD
Length = 200
Score = 227 bits (577), Expect = 7e-060
Identities = 104/118 (88%), Positives = 112/118 (94%)
Frame = +2
Query: 29 QLFKETGNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQEKCATCGKTAYPLEKVTV 208
QLFKE+G+FNKNFQSPAKSA+K TPELTR+PS+ AG FSGTQEKCATC KT YP+EKVTV
Sbjct: 64 QLFKESGSFNKNFQSPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIEKVTV 123
Query: 209 ESQAYHKSCFKCSHGGCPITPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASIKR 382
ESQ YHKSCFKCSHGGCPI+PSNYAALEGILYCKHHF+QLFKEKGSYNHLIKSASIKR
Sbjct: 124 ESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASIKR 181
Score = 94 bits (231), Expect = 9e-020
Identities = 39/76 (51%), Positives = 54/76 (71%)
Frame = +2
Query: 140 FSGTQEKCATCGKTAYPLEKVTVESQAYHKSCFKCSHGGCPITPSNYAALEGILYCKHHF 319
F+GTQ+KC C KT Y +E ++ + YHKSCFKC+H + S+Y+++EG+LYCK HF
Sbjct: 3 FTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKPHF 62
Query: 320 SQLFKEKGSYNHLIKS 367
QLFKE GS+N +S
Sbjct: 63 EQLFKESGSFNKNFQS 78
>TAIR9_protein||AT3G55770.3 | Symbols: | LIM domain-containing protein |
chr3:20703799-20705115 FORWARD
Length = 200
Score = 227 bits (577), Expect = 7e-060
Identities = 104/118 (88%), Positives = 112/118 (94%)
Frame = +2
Query: 29 QLFKETGNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQEKCATCGKTAYPLEKVTV 208
QLFKE+G+FNKNFQSPAKSA+K TPELTR+PS+ AG FSGTQEKCATC KT YP+EKVTV
Sbjct: 64 QLFKESGSFNKNFQSPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIEKVTV 123
Query: 209 ESQAYHKSCFKCSHGGCPITPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASIKR 382
ESQ YHKSCFKCSHGGCPI+PSNYAALEGILYCKHHF+QLFKEKGSYNHLIKSASIKR
Sbjct: 124 ESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASIKR 181
Score = 94 bits (231), Expect = 9e-020
Identities = 39/76 (51%), Positives = 54/76 (71%)
Frame = +2
Query: 140 FSGTQEKCATCGKTAYPLEKVTVESQAYHKSCFKCSHGGCPITPSNYAALEGILYCKHHF 319
F+GTQ+KC C KT Y +E ++ + YHKSCFKC+H + S+Y+++EG+LYCK HF
Sbjct: 3 FTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKPHF 62
Query: 320 SQLFKEKGSYNHLIKS 367
QLFKE GS+N +S
Sbjct: 63 EQLFKESGSFNKNFQS 78
>TAIR9_protein||AT3G55770.4 | Symbols: | LIM domain-containing protein |
chr3:20703799-20705115 FORWARD
Length = 200
Score = 227 bits (577), Expect = 7e-060
Identities = 104/118 (88%), Positives = 112/118 (94%)
Frame = +2
Query: 29 QLFKETGNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQEKCATCGKTAYPLEKVTV 208
QLFKE+G+FNKNFQSPAKSA+K TPELTR+PS+ AG FSGTQEKCATC KT YP+EKVTV
Sbjct: 64 QLFKESGSFNKNFQSPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIEKVTV 123
Query: 209 ESQAYHKSCFKCSHGGCPITPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASIKR 382
ESQ YHKSCFKCSHGGCPI+PSNYAALEGILYCKHHF+QLFKEKGSYNHLIKSASIKR
Sbjct: 124 ESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASIKR 181
Score = 94 bits (231), Expect = 9e-020
Identities = 39/76 (51%), Positives = 54/76 (71%)
Frame = +2
Query: 140 FSGTQEKCATCGKTAYPLEKVTVESQAYHKSCFKCSHGGCPITPSNYAALEGILYCKHHF 319
F+GTQ+KC C KT Y +E ++ + YHKSCFKC+H + S+Y+++EG+LYCK HF
Sbjct: 3 FTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKPHF 62
Query: 320 SQLFKEKGSYNHLIKS 367
QLFKE GS+N +S
Sbjct: 63 EQLFKESGSFNKNFQS 78
>TAIR9_protein||AT3G55770.5 | Symbols: | LIM domain-containing protein |
chr3:20703799-20705115 FORWARD
Length = 200
Score = 227 bits (577), Expect = 7e-060
Identities = 104/118 (88%), Positives = 112/118 (94%)
Frame = +2
Query: 29 QLFKETGNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQEKCATCGKTAYPLEKVTV 208
QLFKE+G+FNKNFQSPAKSA+K TPELTR+PS+ AG FSGTQEKCATC KT YP+EKVTV
Sbjct: 64 QLFKESGSFNKNFQSPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIEKVTV 123
Query: 209 ESQAYHKSCFKCSHGGCPITPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASIKR 382
ESQ YHKSCFKCSHGGCPI+PSNYAALEGILYCKHHF+QLFKEKGSYNHLIKSASIKR
Sbjct: 124 ESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASIKR 181
Score = 94 bits (231), Expect = 9e-020
Identities = 39/76 (51%), Positives = 54/76 (71%)
Frame = +2
Query: 140 FSGTQEKCATCGKTAYPLEKVTVESQAYHKSCFKCSHGGCPITPSNYAALEGILYCKHHF 319
F+GTQ+KC C KT Y +E ++ + YHKSCFKC+H + S+Y+++EG+LYCK HF
Sbjct: 3 FTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKPHF 62
Query: 320 SQLFKEKGSYNHLIKS 367
QLFKE GS+N +S
Sbjct: 63 EQLFKESGSFNKNFQS 78
>TAIR9_protein||AT2G39900.1 | Symbols: | LIM domain-containing protein |
chr2:16659136-16660267 FORWARD
Length = 201
Score = 215 bits (546), Expect = 3e-056
Identities = 102/139 (73%), Positives = 114/139 (82%), Gaps = 4/139 (2%)
Frame = +2
Query: 29 QLFKETGNFNKNFQSPAKS-AEKLTPELTRSPSKAAGMFSGTQEKCATCGKTAYPLEKVT 205
QLFKE+G+F+KNFQSPAK +K TPEL R+PS+ AGMFSGTQ+KCATC KT YP+EKVT
Sbjct: 64 QLFKESGSFSKNFQSPAKPLTDKPTPELNRTPSRLAGMFSGTQDKCATCTKTVYPIEKVT 123
Query: 206 VESQAYHKSCFKCSHGGCPITPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASIKRX 385
VESQ YHKSCFKCSHGGCPI+PSNYAALEGILYCKHHF+QLFKEKGSYNHLIKSASIKR
Sbjct: 124 VESQCYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASIKR- 182
Query: 386 XXXXXXXXXXXXXXXSIPE 442
++PE
Sbjct: 183 --ATAAATAAAAAVAAVPE 199
Score = 94 bits (233), Expect = 5e-020
Identities = 38/76 (50%), Positives = 56/76 (73%)
Frame = +2
Query: 140 FSGTQEKCATCGKTAYPLEKVTVESQAYHKSCFKCSHGGCPITPSNYAALEGILYCKHHF 319
F+GTQ+KC C KT YP+E ++ + +YHK+CFKCSH + SNY+++EG++YC+ HF
Sbjct: 3 FTGTQQKCRACEKTVYPVELLSADGISYHKACFKCSHCKSRLQLSNYSSMEGVVYCRPHF 62
Query: 320 SQLFKEKGSYNHLIKS 367
QLFKE GS++ +S
Sbjct: 63 EQLFKESGSFSKNFQS 78
>TAIR9_protein||AT2G45800.1 | Symbols: | LIM domain-containing protein |
chr2:18858153-18859007 REVERSE
Length = 227
Score = 164 bits (414), Expect = 6e-041
Identities = 74/118 (62%), Positives = 95/118 (80%), Gaps = 2/118 (1%)
Frame = +2
Query: 29 QLFKETGNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQEKCATCGKTAYPLEKVTV 208
QLFKE+GN++KNFQ A EK LTR+PSK + FSGTQ+KCATC KT YPLEKVT+
Sbjct: 64 QLFKESGNYSKNFQ--AGKTEKPNDHLTRTPSKLSSFFSGTQDKCATCKKTVYPLEKVTM 121
Query: 209 ESQAYHKSCFKCSHGGCPITPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASIKR 382
E ++YHK+CF+C+H GCP+T S+YA+L G+LYCK HF+QLF EKGSYNH+ ++A+ R
Sbjct: 122 EGESYHKTCFRCTHSGCPLTHSSYASLNGVLYCKVHFNQLFLEKGSYNHVHQAAANHR 179
Score = 92 bits (226), Expect = 4e-019
Identities = 36/71 (50%), Positives = 52/71 (73%)
Frame = +2
Query: 140 FSGTQEKCATCGKTAYPLEKVTVESQAYHKSCFKCSHGGCPITPSNYAALEGILYCKHHF 319
F+GT +KC C KT Y ++ +T+E YHKSCF+C+H + SNY++++G+LYCK HF
Sbjct: 3 FTGTLDKCKACDKTVYVMDLLTLEGNTYHKSCFRCTHCKGTLVISNYSSMDGVLYCKPHF 62
Query: 320 SQLFKEKGSYN 352
QLFKE G+Y+
Sbjct: 63 EQLFKESGNYS 73
>TAIR9_protein||AT2G45800.2 | Symbols: | LIM domain-containing protein |
chr2:18858153-18858823 REVERSE
Length = 196
Score = 164 bits (414), Expect = 6e-041
Identities = 74/118 (62%), Positives = 95/118 (80%), Gaps = 2/118 (1%)
Frame = +2
Query: 29 QLFKETGNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQEKCATCGKTAYPLEKVTV 208
QLFKE+GN++KNFQ A EK LTR+PSK + FSGTQ+KCATC KT YPLEKVT+
Sbjct: 33 QLFKESGNYSKNFQ--AGKTEKPNDHLTRTPSKLSSFFSGTQDKCATCKKTVYPLEKVTM 90
Query: 209 ESQAYHKSCFKCSHGGCPITPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASIKR 382
E ++YHK+CF+C+H GCP+T S+YA+L G+LYCK HF+QLF EKGSYNH+ ++A+ R
Sbjct: 91 EGESYHKTCFRCTHSGCPLTHSSYASLNGVLYCKVHFNQLFLEKGSYNHVHQAAANHR 148
>TAIR9_protein||AT3G61230.1 | Symbols: | LIM domain-containing protein |
chr3:22664601-22665503 REVERSE
Length = 214
Score = 160 bits (404), Expect = 8e-040
Identities = 68/118 (57%), Positives = 98/118 (83%), Gaps = 2/118 (1%)
Frame = +2
Query: 29 QLFKETGNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQEKCATCGKTAYPLEKVTV 208
QLFKE+GNF+KNFQ+ K+ + + + T++P++ + FSGTQ+KCA C KT YPLEK+T+
Sbjct: 65 QLFKESGNFSKNFQTAGKTEK--SNDATKAPNRLSSFFSGTQDKCAACKKTVYPLEKMTM 122
Query: 209 ESQAYHKSCFKCSHGGCPITPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASIKR 382
E ++YHK+CF+C+H GCP+T S+YAAL+G+LYCK HFSQLF EKG+YNH++++A+ R
Sbjct: 123 EGESYHKTCFRCAHSGCPLTHSSYAALDGVLYCKVHFSQLFLEKGNYNHVLQAAANHR 180
Score = 91 bits (224), Expect = 6e-019
Identities = 36/77 (46%), Positives = 54/77 (70%)
Frame = +2
Query: 140 FSGTQEKCATCGKTAYPLEKVTVESQAYHKSCFKCSHGGCPITPSNYAALEGILYCKHHF 319
F+GT +KC C KT Y ++ +T+E YHKSCF+CSH + NY++++G+LYCK HF
Sbjct: 4 FTGTTDKCKACDKTVYVMDLMTLEGMPYHKSCFRCSHCNGTLVICNYSSMDGVLYCKTHF 63
Query: 320 SQLFKEKGSYNHLIKSA 370
QLFKE G+++ ++A
Sbjct: 64 EQLFKESGNFSKNFQTA 80
>TAIR9_protein||AT1G01780.1 | Symbols: | LIM domain-containing protein |
chr1:282919-284082 FORWARD
Length = 206
Score = 159 bits (400), Expect = 2e-039
Identities = 68/118 (57%), Positives = 97/118 (82%), Gaps = 4/118 (3%)
Frame = +2
Query: 29 QLFKETGNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQEKCATCGKTAYPLEKVTV 208
QLFKE+GNF+KNFQ P K+ + PELTR+PSK + +F GTQ+KCA C KT YPLEK+ +
Sbjct: 64 QLFKESGNFSKNFQ-PGKTEK---PELTRTPSKISSIFCGTQDKCAACEKTVYPLEKIQM 119
Query: 209 ESQAYHKSCFKCSHGGCPITPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASIKR 382
E + +HK+CF+C+HGGC +T S+YA+L+ +LYC+HHF+QLF EKG+Y H++++A+ +R
Sbjct: 120 EGECFHKTCFRCAHGGCTLTHSSYASLDSVLYCRHHFNQLFMEKGNYAHVLQAANHRR 177
Score = 89 bits (218), Expect = 3e-018
Identities = 34/71 (47%), Positives = 52/71 (73%)
Frame = +2
Query: 140 FSGTQEKCATCGKTAYPLEKVTVESQAYHKSCFKCSHGGCPITPSNYAALEGILYCKHHF 319
F+GT +KC C KT Y ++ +++E YHKSCF+C+H + SNY++++G+LYCK HF
Sbjct: 3 FTGTLDKCNVCDKTVYVVDMLSIEGMPYHKSCFRCTHCKGTLQMSNYSSMDGVLYCKTHF 62
Query: 320 SQLFKEKGSYN 352
QLFKE G+++
Sbjct: 63 EQLFKESGNFS 73
>TAIR9_protein||AT1G10200.1 | Symbols: WLIM1 | WLIM1; transcription factor/ zinc
ion binding | chr1:3346677-3347763 REVERSE
Length = 191
Score = 127 bits (317), Expect = 1e-029
Identities = 60/112 (53%), Positives = 73/112 (65%), Gaps = 2/112 (1%)
Frame = +2
Query: 29 QLFKETGNFNKNFQSPAKSAEKLTPELTRSP--SKAAGMFSGTQEKCATCGKTAYPLEKV 202
Q FK TG+ K+F+ K + P P +K + MF GT+EKC C KT YP+EKV
Sbjct: 64 QNFKRTGSLEKSFEGTPKIGKPDRPLEGERPAGTKVSNMFGGTREKCVGCDKTVYPIEKV 123
Query: 203 TVESQAYHKSCFKCSHGGCPITPSNYAALEGILYCKHHFSQLFKEKGSYNHL 358
+V YHKSCFKC+HGGC I+PSNY A EG LYCKHH QL KEKG+ + L
Sbjct: 124 SVNGTLYHKSCFKCTHGGCTISPSNYIAHEGKLYCKHHHIQLIKEKGNLSQL 175
>TAIR9_protein||AT3G55770.6 | Symbols: | LIM domain-containing protein |
chr3:20703799-20704614 FORWARD
Length = 128
Score = 104 bits (259), Expect = 5e-023
Identities = 48/60 (80%), Positives = 54/60 (90%)
Frame = +2
Query: 29 QLFKETGNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQEKCATCGKTAYPLEKVTV 208
QLFKE+G+FNKNFQSPAKSA+K TPELTR+PS+ AG FSGTQEKCATC KT YP+EKV V
Sbjct: 64 QLFKESGSFNKNFQSPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIEKVYV 123
Score = 94 bits (231), Expect = 9e-020
Identities = 39/76 (51%), Positives = 54/76 (71%)
Frame = +2
Query: 140 FSGTQEKCATCGKTAYPLEKVTVESQAYHKSCFKCSHGGCPITPSNYAALEGILYCKHHF 319
F+GTQ+KC C KT Y +E ++ + YHKSCFKC+H + S+Y+++EG+LYCK HF
Sbjct: 3 FTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKPHF 62
Query: 320 SQLFKEKGSYNHLIKS 367
QLFKE GS+N +S
Sbjct: 63 EQLFKESGSFNKNFQS 78
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 776,313,954
Number of Sequences: 33410
Number of Extensions: 776313954
Number of Successful Extensions: 41180746
Number of sequences better than 0.0: 0
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