BLASTX 7.6.2
Query= RU02387 /QuerySize=572
(571 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G39540.1 | Symbols: | shikimate kinase family... 74 5e-014
TAIR9_protein||AT4G39540.2 | Symbols: | shikimate kinase family... 74 5e-014
TAIR9_protein||AT2G21940.1 | Symbols: | shikimate kinase, putat... 64 7e-011
TAIR9_protein||AT2G21940.2 | Symbols: | shikimate kinase, putat... 64 7e-011
TAIR9_protein||AT2G21940.3 | Symbols: | shikimate kinase, putat... 64 7e-011
TAIR9_protein||AT2G21940.5 | Symbols: | shikimate kinase, putat... 64 7e-011
TAIR9_protein||AT2G21940.4 | Symbols: | shikimate kinase, putat... 61 4e-010
>TAIR9_protein||AT4G39540.1 | Symbols: | shikimate kinase family protein |
chr4:18378561-18380253 FORWARD
Length = 301
Score = 74 bits (180), Expect = 5e-014
Identities = 48/109 (44%), Positives = 71/109 (65%), Gaps = 8/109 (7%)
Frame = -1
Query: 319 RR*RGDPEWLARF-SRRLKEEQSKRHVLVPAAHLPKSNRHRHVAVDYNHWNPASPVESGN 143
R G P R+ ++R+KE++ R V A L K HR +V + N ++ +E+G+
Sbjct: 18 RNFEGKPRGSLRYNTQRIKEDKRFR---VVALTLDKRRDHRLRSV--SDKNSSALLETGS 72
Query: 142 -FHAHFD-ESYVLKTKSQEIEPYLKGRCIYLVGMMGSGKTTVGKILAQA 2
H+ FD E +LK K++E++PYL GR +YLVGMMGSGKTTVGKI+A++
Sbjct: 73 LLHSPFDEEQQILKKKAEEVKPYLNGRSMYLVGMMGSGKTTVGKIMARS 121
>TAIR9_protein||AT4G39540.2 | Symbols: | shikimate kinase family protein |
chr4:18378561-18380253 FORWARD
Length = 301
Score = 74 bits (180), Expect = 5e-014
Identities = 48/109 (44%), Positives = 71/109 (65%), Gaps = 8/109 (7%)
Frame = -1
Query: 319 RR*RGDPEWLARF-SRRLKEEQSKRHVLVPAAHLPKSNRHRHVAVDYNHWNPASPVESGN 143
R G P R+ ++R+KE++ R V A L K HR +V + N ++ +E+G+
Sbjct: 18 RNFEGKPRGSLRYNTQRIKEDKRFR---VVALTLDKRRDHRLRSV--SDKNSSALLETGS 72
Query: 142 -FHAHFD-ESYVLKTKSQEIEPYLKGRCIYLVGMMGSGKTTVGKILAQA 2
H+ FD E +LK K++E++PYL GR +YLVGMMGSGKTTVGKI+A++
Sbjct: 73 LLHSPFDEEQQILKKKAEEVKPYLNGRSMYLVGMMGSGKTTVGKIMARS 121
>TAIR9_protein||AT2G21940.1 | Symbols: | shikimate kinase, putative |
chr2:9351106-9352881 FORWARD
Length = 304
Score = 64 bits (153), Expect = 7e-011
Identities = 32/63 (50%), Positives = 49/63 (77%), Gaps = 2/63 (3%)
Frame = -1
Query: 193 AVDYNHWNPASPVESGNFHAHFDESYVLKTKSQEIEPYLKGRCIYLVGMMGSGKTTVGKI 14
AV + N ++ +E+G+ + FDE +LK K++E++PYL GR +YLVGMMGSGKTTVGK+
Sbjct: 64 AVSCSDNNSSALLETGSVYP-FDED-ILKRKAEEVKPYLNGRSMYLVGMMGSGKTTVGKL 121
Query: 13 LAQ 5
+++
Sbjct: 122 MSK 124
>TAIR9_protein||AT2G21940.2 | Symbols: | shikimate kinase, putative |
chr2:9351106-9352881 FORWARD
Length = 304
Score = 64 bits (153), Expect = 7e-011
Identities = 32/63 (50%), Positives = 49/63 (77%), Gaps = 2/63 (3%)
Frame = -1
Query: 193 AVDYNHWNPASPVESGNFHAHFDESYVLKTKSQEIEPYLKGRCIYLVGMMGSGKTTVGKI 14
AV + N ++ +E+G+ + FDE +LK K++E++PYL GR +YLVGMMGSGKTTVGK+
Sbjct: 64 AVSCSDNNSSALLETGSVYP-FDED-ILKRKAEEVKPYLNGRSMYLVGMMGSGKTTVGKL 121
Query: 13 LAQ 5
+++
Sbjct: 122 MSK 124
>TAIR9_protein||AT2G21940.3 | Symbols: | shikimate kinase, putative |
chr2:9351106-9352622 FORWARD
Length = 277
Score = 64 bits (153), Expect = 7e-011
Identities = 32/63 (50%), Positives = 49/63 (77%), Gaps = 2/63 (3%)
Frame = -1
Query: 193 AVDYNHWNPASPVESGNFHAHFDESYVLKTKSQEIEPYLKGRCIYLVGMMGSGKTTVGKI 14
AV + N ++ +E+G+ + FDE +LK K++E++PYL GR +YLVGMMGSGKTTVGK+
Sbjct: 64 AVSCSDNNSSALLETGSVYP-FDED-ILKRKAEEVKPYLNGRSMYLVGMMGSGKTTVGKL 121
Query: 13 LAQ 5
+++
Sbjct: 122 MSK 124
>TAIR9_protein||AT2G21940.5 | Symbols: | shikimate kinase, putative |
chr2:9351106-9352881 FORWARD
Length = 304
Score = 64 bits (153), Expect = 7e-011
Identities = 32/63 (50%), Positives = 49/63 (77%), Gaps = 2/63 (3%)
Frame = -1
Query: 193 AVDYNHWNPASPVESGNFHAHFDESYVLKTKSQEIEPYLKGRCIYLVGMMGSGKTTVGKI 14
AV + N ++ +E+G+ + FDE +LK K++E++PYL GR +YLVGMMGSGKTTVGK+
Sbjct: 64 AVSCSDNNSSALLETGSVYP-FDED-ILKRKAEEVKPYLNGRSMYLVGMMGSGKTTVGKL 121
Query: 13 LAQ 5
+++
Sbjct: 122 MSK 124
>TAIR9_protein||AT2G21940.4 | Symbols: | shikimate kinase, putative |
chr2:9351106-9352881 FORWARD
Length = 305
Score = 61 bits (147), Expect = 4e-010
Identities = 29/51 (56%), Positives = 43/51 (84%), Gaps = 2/51 (3%)
Frame = -1
Query: 157 VESGNFHAHFDESYVLKTKSQEIEPYLKGRCIYLVGMMGSGKTTVGKILAQ 5
+E+G+ + FDE +LK K++E++PYL GR +YLVGMMGSGKTTVGK++++
Sbjct: 77 LETGSVYP-FDED-ILKRKAEEVKPYLNGRSMYLVGMMGSGKTTVGKLMSK 125
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 776,313,954
Number of Sequences: 33410
Number of Extensions: 776313954
Number of Successful Extensions: 41180746
Number of sequences better than 0.0: 0
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