BLASTX 7.6.2
Query= RU02255 /QuerySize=732
(731 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G17760.1 | Symbols: GAD5 | GAD5 (glutamate dec... 226 2e-059
TAIR9_protein||AT3G17760.2 | Symbols: GAD5 | GAD5 (glutamate dec... 226 2e-059
TAIR9_protein||AT5G17330.1 | Symbols: GAD, GAD1 | GAD; calmoduli... 208 4e-054
TAIR9_protein||AT2G02010.1 | Symbols: GAD4 | GAD4 (glutamate dec... 206 1e-053
TAIR9_protein||AT2G02000.1 | Symbols: GAD3 | GAD3 (glutamate dec... 206 1e-053
TAIR9_protein||AT1G65960.1 | Symbols: GAD2 | GAD2 (GLUTAMATE DEC... 204 7e-053
TAIR9_protein||AT1G65960.2 | Symbols: GAD2 | GAD2 (GLUTAMATE DEC... 204 7e-053
>TAIR9_protein||AT3G17760.1 | Symbols: GAD5 | GAD5 (glutamate decarboxylase 5);
calmodulin binding | chr3:6078893-6080838 REVERSE
Length = 495
Score = 226 bits (574), Expect = 2e-059
Identities = 113/164 (68%), Positives = 135/164 (82%), Gaps = 4/164 (2%)
Frame = +1
Query: 109 SSQIIAQYYQFIRLGFEGYKNVMENCMDNTRALKEGLEKTGRFEILSKDIGVPLVAFKLK 288
SSQIIAQYYQFIRLGFEGYKN+MENCMDN R L+EG+E TG+F I+SKDIGVPLVAF LK
Sbjct: 321 SSQIIAQYYQFIRLGFEGYKNIMENCMDNARRLREGIEMTGKFNIVSKDIGVPLVAFSLK 380
Query: 289 DSSKHTVFEIADSLRKFGWIVPAYTMPANAEHIAVLRVVVREDFSRSLAERLLSDIDKVL 468
DSSKHTVFEIA+SLRKFGWI+PAYTMPA+A+HIAVLRVV+REDFSR LA+RL++ I +VL
Sbjct: 381 DSSKHTVFEIAESLRKFGWIIPAYTMPADAQHIAVLRVVIREDFSRGLADRLITHIIQVL 440
Query: 469 NEIDTLPTRVSMKAAHVTATVDEGVNASEGMVKPGKKSVEEIQR 600
EI+ LP+R+ AH+ A + E VK K S+E+I +
Sbjct: 441 KEIEGLPSRI----AHLAAAAAVSGDDEEVKVKTAKMSLEDITK 480
>TAIR9_protein||AT3G17760.2 | Symbols: GAD5 | GAD5 (glutamate decarboxylase 5);
calmodulin binding | chr3:6078893-6080838 REVERSE
Length = 495
Score = 226 bits (574), Expect = 2e-059
Identities = 113/164 (68%), Positives = 135/164 (82%), Gaps = 4/164 (2%)
Frame = +1
Query: 109 SSQIIAQYYQFIRLGFEGYKNVMENCMDNTRALKEGLEKTGRFEILSKDIGVPLVAFKLK 288
SSQIIAQYYQFIRLGFEGYKN+MENCMDN R L+EG+E TG+F I+SKDIGVPLVAF LK
Sbjct: 321 SSQIIAQYYQFIRLGFEGYKNIMENCMDNARRLREGIEMTGKFNIVSKDIGVPLVAFSLK 380
Query: 289 DSSKHTVFEIADSLRKFGWIVPAYTMPANAEHIAVLRVVVREDFSRSLAERLLSDIDKVL 468
DSSKHTVFEIA+SLRKFGWI+PAYTMPA+A+HIAVLRVV+REDFSR LA+RL++ I +VL
Sbjct: 381 DSSKHTVFEIAESLRKFGWIIPAYTMPADAQHIAVLRVVIREDFSRGLADRLITHIIQVL 440
Query: 469 NEIDTLPTRVSMKAAHVTATVDEGVNASEGMVKPGKKSVEEIQR 600
EI+ LP+R+ AH+ A + E VK K S+E+I +
Sbjct: 441 KEIEGLPSRI----AHLAAAAAVSGDDEEVKVKTAKMSLEDITK 480
>TAIR9_protein||AT5G17330.1 | Symbols: GAD, GAD1 | GAD; calmodulin binding /
glutamate decarboxylase | chr5:5711141-5714839 FORWARD
Length = 503
Score = 208 bits (528), Expect = 4e-054
Identities = 105/171 (61%), Positives = 133/171 (77%), Gaps = 3/171 (1%)
Frame = +1
Query: 109 SSQIIAQYYQFIRLGFEGYKNVMENCMDNTRALKEGLEKTGRFEILSKDIGVPLVAFKLK 288
SSQ+IAQYYQ IRLG EGY+NVMENC +N L+EGLEKT RF I+SKD GVPLVAF LK
Sbjct: 322 SSQVIAQYYQLIRLGHEGYRNVMENCRENMIVLREGLEKTERFNIVSKDEGVPLVAFSLK 381
Query: 289 DSSKHTVFEIADSLRKFGWIVPAYTMPANAEHIAVLRVVVREDFSRSLAERLLSDIDKVL 468
DSS HT FEI+D LR++GWIVPAYTMP NA+HI VLRVV+REDFSR+LAERL+ DI+KV+
Sbjct: 382 DSSCHTEFEISDMLRRYGWIVPAYTMPPNAQHITVLRVVIREDFSRTLAERLVIDIEKVM 441
Query: 469 NEIDTLPTRVSMKAAHVTATVDEGVNASEGMVKPGKKSVEEIQREVATYWR 621
E+D LP+RV K ++ ++ + S+ ++ KKS + QR++ T W+
Sbjct: 442 RELDELPSRVIHK---ISLGQEKSESNSDNLMVTVKKSDIDKQRDIITGWK 489
>TAIR9_protein||AT2G02010.1 | Symbols: GAD4 | GAD4 (glutamate decarboxylase 4);
calmodulin binding | chr2:474375-476495 REVERSE
Length = 494
Score = 206 bits (524), Expect = 1e-053
Identities = 96/136 (70%), Positives = 120/136 (88%)
Frame = +1
Query: 109 SSQIIAQYYQFIRLGFEGYKNVMENCMDNTRALKEGLEKTGRFEILSKDIGVPLVAFKLK 288
SSQ+IAQYYQ IRLGFEGY+NVM+NC +N L++GLEKTGRF+I+SK+ GVPLVAF LK
Sbjct: 322 SSQVIAQYYQLIRLGFEGYRNVMDNCRENMMVLRQGLEKTGRFKIVSKENGVPLVAFSLK 381
Query: 289 DSSKHTVFEIADSLRKFGWIVPAYTMPANAEHIAVLRVVVREDFSRSLAERLLSDIDKVL 468
DSS+H FE+A +LR+FGWIVPAYTMPA+A+H+ VLRVV+REDFSR+LAERL++D +KVL
Sbjct: 382 DSSRHNEFEVAHTLRRFGWIVPAYTMPADAQHVTVLRVVIREDFSRTLAERLVADFEKVL 441
Query: 469 NEIDTLPTRVSMKAAH 516
+E+DTLP RV K A+
Sbjct: 442 HELDTLPARVHAKMAN 457
>TAIR9_protein||AT2G02000.1 | Symbols: GAD3 | GAD3 (glutamate decarboxylase 3);
calmodulin binding | chr2:469505-471997 REVERSE
Length = 501
Score = 206 bits (523), Expect = 1e-053
Identities = 96/135 (71%), Positives = 118/135 (87%)
Frame = +1
Query: 109 SSQIIAQYYQFIRLGFEGYKNVMENCMDNTRALKEGLEKTGRFEILSKDIGVPLVAFKLK 288
SSQ+IAQYYQ IRLGFEGY+NVM+NC +N L++GLEKTGRF I+SK+ GVPLVAF LK
Sbjct: 322 SSQVIAQYYQLIRLGFEGYRNVMDNCRENMMVLRQGLEKTGRFNIVSKENGVPLVAFSLK 381
Query: 289 DSSKHTVFEIADSLRKFGWIVPAYTMPANAEHIAVLRVVVREDFSRSLAERLLSDIDKVL 468
DSS+H FE+A+ LR+FGWIVPAYTMPA+A+H+ VLRVV+REDFSR+LAERL++D +KVL
Sbjct: 382 DSSRHNEFEVAEMLRRFGWIVPAYTMPADAQHVTVLRVVIREDFSRTLAERLVADFEKVL 441
Query: 469 NEIDTLPTRVSMKAA 513
+E+DTLP RV K A
Sbjct: 442 HELDTLPARVHAKMA 456
>TAIR9_protein||AT1G65960.1 | Symbols: GAD2 | GAD2 (GLUTAMATE DECARBOXYLASE 2);
calmodulin binding / glutamate decarboxylase | chr1:24555868-24557253
FORWARD
Length = 366
Score = 204 bits (517), Expect = 7e-053
Identities = 98/133 (73%), Positives = 117/133 (87%)
Frame = +1
Query: 109 SSQIIAQYYQFIRLGFEGYKNVMENCMDNTRALKEGLEKTGRFEILSKDIGVPLVAFKLK 288
SSQIIAQYYQ IRLGFEGYKNVMENC++N LKEG+EKT RF I+SKD GVP+VAF LK
Sbjct: 192 SSQIIAQYYQLIRLGFEGYKNVMENCIENMVVLKEGIEKTERFNIVSKDQGVPVVAFSLK 251
Query: 289 DSSKHTVFEIADSLRKFGWIVPAYTMPANAEHIAVLRVVVREDFSRSLAERLLSDIDKVL 468
D S H FEI++ LR+FGWIVPAYTMPA+A+HI VLRVV+REDFSR+LAERL++DI KVL
Sbjct: 252 DHSFHNEFEISEMLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVADISKVL 311
Query: 469 NEIDTLPTRVSMK 507
+E+DTLP+++S K
Sbjct: 312 HELDTLPSKISKK 324
>TAIR9_protein||AT1G65960.2 | Symbols: GAD2 | GAD2 (GLUTAMATE DECARBOXYLASE 2);
calmodulin binding / glutamate decarboxylase | chr1:24552094-24557253
FORWARD
Length = 495
Score = 204 bits (517), Expect = 7e-053
Identities = 98/133 (73%), Positives = 117/133 (87%)
Frame = +1
Query: 109 SSQIIAQYYQFIRLGFEGYKNVMENCMDNTRALKEGLEKTGRFEILSKDIGVPLVAFKLK 288
SSQIIAQYYQ IRLGFEGYKNVMENC++N LKEG+EKT RF I+SKD GVP+VAF LK
Sbjct: 321 SSQIIAQYYQLIRLGFEGYKNVMENCIENMVVLKEGIEKTERFNIVSKDQGVPVVAFSLK 380
Query: 289 DSSKHTVFEIADSLRKFGWIVPAYTMPANAEHIAVLRVVVREDFSRSLAERLLSDIDKVL 468
D S H FEI++ LR+FGWIVPAYTMPA+A+HI VLRVV+REDFSR+LAERL++DI KVL
Sbjct: 381 DHSFHNEFEISEMLRRFGWIVPAYTMPADAQHITVLRVVIREDFSRTLAERLVADISKVL 440
Query: 469 NEIDTLPTRVSMK 507
+E+DTLP+++S K
Sbjct: 441 HELDTLPSKISKK 453
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 776,313,954
Number of Sequences: 33410
Number of Extensions: 776313954
Number of Successful Extensions: 41180746
Number of sequences better than 0.0: 0
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