BLASTX 7.6.2
Query= RU02661 /QuerySize=1285
(1284 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G30330.1 | Symbols: ARF6 | ARF6 (AUXIN RESPONS... 704 5e-203
TAIR9_protein||AT1G30330.2 | Symbols: ARF6 | ARF6 (AUXIN RESPONS... 704 5e-203
TAIR9_protein||AT5G37020.1 | Symbols: ARF8, ATARF8 | ARF8 (AUXIN... 609 2e-174
TAIR9_protein||AT5G37020.2 | Symbols: ARF8 | ARF8 (AUXIN RESPONS... 609 2e-174
TAIR9_protein||AT1G19220.1 | Symbols: ARF19, IAA22, ARF11 | ARF1... 450 1e-126
TAIR9_protein||AT5G20730.2 | Symbols: NPH4, MSG1, IAA21, ARF7, T... 435 3e-122
TAIR9_protein||AT5G20730.1 | Symbols: NPH4, MSG1, IAA21, ARF7, T... 431 8e-121
TAIR9_protein||AT5G20730.3 | Symbols: NPH4, MSG1, IAA21, ARF7, T... 431 8e-121
TAIR9_protein||AT1G19850.1 | Symbols: MP, ARF5, IAA24 | MP (MONO... 399 2e-111
TAIR9_protein||AT5G62000.1 | Symbols: ARF2, ARF1-BP, HSS | ARF2 ... 329 4e-090
TAIR9_protein||AT5G62000.2 | Symbols: ARF2, ARF1-BP, HSS | ARF2 ... 329 4e-090
TAIR9_protein||AT5G62000.3 | Symbols: ARF2, ARF1-BP, HSS | ARF2 ... 329 4e-090
TAIR9_protein||AT1G59750.1 | Symbols: ARF1 | ARF1 (AUXIN RESPONS... 318 7e-087
TAIR9_protein||AT1G59750.2 | Symbols: ARF1 | ARF1 (AUXIN RESPONS... 318 7e-087
TAIR9_protein||AT1G59750.3 | Symbols: ARF1 | ARF1 (AUXIN RESPONS... 318 7e-087
TAIR9_protein||AT5G60450.1 | Symbols: ARF4 | ARF4 (AUXIN RESPONS... 316 3e-086
TAIR9_protein||AT3G61830.1 | Symbols: ARF18 | ARF18 (AUXIN RESPO... 289 4e-078
TAIR9_protein||AT2G46530.1 | Symbols: ARF11 | ARF11 (AUXIN RESPO... 288 8e-078
TAIR9_protein||AT2G46530.3 | Symbols: ARF11 | ARF11 (AUXIN RESPO... 288 8e-078
TAIR9_protein||AT4G23980.1 | Symbols: ARF9 | ARF9 (AUXIN RESPONS... 285 5e-077
TAIR9_protein||AT4G23980.2 | Symbols: ARF9 | ARF9 (AUXIN RESPONS... 285 5e-077
TAIR9_protein||AT2G33860.1 | Symbols: ETT, ARF3 | ETT (ETTIN); D... 262 5e-070
TAIR9_protein||AT2G46530.2 | Symbols: ARF11 | ARF11 (AUXIN RESPO... 247 2e-065
TAIR9_protein||AT1G34410.1 | Symbols: ARF21 | ARF21 (AUXIN RESPO... 235 6e-062
TAIR9_protein||AT1G34390.1 | Symbols: ARF22 | ARF22 (AUXIN RESPO... 228 6e-060
TAIR9_protein||AT1G34310.1 | Symbols: ARF12 | ARF12 (AUXIN RESPO... 228 6e-060
TAIR9_protein||AT1G35540.1 | Symbols: ARF14 | ARF14 (AUXIN RESPO... 225 8e-059
TAIR9_protein||AT1G35520.1 | Symbols: ARF15 | ARF15 (AUXIN RESPO... 223 2e-058
TAIR9_protein||AT1G34170.1 | Symbols: ARF13 | transcription fact... 215 8e-056
TAIR9_protein||AT1G35240.1 | Symbols: ARF20 | ARF20 (AUXIN RESPO... 205 9e-053
>TAIR9_protein||AT1G30330.1 | Symbols: ARF6 | ARF6 (AUXIN RESPONSE FACTOR 6);
transcription factor | chr1:10686125-10690036 REVERSE
Length = 934
Score = 704 bits (1815), Expect = 5e-203
Identities = 343/414 (82%), Positives = 368/414 (88%), Gaps = 10/414 (2%)
Frame = +3
Query: 3 TNKEVDAHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLNPQEQKDGYLPAGL 182
TNKEVDAHIPNYPSL PQLICQLHNVTMHADVETDEVYAQMTLQPLN QEQKD YLPA L
Sbjct: 57 TNKEVDAHIPNYPSLHPQLICQLHNVTMHADVETDEVYAQMTLQPLNAQEQKDPYLPAEL 116
Query: 183 GSPNKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNE 362
G P++QPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLD+SQQPPAQEL+ARDLHDNE
Sbjct: 117 GVPSRQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELMARDLHDNE 176
Query: 363 WKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMP 542
WKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWN+KNQLLLGIRRANRPQTVMP
Sbjct: 177 WKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDKNQLLLGIRRANRPQTVMP 236
Query: 543 SSVLSSDSMXXXXXXXXXXXXSTNSRFTIFYNPRASPSEFVIPLAKYIKAVYHTCVSVGM 722
SSVLSSDSM +TNSRFTIFYNPRASPSEFVIPLAKY+KAVYHT VSVGM
Sbjct: 237 SSVLSSDSMHLGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGM 296
Query: 723 RFRMLFETEESSVRRYMGTITGISDVDAARWPNSHWRSVKVGWDESTAGERQPRVSLWEI 902
RFRMLFETEESSVRRYMGTITGI D+D RW NSHWRSVKVGWDESTAGERQPRVSLWEI
Sbjct: 297 RFRMLFETEESSVRRYMGTITGICDLDPTRWANSHWRSVKVGWDESTAGERQPRVSLWEI 356
Query: 903 EPLTTFPMYPSPFPLRLKRPWPPGLPSFTGMREDD--LSMNTPLMWLRGDTGDRGIQSLS 1076
EPLTTFPMYPSPFPLRLKRPWPPGLPSF G++EDD +SM++PLMW DRG+QSL+
Sbjct: 357 EPLTTFPMYPSPFPLRLKRPWPPGLPSFHGLKEDDMGMSMSSPLMW------DRGLQSLN 410
Query: 1077 YHGIGVTPWMQPRLDVS-MIGLQTDMYQXXXXXXLQEMRAVDPSKSLHTSLLQF 1235
+ G+GV PWMQPRLD S ++G+Q D+YQ LQ+MR +DP+K+ SLLQF
Sbjct: 411 FQGMGVNPWMQPRLDTSGLLGMQNDVYQAMAAAALQDMRGIDPAKAA-ASLLQF 463
>TAIR9_protein||AT1G30330.2 | Symbols: ARF6 | ARF6 (AUXIN RESPONSE FACTOR 6);
transcription factor | chr1:10686125-10690036 REVERSE
Length = 936
Score = 704 bits (1815), Expect = 5e-203
Identities = 343/414 (82%), Positives = 368/414 (88%), Gaps = 10/414 (2%)
Frame = +3
Query: 3 TNKEVDAHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLNPQEQKDGYLPAGL 182
TNKEVDAHIPNYPSL PQLICQLHNVTMHADVETDEVYAQMTLQPLN QEQKD YLPA L
Sbjct: 59 TNKEVDAHIPNYPSLHPQLICQLHNVTMHADVETDEVYAQMTLQPLNAQEQKDPYLPAEL 118
Query: 183 GSPNKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNE 362
G P++QPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLD+SQQPPAQEL+ARDLHDNE
Sbjct: 119 GVPSRQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELMARDLHDNE 178
Query: 363 WKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMP 542
WKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWN+KNQLLLGIRRANRPQTVMP
Sbjct: 179 WKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDKNQLLLGIRRANRPQTVMP 238
Query: 543 SSVLSSDSMXXXXXXXXXXXXSTNSRFTIFYNPRASPSEFVIPLAKYIKAVYHTCVSVGM 722
SSVLSSDSM +TNSRFTIFYNPRASPSEFVIPLAKY+KAVYHT VSVGM
Sbjct: 239 SSVLSSDSMHLGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGM 298
Query: 723 RFRMLFETEESSVRRYMGTITGISDVDAARWPNSHWRSVKVGWDESTAGERQPRVSLWEI 902
RFRMLFETEESSVRRYMGTITGI D+D RW NSHWRSVKVGWDESTAGERQPRVSLWEI
Sbjct: 299 RFRMLFETEESSVRRYMGTITGICDLDPTRWANSHWRSVKVGWDESTAGERQPRVSLWEI 358
Query: 903 EPLTTFPMYPSPFPLRLKRPWPPGLPSFTGMREDD--LSMNTPLMWLRGDTGDRGIQSLS 1076
EPLTTFPMYPSPFPLRLKRPWPPGLPSF G++EDD +SM++PLMW DRG+QSL+
Sbjct: 359 EPLTTFPMYPSPFPLRLKRPWPPGLPSFHGLKEDDMGMSMSSPLMW------DRGLQSLN 412
Query: 1077 YHGIGVTPWMQPRLDVS-MIGLQTDMYQXXXXXXLQEMRAVDPSKSLHTSLLQF 1235
+ G+GV PWMQPRLD S ++G+Q D+YQ LQ+MR +DP+K+ SLLQF
Sbjct: 413 FQGMGVNPWMQPRLDTSGLLGMQNDVYQAMAAAALQDMRGIDPAKAA-ASLLQF 465
>TAIR9_protein||AT5G37020.1 | Symbols: ARF8, ATARF8 | ARF8 (AUXIN RESPONSE
FACTOR 8); transcription factor | chr5:14630151-14634106 FORWARD
Length = 812
Score = 609 bits (1569), Expect = 2e-174
Identities = 301/410 (73%), Positives = 334/410 (81%), Gaps = 5/410 (1%)
Frame = +3
Query: 3 TNKEVDAHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLNPQEQKDGYLPAGL 182
TNKEVD HIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPL P+EQK+ ++P L
Sbjct: 56 TNKEVDGHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPEEQKETFVPIEL 115
Query: 183 GSPNKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNE 362
G P+KQP+NYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLD++ QPPAQELIARDLHD E
Sbjct: 116 GIPSKQPSNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYTLQPPAQELIARDLHDVE 175
Query: 363 WKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMP 542
WKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSV+FI NEKNQL LGIR A RPQT++P
Sbjct: 176 WKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVIFIRNEKNQLFLGIRHATRPQTIVP 235
Query: 543 SSVLSSDSMXXXXXXXXXXXXSTNSRFTIFYNPRASPSEFVIPLAKYIKAVYHTCVSVGM 722
SSVLSSDSM +TNS FT+F++PRAS SEFVI L+KYIKAV+HT +SVGM
Sbjct: 236 SSVLSSDSMHIGLLAAAAHASATNSCFTVFFHPRASQSEFVIQLSKYIKAVFHTRISVGM 295
Query: 723 RFRMLFETEESSVRRYMGTITGISDVDAARWPNSHWRSVKVGWDESTAGERQPRVSLWEI 902
RFRMLFETEESSVRRYMGTITGISD+D+ RWPNSHWRSVKVGWDESTAGERQPRVSLWEI
Sbjct: 296 RFRMLFETEESSVRRYMGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEI 355
Query: 903 EPLTTFPMYPSPFPLRLKRPWPPGLPSFTGMREDDLSMNTPLMWLRGDTGD-RGIQSLSY 1079
EPLTTFPMYPS FPLRLKRPW G S R D + + L WLRG G+ +G+ L+Y
Sbjct: 356 EPLTTFPMYPSLFPLRLKRPWHAGTSSLPDGRGD---LGSGLTWLRGGGGEQQGLLPLNY 412
Query: 1080 HGIGVTPWMQPRLDVSMIGLQTD-MYQXXXXXXLQEMRAVDPSKSLHTSL 1226
+G+ PWMQ RLD+S +G + YQ LQ + DP + L
Sbjct: 413 PSVGLFPWMQQRLDLSQMGTDNNQQYQAMLAAGLQNIGGGDPLRQQFVQL 462
>TAIR9_protein||AT5G37020.2 | Symbols: ARF8 | ARF8 (AUXIN RESPONSE FACTOR 8);
transcription factor | chr5:14630151-14633916 FORWARD
Length = 774
Score = 609 bits (1569), Expect = 2e-174
Identities = 301/410 (73%), Positives = 334/410 (81%), Gaps = 5/410 (1%)
Frame = +3
Query: 3 TNKEVDAHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLNPQEQKDGYLPAGL 182
TNKEVD HIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPL P+EQK+ ++P L
Sbjct: 56 TNKEVDGHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPEEQKETFVPIEL 115
Query: 183 GSPNKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNE 362
G P+KQP+NYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLD++ QPPAQELIARDLHD E
Sbjct: 116 GIPSKQPSNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYTLQPPAQELIARDLHDVE 175
Query: 363 WKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMP 542
WKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSV+FI NEKNQL LGIR A RPQT++P
Sbjct: 176 WKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVIFIRNEKNQLFLGIRHATRPQTIVP 235
Query: 543 SSVLSSDSMXXXXXXXXXXXXSTNSRFTIFYNPRASPSEFVIPLAKYIKAVYHTCVSVGM 722
SSVLSSDSM +TNS FT+F++PRAS SEFVI L+KYIKAV+HT +SVGM
Sbjct: 236 SSVLSSDSMHIGLLAAAAHASATNSCFTVFFHPRASQSEFVIQLSKYIKAVFHTRISVGM 295
Query: 723 RFRMLFETEESSVRRYMGTITGISDVDAARWPNSHWRSVKVGWDESTAGERQPRVSLWEI 902
RFRMLFETEESSVRRYMGTITGISD+D+ RWPNSHWRSVKVGWDESTAGERQPRVSLWEI
Sbjct: 296 RFRMLFETEESSVRRYMGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEI 355
Query: 903 EPLTTFPMYPSPFPLRLKRPWPPGLPSFTGMREDDLSMNTPLMWLRGDTGD-RGIQSLSY 1079
EPLTTFPMYPS FPLRLKRPW G S R D + + L WLRG G+ +G+ L+Y
Sbjct: 356 EPLTTFPMYPSLFPLRLKRPWHAGTSSLPDGRGD---LGSGLTWLRGGGGEQQGLLPLNY 412
Query: 1080 HGIGVTPWMQPRLDVSMIGLQTD-MYQXXXXXXLQEMRAVDPSKSLHTSL 1226
+G+ PWMQ RLD+S +G + YQ LQ + DP + L
Sbjct: 413 PSVGLFPWMQQRLDLSQMGTDNNQQYQAMLAAGLQNIGGGDPLRQQFVQL 462
>TAIR9_protein||AT1G19220.1 | Symbols: ARF19, IAA22, ARF11 | ARF19 (AUXIN
RESPONSE FACTOR 19); DNA binding / transcription factor |
chr1:6628395-6632779 REVERSE
Length = 1087
Score = 450 bits (1156), Expect = 1e-126
Identities = 233/405 (57%), Positives = 287/405 (70%), Gaps = 17/405 (4%)
Frame = +3
Query: 27 IPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLNPQEQKDGYLPAGLG-SPNKQP 203
IPNYP+LP +LIC LH+VT+HAD ETDEVYAQMTLQP+N + ++ L + +G N+QP
Sbjct: 64 IPNYPNLPSKLICLLHSVTLHADTETDEVYAQMTLQPVNKYD-REALLASDMGLKLNRQP 122
Query: 204 TNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIF 383
T +FCKTLTASDTSTHGGFSVPRRAAEK+FPPLDFS QPPAQE++A+DLHD W FRHI+
Sbjct: 123 TEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDTTWTFRHIY 182
Query: 384 RGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSD 563
RGQPKRHLLTTGWSVFVS KRL AGDSVLF+ +EK+QL+LGIRRANR + SSV+SSD
Sbjct: 183 RGQPKRHLLTTGWSVFVSTKRLFAGDSVLFVRDEKSQLMLGIRRANRQTPTLSSSVISSD 242
Query: 564 SMXXXXXXXXXXXXSTNSRFTIFYNPRASPSEFVIPLAKYIKAVYHTCVSVGMRFRMLFE 743
SM + +S FTIF+NPRASPSEFV+PLAKY KA+Y VS+GMRFRM+FE
Sbjct: 243 SMHIGILAAAAHANANSSPFTIFFNPRASPSEFVVPLAKYNKALY-AQVSLGMRFRMMFE 301
Query: 744 TEESSVRRYMGTITGISDVDAARWPNSHWRSVKVGWDESTAGERQPRVSLWEIEP-LTTF 920
TE+ VRRYMGT+TGISD+D RW S WR+++VGWDESTAG+R RVS+WEIEP +T F
Sbjct: 302 TEDCGVRRYMGTVTGISDLDPVRWKGSQWRNLQVGWDESTAGDRPSRVSIWEIEPVITPF 361
Query: 921 PMYPSPFPLRLKRPWPPGLPSFTGMREDDLSMNT----PLMWLRGDTGDRGIQSLSYHGI 1088
+ P PF R K P PG+P +D+L M + W+ D G + QS + G+
Sbjct: 362 YICPPPF-FRPKYPRQPGMP------DDELDMENAFKRAMPWMGEDFGMKDAQSSMFPGL 414
Query: 1089 GVTPWMQPRLDVSMIGLQTDMYQXXXXX--XLQEMRAVDPSKSLH 1217
+ WM + + + G T + DPSK L+
Sbjct: 415 SLVQWMSMQQNNPLSGSATPQLPSALSSFNLPNNFASNDPSKLLN 459
>TAIR9_protein||AT5G20730.2 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP | NPH4
(NON-PHOTOTROPHIC HYPOCOTYL); DNA binding / transcription activator/
transcription factor/ transcription regulator | chr5:7016704-7021504
REVERSE
Length = 1165
Score = 435 bits (1118), Expect = 3e-122
Identities = 222/362 (61%), Positives = 265/362 (73%), Gaps = 7/362 (1%)
Frame = +3
Query: 27 IPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLNPQEQKDGYLPAGLG-SPNKQP 203
IP+YP+LP +LIC LHNVT++AD ETDEVYAQMTLQP+N + +D L + +G N+QP
Sbjct: 65 IPSYPNLPSKLICMLHNVTLNADPETDEVYAQMTLQPVNKYD-RDALLASDMGLKLNRQP 123
Query: 204 TNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIF 383
+FCKTLTASDTSTHGGFSVPRRAAEK+FP LDFS QPP QEL+A+D+HDN W FRHI+
Sbjct: 124 NEFFCKTLTASDTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIY 183
Query: 384 RGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSD 563
RGQPKRHLLTTGWSVFVS KRL AGDSVLFI + K QLLLGIRRANR Q + SSV+SSD
Sbjct: 184 RGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDGKAQLLLGIRRANRQQPALSSSVISSD 243
Query: 564 SMXXXXXXXXXXXXSTNSRFTIFYNPRASPSEFVIPLAKYIKAVYHTCVSVGMRFRMLFE 743
SM + NS FTIFYNPRA+P+EFV+PLAKY KA+Y VS+GMRFRM+FE
Sbjct: 244 SMHIGVLAAAAHANANNSPFTIFYNPRAAPAEFVVPLAKYTKAMY-AQVSLGMRFRMIFE 302
Query: 744 TEESSVRRYMGTITGISDVDAARWPNSHWRSVKVGWDESTAGERQPRVSLWEIEP-LTTF 920
TEE VRRYMGT+TGISD+D RW NS WR++++GWDES AG+R RVS+W+IEP LT F
Sbjct: 303 TEECGVRRYMGTVTGISDLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIEPVLTPF 362
Query: 921 PMYPSPFPLRLKRPWPPGLPSFTGMREDDLSMNTPLMWLRGDTGDRGIQSLSYHGIGVTP 1100
+ P PF R + PG+P E L P WL + S + G+ +
Sbjct: 363 YICPPPF-FRPRFSGQPGMPDDETDMESALKRAMP--WLDNSLEMKDPSSTIFPGLSLVQ 419
Query: 1101 WM 1106
WM
Sbjct: 420 WM 421
>TAIR9_protein||AT5G20730.1 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP | NPH4
(NON-PHOTOTROPHIC HYPOCOTYL); DNA binding / transcription activator/
transcription factor/ transcription regulator | chr5:7016704-7021504
REVERSE
Length = 1166
Score = 431 bits (1106), Expect = 8e-121
Identities = 222/363 (61%), Positives = 265/363 (73%), Gaps = 8/363 (2%)
Frame = +3
Query: 27 IPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLNPQEQKDGYLPAGLG-SPNKQP 203
IP+YP+LP +LIC LHNVT++AD ETDEVYAQMTLQP+N + +D L + +G N+QP
Sbjct: 65 IPSYPNLPSKLICMLHNVTLNADPETDEVYAQMTLQPVNKYD-RDALLASDMGLKLNRQP 123
Query: 204 TNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIF 383
+FCKTLTASDTSTHGGFSVPRRAAEK+FP LDFS QPP QEL+A+D+HDN W FRHI+
Sbjct: 124 NEFFCKTLTASDTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIY 183
Query: 384 RGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSD 563
RGQPKRHLLTTGWSVFVS KRL AGDSVLFI + K QLLLGIRRANR Q + SSV+SSD
Sbjct: 184 RGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDGKAQLLLGIRRANRQQPALSSSVISSD 243
Query: 564 SMXXXXXXXXXXXXSTNSRFTIFYNPR-ASPSEFVIPLAKYIKAVYHTCVSVGMRFRMLF 740
SM + NS FTIFYNPR A+P+EFV+PLAKY KA+Y VS+GMRFRM+F
Sbjct: 244 SMHIGVLAAAAHANANNSPFTIFYNPRWAAPAEFVVPLAKYTKAMY-AQVSLGMRFRMIF 302
Query: 741 ETEESSVRRYMGTITGISDVDAARWPNSHWRSVKVGWDESTAGERQPRVSLWEIEP-LTT 917
ETEE VRRYMGT+TGISD+D RW NS WR++++GWDES AG+R RVS+W+IEP LT
Sbjct: 303 ETEECGVRRYMGTVTGISDLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIEPVLTP 362
Query: 918 FPMYPSPFPLRLKRPWPPGLPSFTGMREDDLSMNTPLMWLRGDTGDRGIQSLSYHGIGVT 1097
F + P PF R + PG+P E L P WL + S + G+ +
Sbjct: 363 FYICPPPF-FRPRFSGQPGMPDDETDMESALKRAMP--WLDNSLEMKDPSSTIFPGLSLV 419
Query: 1098 PWM 1106
WM
Sbjct: 420 QWM 422
>TAIR9_protein||AT5G20730.3 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP,
IAA23, IAA25 | NPH4 (NON-PHOTOTROPHIC HYPOCOTYL); DNA binding /
transcription activator/ transcription factor/ transcription regulator
| chr5:7016704-7021504 REVERSE
Length = 1151
Score = 431 bits (1106), Expect = 8e-121
Identities = 222/363 (61%), Positives = 265/363 (73%), Gaps = 8/363 (2%)
Frame = +3
Query: 27 IPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLNPQEQKDGYLPAGLG-SPNKQP 203
IP+YP+LP +LIC LHNVT++AD ETDEVYAQMTLQP+N + +D L + +G N+QP
Sbjct: 65 IPSYPNLPSKLICMLHNVTLNADPETDEVYAQMTLQPVNKYD-RDALLASDMGLKLNRQP 123
Query: 204 TNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIF 383
+FCKTLTASDTSTHGGFSVPRRAAEK+FP LDFS QPP QEL+A+D+HDN W FRHI+
Sbjct: 124 NEFFCKTLTASDTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIY 183
Query: 384 RGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSD 563
RGQPKRHLLTTGWSVFVS KRL AGDSVLFI + K QLLLGIRRANR Q + SSV+SSD
Sbjct: 184 RGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDGKAQLLLGIRRANRQQPALSSSVISSD 243
Query: 564 SMXXXXXXXXXXXXSTNSRFTIFYNPR-ASPSEFVIPLAKYIKAVYHTCVSVGMRFRMLF 740
SM + NS FTIFYNPR A+P+EFV+PLAKY KA+Y VS+GMRFRM+F
Sbjct: 244 SMHIGVLAAAAHANANNSPFTIFYNPRWAAPAEFVVPLAKYTKAMY-AQVSLGMRFRMIF 302
Query: 741 ETEESSVRRYMGTITGISDVDAARWPNSHWRSVKVGWDESTAGERQPRVSLWEIEP-LTT 917
ETEE VRRYMGT+TGISD+D RW NS WR++++GWDES AG+R RVS+W+IEP LT
Sbjct: 303 ETEECGVRRYMGTVTGISDLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIEPVLTP 362
Query: 918 FPMYPSPFPLRLKRPWPPGLPSFTGMREDDLSMNTPLMWLRGDTGDRGIQSLSYHGIGVT 1097
F + P PF R + PG+P E L P WL + S + G+ +
Sbjct: 363 FYICPPPF-FRPRFSGQPGMPDDETDMESALKRAMP--WLDNSLEMKDPSSTIFPGLSLV 419
Query: 1098 PWM 1106
WM
Sbjct: 420 QWM 422
>TAIR9_protein||AT1G19850.1 | Symbols: MP, ARF5, IAA24 | MP (MONOPTEROS);
transcription factor | chr1:6887353-6891182 FORWARD
Length = 903
Score = 399 bits (1025), Expect = 2e-111
Identities = 197/343 (57%), Positives = 247/343 (72%), Gaps = 3/343 (0%)
Frame = +3
Query: 3 TNKEVDAHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLNPQEQKDGYLPAGL 182
T + +PNYP+LP QL+CQ+HNVT+HAD ++DE+YAQM+LQP++ + G+
Sbjct: 88 TRRSATTQVPNYPNLPSQLMCQVHNVTLHADKDSDEIYAQMSLQPVHSERDVFPVPDFGM 147
Query: 183 GSPNKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNE 362
+K PT +FCKTLTASDTSTHGGFSVPRRAAEK+FPPLD+S QPP QEL+ RDLH+N
Sbjct: 148 LRGSKHPTEFFCKTLTASDTSTHGGFSVPRRAAEKLFPPLDYSAQPPTQELVVRDLHENT 207
Query: 363 WKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMP 542
W FRHI+RGQPKRHLLTTGWS+FV +KRL AGDSVLFI +EK+QL++G+RRANR QT +P
Sbjct: 208 WTFRHIYRGQPKRHLLTTGWSLFVGSKRLRAGDSVLFIRDEKSQLMVGVRRANRQQTALP 267
Query: 543 SSVLSSDSMXXXXXXXXXXXXSTNSRFTIFYNPRASPSEFVIPLAKYIKAVYHTCVSVGM 722
SSVLS+DSM + + F IFYNPRA P+EFVIPLAKY KA+ + +SVGM
Sbjct: 268 SSVLSADSMHIGVLAAAAHATANRTPFLIFYNPRACPAEFVIPLAKYRKAICGSQLSVGM 327
Query: 723 RFRMLFETEESSVRRYMGTITGISDVDAARWPNSHWRSVKVGWDESTAGERQPRVSLWEI 902
RF M+FETE+S RRYMGTI GISD+D RWP S WR+++V WDE ++ RVS W+I
Sbjct: 328 RFGMMFETEDSGKRRYMGTIVGISDLDPLRWPGSKWRNLQVEWDEPGCNDKPTRVSPWDI 387
Query: 903 EPLTTFPMYPSPFPLRLKRPWPPGLPSFTGMREDDLSMNTPLM 1031
E + ++PS LKR P F G E + PL+
Sbjct: 388 ETPESLFIFPS-LTSGLKRQLHPSY--FAGETEWGSLIKRPLI 427
>TAIR9_protein||AT5G62000.1 | Symbols: ARF2, ARF1-BP, HSS | ARF2 (AUXIN RESPONSE
FACTOR 2); protein binding / transcription factor |
chr5:24910859-24914680 FORWARD
Length = 860
Score = 329 bits (841), Expect = 4e-090
Identities = 167/321 (52%), Positives = 222/321 (69%), Gaps = 4/321 (1%)
Frame = +3
Query: 3 TNKEVDAHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLNPQEQKDGYLPAGL 182
TN+ + +P Y LP +L+C++ NV + A+ +TDEVYAQ+TL P Q++ A L
Sbjct: 95 TNQAAEQQMPLY-DLPSKLLCRVINVDLKAEADTDEVYAQITLLPEANQDENAIEKEAPL 153
Query: 183 GSPNKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNE 362
P + + FCKTLTASDTSTHGGFSV RR A++ PPLD S+QPP QEL+A+DLH NE
Sbjct: 154 PPPPRFQVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANE 213
Query: 363 WKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMP 542
W+FRHIFRGQP+RHLL +GWSVFVS+KRLVAGD+ +F+ E +L +G+RRA R Q +P
Sbjct: 214 WRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVP 273
Query: 543 SSVLSSDSMXXXXXXXXXXXXSTNSRFTIFYNPRASPSEFVIPLAKYIKAVYHTCVSVGM 722
SSV+SS SM ST + FT++Y PR SPSEF++P +Y+++V + S+GM
Sbjct: 274 SSVISSHSMHLGVLATAWHAISTGTMFTVYYKPRTSPSEFIVPFDQYMESVKNN-YSIGM 332
Query: 723 RFRMLFETEESSVRRYMGTITGISDVDAARWPNSHWRSVKVGWDESTAGERQPRVSLWEI 902
RF+M FE EE+ +R+ GTI GI + D RWP S WRS+KV WDE+++ R RVS W++
Sbjct: 333 RFKMRFEGEEAPEQRFTGTIVGIEESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKV 392
Query: 903 EPLTTFP-MYPSPFPLRLKRP 962
EP P + P P P R KRP
Sbjct: 393 EPALAPPALSPVPMP-RPKRP 412
>TAIR9_protein||AT5G62000.2 | Symbols: ARF2, ARF1-BP, HSS | ARF2 (AUXIN RESPONSE
FACTOR 2); protein binding / transcription factor |
chr5:24910859-24914680 FORWARD
Length = 860
Score = 329 bits (841), Expect = 4e-090
Identities = 167/321 (52%), Positives = 222/321 (69%), Gaps = 4/321 (1%)
Frame = +3
Query: 3 TNKEVDAHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLNPQEQKDGYLPAGL 182
TN+ + +P Y LP +L+C++ NV + A+ +TDEVYAQ+TL P Q++ A L
Sbjct: 95 TNQAAEQQMPLY-DLPSKLLCRVINVDLKAEADTDEVYAQITLLPEANQDENAIEKEAPL 153
Query: 183 GSPNKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNE 362
P + + FCKTLTASDTSTHGGFSV RR A++ PPLD S+QPP QEL+A+DLH NE
Sbjct: 154 PPPPRFQVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANE 213
Query: 363 WKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMP 542
W+FRHIFRGQP+RHLL +GWSVFVS+KRLVAGD+ +F+ E +L +G+RRA R Q +P
Sbjct: 214 WRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVP 273
Query: 543 SSVLSSDSMXXXXXXXXXXXXSTNSRFTIFYNPRASPSEFVIPLAKYIKAVYHTCVSVGM 722
SSV+SS SM ST + FT++Y PR SPSEF++P +Y+++V + S+GM
Sbjct: 274 SSVISSHSMHLGVLATAWHAISTGTMFTVYYKPRTSPSEFIVPFDQYMESVKNN-YSIGM 332
Query: 723 RFRMLFETEESSVRRYMGTITGISDVDAARWPNSHWRSVKVGWDESTAGERQPRVSLWEI 902
RF+M FE EE+ +R+ GTI GI + D RWP S WRS+KV WDE+++ R RVS W++
Sbjct: 333 RFKMRFEGEEAPEQRFTGTIVGIEESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKV 392
Query: 903 EPLTTFP-MYPSPFPLRLKRP 962
EP P + P P P R KRP
Sbjct: 393 EPALAPPALSPVPMP-RPKRP 412
>TAIR9_protein||AT5G62000.3 | Symbols: ARF2, ARF1-BP, HSS | ARF2 (AUXIN RESPONSE
FACTOR 2); protein binding / transcription factor |
chr5:24910859-24914680 FORWARD
Length = 860
Score = 329 bits (841), Expect = 4e-090
Identities = 167/321 (52%), Positives = 222/321 (69%), Gaps = 4/321 (1%)
Frame = +3
Query: 3 TNKEVDAHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLNPQEQKDGYLPAGL 182
TN+ + +P Y LP +L+C++ NV + A+ +TDEVYAQ+TL P Q++ A L
Sbjct: 95 TNQAAEQQMPLY-DLPSKLLCRVINVDLKAEADTDEVYAQITLLPEANQDENAIEKEAPL 153
Query: 183 GSPNKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNE 362
P + + FCKTLTASDTSTHGGFSV RR A++ PPLD S+QPP QEL+A+DLH NE
Sbjct: 154 PPPPRFQVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANE 213
Query: 363 WKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMP 542
W+FRHIFRGQP+RHLL +GWSVFVS+KRLVAGD+ +F+ E +L +G+RRA R Q +P
Sbjct: 214 WRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVP 273
Query: 543 SSVLSSDSMXXXXXXXXXXXXSTNSRFTIFYNPRASPSEFVIPLAKYIKAVYHTCVSVGM 722
SSV+SS SM ST + FT++Y PR SPSEF++P +Y+++V + S+GM
Sbjct: 274 SSVISSHSMHLGVLATAWHAISTGTMFTVYYKPRTSPSEFIVPFDQYMESVKNN-YSIGM 332
Query: 723 RFRMLFETEESSVRRYMGTITGISDVDAARWPNSHWRSVKVGWDESTAGERQPRVSLWEI 902
RF+M FE EE+ +R+ GTI GI + D RWP S WRS+KV WDE+++ R RVS W++
Sbjct: 333 RFKMRFEGEEAPEQRFTGTIVGIEESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKV 392
Query: 903 EPLTTFP-MYPSPFPLRLKRP 962
EP P + P P P R KRP
Sbjct: 393 EPALAPPALSPVPMP-RPKRP 412
>TAIR9_protein||AT1G59750.1 | Symbols: ARF1 | ARF1 (AUXIN RESPONSE FACTOR 1);
DNA binding / transcription factor | chr1:21980414-21984193 FORWARD
Length = 666
Score = 318 bits (813), Expect = 7e-087
Identities = 166/326 (50%), Positives = 223/326 (68%), Gaps = 7/326 (2%)
Frame = +3
Query: 15 VDAHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLNPQEQKDGYLPAGLGSPN 194
++ +P++ +LP +++C++ N+ A+ ETDEVYAQ+TL P Q + A + P
Sbjct: 60 LEQQMPSF-NLPSKILCKVINIQRRAEPETDEVYAQITLLPELDQSEPTS-PDAPVQEPE 117
Query: 195 KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFR 374
K + FCKTLTASDTSTHGGFSV RR A+ PPLD SQQPP QEL+A DLH++EW FR
Sbjct: 118 KCTVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFR 177
Query: 375 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVL 554
HIFRGQP+RHLLTTGWSVFVS+K+LVAGD+ +F+ E +L +G+RR R QT +PSSV+
Sbjct: 178 HIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVI 237
Query: 555 SSDSMXXXXXXXXXXXXSTNSRFTIFYNPRASPSEFVIPLAKYIKAVYHTCVSVGMRFRM 734
SS SM +T + F++FY PR S SEF++ + +Y++A +SVGMRF+M
Sbjct: 238 SSHSMHIGVLATAAHAITTGTIFSVFYKPRTSRSEFIVSVNRYLEAKTQK-LSVGMRFKM 296
Query: 735 LFETEESSVRRYMGTITGISDVDAARWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL- 911
FE EE+ +R+ GTI G+ + ++ W +S WRS+KV WDE ++ R RVS WE+EPL
Sbjct: 297 RFEGEEAPEKRFSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLV 356
Query: 912 --TTFPMYPSPFPLRLKRPWPPGLPS 983
+T P P P R KRP PPGLPS
Sbjct: 357 ANSTPSSQPQP-PQRNKRPRPPGLPS 381
>TAIR9_protein||AT1G59750.2 | Symbols: ARF1 | ARF1 (AUXIN RESPONSE FACTOR 1);
DNA binding / transcription factor | chr1:21980414-21984193 FORWARD
Length = 663
Score = 318 bits (813), Expect = 7e-087
Identities = 166/326 (50%), Positives = 223/326 (68%), Gaps = 7/326 (2%)
Frame = +3
Query: 15 VDAHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLNPQEQKDGYLPAGLGSPN 194
++ +P++ +LP +++C++ N+ A+ ETDEVYAQ+TL P Q + A + P
Sbjct: 60 LEQQMPSF-NLPSKILCKVINIQRRAEPETDEVYAQITLLPELDQSEPTS-PDAPVQEPE 117
Query: 195 KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFR 374
K + FCKTLTASDTSTHGGFSV RR A+ PPLD SQQPP QEL+A DLH++EW FR
Sbjct: 118 KCTVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFR 177
Query: 375 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVL 554
HIFRGQP+RHLLTTGWSVFVS+K+LVAGD+ +F+ E +L +G+RR R QT +PSSV+
Sbjct: 178 HIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVI 237
Query: 555 SSDSMXXXXXXXXXXXXSTNSRFTIFYNPRASPSEFVIPLAKYIKAVYHTCVSVGMRFRM 734
SS SM +T + F++FY PR S SEF++ + +Y++A +SVGMRF+M
Sbjct: 238 SSHSMHIGVLATAAHAITTGTIFSVFYKPRTSRSEFIVSVNRYLEAKTQK-LSVGMRFKM 296
Query: 735 LFETEESSVRRYMGTITGISDVDAARWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL- 911
FE EE+ +R+ GTI G+ + ++ W +S WRS+KV WDE ++ R RVS WE+EPL
Sbjct: 297 RFEGEEAPEKRFSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLV 356
Query: 912 --TTFPMYPSPFPLRLKRPWPPGLPS 983
+T P P P R KRP PPGLPS
Sbjct: 357 ANSTPSSQPQP-PQRNKRPRPPGLPS 381
>TAIR9_protein||AT1G59750.3 | Symbols: ARF1 | ARF1 (AUXIN RESPONSE FACTOR 1);
DNA binding / transcription factor | chr1:21980414-21984193 FORWARD
Length = 666
Score = 318 bits (813), Expect = 7e-087
Identities = 166/326 (50%), Positives = 223/326 (68%), Gaps = 7/326 (2%)
Frame = +3
Query: 15 VDAHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLNPQEQKDGYLPAGLGSPN 194
++ +P++ +LP +++C++ N+ A+ ETDEVYAQ+TL P Q + A + P
Sbjct: 60 LEQQMPSF-NLPSKILCKVINIQRRAEPETDEVYAQITLLPELDQSEPTS-PDAPVQEPE 117
Query: 195 KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFR 374
K + FCKTLTASDTSTHGGFSV RR A+ PPLD SQQPP QEL+A DLH++EW FR
Sbjct: 118 KCTVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFR 177
Query: 375 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVL 554
HIFRGQP+RHLLTTGWSVFVS+K+LVAGD+ +F+ E +L +G+RR R QT +PSSV+
Sbjct: 178 HIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVI 237
Query: 555 SSDSMXXXXXXXXXXXXSTNSRFTIFYNPRASPSEFVIPLAKYIKAVYHTCVSVGMRFRM 734
SS SM +T + F++FY PR S SEF++ + +Y++A +SVGMRF+M
Sbjct: 238 SSHSMHIGVLATAAHAITTGTIFSVFYKPRTSRSEFIVSVNRYLEAKTQK-LSVGMRFKM 296
Query: 735 LFETEESSVRRYMGTITGISDVDAARWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL- 911
FE EE+ +R+ GTI G+ + ++ W +S WRS+KV WDE ++ R RVS WE+EPL
Sbjct: 297 RFEGEEAPEKRFSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLV 356
Query: 912 --TTFPMYPSPFPLRLKRPWPPGLPS 983
+T P P P R KRP PPGLPS
Sbjct: 357 ANSTPSSQPQP-PQRNKRPRPPGLPS 381
>TAIR9_protein||AT5G60450.1 | Symbols: ARF4 | ARF4 (AUXIN RESPONSE FACTOR 4);
transcription factor | chr5:24308558-24312187 REVERSE
Length = 789
Score = 316 bits (808), Expect = 3e-086
Identities = 170/335 (50%), Positives = 216/335 (64%), Gaps = 20/335 (5%)
Frame = +3
Query: 27 IPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLNP--------QEQKD--GYLPA 176
IP + L PQ++C++ NV + A+ +TDEVY Q+TL PL +E K+ G
Sbjct: 106 IPKF-DLNPQIVCRVVNVQLLANKDTDEVYTQVTLLPLQEFSMLNGEGKEVKELGGEEER 164
Query: 177 GLGSPNKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHD 356
S K+ + FCKTLTASDTSTHGGFSVPRRAAE F PLD+ QQ P+QELIA+DLH
Sbjct: 165 NGSSSVKRTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFAPLDYKQQRPSQELIAKDLHG 224
Query: 357 NEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTV 536
EWKFRHI+RGQP+RHLLTTGWS+FVS K LV+GD+VLF+ +E +L LGIRRA RP+
Sbjct: 225 VEWKFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRDEGGELRLGIRRAARPRNG 284
Query: 537 MPSSVLSSDSMXXXXXXXXXXXXSTNSRFTIFYNPRASPSEFVIPLAKYIKAVYHTCVSV 716
+P S++ +S ST S F +FY+PRA+ +EFVIP KYI ++ + V +
Sbjct: 285 LPDSIIEKNSC-SNILSLVANAVSTKSMFHVFYSPRATHAEFVIPYEKYITSI-RSPVCI 342
Query: 717 GMRFRMLFETEESSVRRYMGTITGISDVDAARWPNSHWRSVKVGWDESTAGERQPRVSLW 896
G RFRM FE ++S RR G +TG+ D+D RWPNS WR + V WDES + Q RVS W
Sbjct: 343 GTRFRMRFEMDDSPERRCAGVVTGVCDLDPYRWPNSKWRCLLVRWDESFVSDHQERVSPW 402
Query: 897 EIEPLTTFPMYPSPFPLRLKRPW-------PPGLP 980
EI+P + P R KRPW PPG P
Sbjct: 403 EIDPSVSLPHLSIQSSPRPKRPWAGLLDTTPPGNP 437
>TAIR9_protein||AT3G61830.1 | Symbols: ARF18 | ARF18 (AUXIN RESPONSE FACTOR 18);
transcription factor | chr3:22888171-22891179 FORWARD
Length = 603
Score = 289 bits (738), Expect = 4e-078
Identities = 153/309 (49%), Positives = 205/309 (66%), Gaps = 6/309 (1%)
Frame = +3
Query: 3 TNKEVDAHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLNPQEQKDGYLPAGL 182
TN+ +++ LPP+++C++ +VT+ A+ ETDEVYAQ+TLQP Q + P +
Sbjct: 59 TNQGINSEEIPVFDLPPKILCRVLDVTLKAEHETDEVYAQITLQPEEDQSEPTSLDPPIV 118
Query: 183 GSPNKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNE 362
G P KQ + F K LTASDTSTHGGFSV R+ A + P LD +Q P QEL+ RDLH E
Sbjct: 119 G-PTKQEFHSFVKILTASDTSTHGGFSVLRKHATECLPSLDMTQATPTQELVTRDLHGFE 177
Query: 363 WKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMP 542
W+F+HIFRGQP+RHLLTTGWS FVS+KRLVAGD+ +F+ E L +G+RR R Q+ MP
Sbjct: 178 WRFKHIFRGQPRRHLLTTGWSTFVSSKRLVAGDAFVFLRGENGDLRVGVRRLARHQSTMP 237
Query: 543 SSVLSSDSMXXXXXXXXXXXXSTNSRFTIFYNPRASPSEFVIPLAKYIKAVYHTCVSVGM 722
+SV+SS SM T + F +FY PR S+F++ + KY++A+ H S+G
Sbjct: 238 TSVISSQSMHLGVLATASHAVRTTTIFVVFYKPRI--SQFIVGVNKYMEAIKHG-FSLGT 294
Query: 723 RFRMLFETEESSVRRYMGTITGISDVDAARWPNSHWRSVKVGWDESTAGERQPRVSLWEI 902
RFRM FE EES R + GTI G D+ +++WP S WRS++V WDE T +R +VS WEI
Sbjct: 295 RFRMRFEGEESPERIFTGTIVGSGDL-SSQWPASKWRSLQVQWDEPTTVQRPDKVSPWEI 353
Query: 903 EP-LTTFPM 926
EP L T P+
Sbjct: 354 EPFLATSPI 362
>TAIR9_protein||AT2G46530.1 | Symbols: ARF11 | ARF11 (AUXIN RESPONSE FACTOR 11);
transcription factor | chr2:19104993-19108029 FORWARD
Length = 602
Score = 288 bits (735), Expect = 8e-078
Identities = 153/326 (46%), Positives = 212/326 (65%), Gaps = 6/326 (1%)
Frame = +3
Query: 15 VDAHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLNPQEQKDGYLPAGLGSPN 194
VD IP + +LPP+++C++ +VT+ A+ ETDEVYAQ+TLQP Q + P L P
Sbjct: 60 VDQEIPVF-NLPPKILCRVLSVTLKAEHETDEVYAQITLQPEEDQSEPTSLDPP-LVEPA 117
Query: 195 KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFR 374
K + F K LTASDTSTHGGFSV R+ A + P LD +Q P QEL+ARDLH EW+F+
Sbjct: 118 KPTVDSFVKILTASDTSTHGGFSVLRKHATECLPSLDMTQPTPTQELVARDLHGYEWRFK 177
Query: 375 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVL 554
HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+ E L +G+RR + Q+ MP+SV+
Sbjct: 178 HIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGETGDLRVGVRRLAKQQSTMPASVI 237
Query: 555 SSDSMXXXXXXXXXXXXSTNSRFTIFYNPRASPSEFVIPLAKYIKAVYHTCVSVGMRFRM 734
SS SM +T + F +FY PR S+F+I + KY+ A+ + S+GMR+RM
Sbjct: 238 SSQSMRLGVLATASHAVTTTTIFVVFYKPRI--SQFIISVNKYMMAMKNG-FSLGMRYRM 294
Query: 735 LFETEESSVRRYMGTITGISDVDAARWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 914
FE EES R + GTI G D+ +++WP S WRS+++ WDE ++ +R +VS WEIEP +
Sbjct: 295 RFEGEESPERIFTGTIIGSGDL-SSQWPASKWRSLQIQWDEPSSIQRPNKVSPWEIEPFS 353
Query: 915 TFPMYPSPFPLRLKRPWPPGLPSFTG 992
+ P+P + K + TG
Sbjct: 354 PSALTPTPTQQQSKSKRSRPISEITG 379
>TAIR9_protein||AT2G46530.3 | Symbols: ARF11 | ARF11 (AUXIN RESPONSE FACTOR 11);
transcription factor | chr2:19105112-19108029 FORWARD
Length = 623
Score = 288 bits (735), Expect = 8e-078
Identities = 153/326 (46%), Positives = 212/326 (65%), Gaps = 6/326 (1%)
Frame = +3
Query: 15 VDAHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLNPQEQKDGYLPAGLGSPN 194
VD IP + +LPP+++C++ +VT+ A+ ETDEVYAQ+TLQP Q + P L P
Sbjct: 81 VDQEIPVF-NLPPKILCRVLSVTLKAEHETDEVYAQITLQPEEDQSEPTSLDPP-LVEPA 138
Query: 195 KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFR 374
K + F K LTASDTSTHGGFSV R+ A + P LD +Q P QEL+ARDLH EW+F+
Sbjct: 139 KPTVDSFVKILTASDTSTHGGFSVLRKHATECLPSLDMTQPTPTQELVARDLHGYEWRFK 198
Query: 375 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVL 554
HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+ E L +G+RR + Q+ MP+SV+
Sbjct: 199 HIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGETGDLRVGVRRLAKQQSTMPASVI 258
Query: 555 SSDSMXXXXXXXXXXXXSTNSRFTIFYNPRASPSEFVIPLAKYIKAVYHTCVSVGMRFRM 734
SS SM +T + F +FY PR S+F+I + KY+ A+ + S+GMR+RM
Sbjct: 259 SSQSMRLGVLATASHAVTTTTIFVVFYKPRI--SQFIISVNKYMMAMKNG-FSLGMRYRM 315
Query: 735 LFETEESSVRRYMGTITGISDVDAARWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 914
FE EES R + GTI G D+ +++WP S WRS+++ WDE ++ +R +VS WEIEP +
Sbjct: 316 RFEGEESPERIFTGTIIGSGDL-SSQWPASKWRSLQIQWDEPSSIQRPNKVSPWEIEPFS 374
Query: 915 TFPMYPSPFPLRLKRPWPPGLPSFTG 992
+ P+P + K + TG
Sbjct: 375 PSALTPTPTQQQSKSKRSRPISEITG 400
>TAIR9_protein||AT4G23980.1 | Symbols: ARF9 | ARF9 (AUXIN RESPONSE FACTOR 9);
transcription factor | chr4:12451592-12454737 FORWARD
Length = 639
Score = 285 bits (728), Expect = 5e-077
Identities = 145/306 (47%), Positives = 197/306 (64%), Gaps = 4/306 (1%)
Frame = +3
Query: 45 LPPQLICQLHNVTMHADVETDEVYAQMTLQPLNPQEQKDGYLPAGLGSPNKQPTNYFCKT 224
LPP+++C + NV++ A+ +TDEVYAQ+TL P+ + + + + F K
Sbjct: 60 LPPKILCNVMNVSLQAEKDTDEVYAQITLIPVGTEVDEPMSPDPSPPELQRPKVHSFSKV 119
Query: 225 LTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRH 404
LTASDTSTHGGFSV R+ A + PPLD +QQ P QEL+A D+H +WKF+HIFRGQP+RH
Sbjct: 120 LTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAEDVHGYQWKFKHIFRGQPRRH 179
Query: 405 LLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMXXXXX 584
LLTTGWS FV++KRLVAGD+ +F+ E +L +G+RRAN Q+ MPSSV+SS SM
Sbjct: 180 LLTTGWSTFVTSKRLVAGDTFVFLRGENGELRVGVRRANLQQSSMPSSVISSHSMHLGVL 239
Query: 585 XXXXXXXSTNSRFTIFYNPRASPSEFVIPLAKYIKAVYHTCVSVGMRFRMLFETEESSVR 764
T + F ++Y PR S+F+I L KY++A+ + SVGMRF+M FE E+S R
Sbjct: 240 ATARHATQTKTMFIVYYKPRT--SQFIISLNKYLEAMSNK-FSVGMRFKMRFEGEDSPER 296
Query: 765 RYMGTITGISDVDAARWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFP 944
RY GT+ G+ D + W +S WR ++V WDE + R +VS WEIEP P
Sbjct: 297 RYSGTVIGVKDC-SPHWKDSKWRCLEVHWDEPASISRPNKVSPWEIEPFVNSENVPKSVM 355
Query: 945 LRLKRP 962
L+ KRP
Sbjct: 356 LKNKRP 361
>TAIR9_protein||AT4G23980.2 | Symbols: ARF9 | ARF9 (AUXIN RESPONSE FACTOR 9);
transcription factor | chr4:12451592-12454737 FORWARD
Length = 637
Score = 285 bits (728), Expect = 5e-077
Identities = 145/306 (47%), Positives = 197/306 (64%), Gaps = 4/306 (1%)
Frame = +3
Query: 45 LPPQLICQLHNVTMHADVETDEVYAQMTLQPLNPQEQKDGYLPAGLGSPNKQPTNYFCKT 224
LPP+++C + NV++ A+ +TDEVYAQ+TL P+ + + + + F K
Sbjct: 60 LPPKILCNVMNVSLQAEKDTDEVYAQITLIPVGTEVDEPMSPDPSPPELQRPKVHSFSKV 119
Query: 225 LTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRH 404
LTASDTSTHGGFSV R+ A + PPLD +QQ P QEL+A D+H +WKF+HIFRGQP+RH
Sbjct: 120 LTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAEDVHGYQWKFKHIFRGQPRRH 179
Query: 405 LLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMXXXXX 584
LLTTGWS FV++KRLVAGD+ +F+ E +L +G+RRAN Q+ MPSSV+SS SM
Sbjct: 180 LLTTGWSTFVTSKRLVAGDTFVFLRGENGELRVGVRRANLQQSSMPSSVISSHSMHLGVL 239
Query: 585 XXXXXXXSTNSRFTIFYNPRASPSEFVIPLAKYIKAVYHTCVSVGMRFRMLFETEESSVR 764
T + F ++Y PR S+F+I L KY++A+ + SVGMRF+M FE E+S R
Sbjct: 240 ATARHATQTKTMFIVYYKPRT--SQFIISLNKYLEAMSNK-FSVGMRFKMRFEGEDSPER 296
Query: 765 RYMGTITGISDVDAARWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFP 944
RY GT+ G+ D + W +S WR ++V WDE + R +VS WEIEP P
Sbjct: 297 RYSGTVIGVKDC-SPHWKDSKWRCLEVHWDEPASISRPNKVSPWEIEPFVNSENVPKSVM 355
Query: 945 LRLKRP 962
L+ KRP
Sbjct: 356 LKNKRP 361
>TAIR9_protein||AT2G33860.1 | Symbols: ETT, ARF3 | ETT (ETTIN); DNA binding /
transcription factor | chr2:14325444-14328613 REVERSE
Length = 609
Score = 262 bits (668), Expect = 5e-070
Identities = 131/233 (56%), Positives = 165/233 (70%), Gaps = 3/233 (1%)
Frame = +3
Query: 213 FCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQ 392
FCKTLTASDTSTHGGFSVPRRAAE FPPLD+SQ P+QEL+ARDLH EW+FRHI+RGQ
Sbjct: 159 FCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQPRPSQELLARDLHGLEWRFRHIYRGQ 218
Query: 393 PKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMX 572
P+RHLLTTGWS FV+ K+LV+GD+VLF+ + +L LG+RRA++ + S + +M
Sbjct: 219 PRRHLLTTGWSAFVNKKKLVSGDAVLFLRGDDGKLRLGVRRASQIEGTAALSAQYNQNMN 278
Query: 573 XXXXXXXXXXXSTNSRFTIFYNPRASPSEFVIPLAKYIKAV-YHTCVSVGMRFRMLFETE 749
ST+S F+I YNP+AS S F+IP K++K V Y C +GMRF+ E+E
Sbjct: 279 HNNFSEVAHAISTHSVFSISYNPKASWSNFIIPAPKFLKVVDYPFC--IGMRFKARVESE 336
Query: 750 ESSVRRYMGTITGISDVDAARWPNSHWRSVKVGWDESTAGERQPRVSLWEIEP 908
++S RR G I+GISD+D RWP S WR + V WD+ A Q RVS WEIEP
Sbjct: 337 DASERRSPGIISGISDLDPIRWPGSKWRCLLVRWDDIVANGHQQRVSPWEIEP 389
>TAIR9_protein||AT2G46530.2 | Symbols: ARF11 | ARF11 (AUXIN RESPONSE FACTOR 11);
transcription factor | chr2:19105511-19108029 FORWARD
Length = 515
Score = 247 bits (628), Expect = 2e-065
Identities = 128/271 (47%), Positives = 175/271 (64%), Gaps = 4/271 (1%)
Frame = +3
Query: 180 LGSPNKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDN 359
L P K + F K LTASDTSTHGGFSV R+ A + P LD +Q P QEL+ARDLH
Sbjct: 26 LVEPAKPTVDSFVKILTASDTSTHGGFSVLRKHATECLPSLDMTQPTPTQELVARDLHGY 85
Query: 360 EWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVM 539
EW+F+HIFRGQP+RHLLTTGWS FV++KRLVAGD+ +F+ E L +G+RR + Q+ M
Sbjct: 86 EWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGETGDLRVGVRRLAKQQSTM 145
Query: 540 PSSVLSSDSMXXXXXXXXXXXXSTNSRFTIFYNPRASPSEFVIPLAKYIKAVYHTCVSVG 719
P+SV+SS SM +T + F +FY PR S+F+I + KY+ A+ + S+G
Sbjct: 146 PASVISSQSMRLGVLATASHAVTTTTIFVVFYKPRI--SQFIISVNKYMMAMKNG-FSLG 202
Query: 720 MRFRMLFETEESSVRRYMGTITGISDVDAARWPNSHWRSVKVGWDESTAGERQPRVSLWE 899
MR+RM FE EES R + GTI G D+ +++WP S WRS+++ WDE ++ +R +VS WE
Sbjct: 203 MRYRMRFEGEESPERIFTGTIIGSGDL-SSQWPASKWRSLQIQWDEPSSIQRPNKVSPWE 261
Query: 900 IEPLTTFPMYPSPFPLRLKRPWPPGLPSFTG 992
IEP + + P+P + K + TG
Sbjct: 262 IEPFSPSALTPTPTQQQSKSKRSRPISEITG 292
>TAIR9_protein||AT1G34410.1 | Symbols: ARF21 | ARF21 (AUXIN RESPONSE FACTOR 21);
transcription factor | chr1:12577722-12580824 FORWARD
Length = 607
Score = 235 bits (598), Expect = 6e-062
Identities = 128/305 (41%), Positives = 182/305 (59%), Gaps = 8/305 (2%)
Frame = +3
Query: 45 LPPQLICQLHNVTMHADVETDEVYAQMTLQPLNPQEQKDGYLPAGLGSPNKQPTNYFCKT 224
LP +L C++ + + + +DE+YA++TL P Q +P + + N F K
Sbjct: 74 LPSKLQCRVIAIHLKVENNSDEIYAEITLMPDTTQV----VIPTQSENRFRPLVNSFTKV 129
Query: 225 LTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRH 404
LTASDTS +GGFSVP++ A + PPLD SQ PAQE++A DLHDN+W+FRH +RG P+RH
Sbjct: 130 LTASDTSAYGGFSVPKKHAIECLPPLDMSQPLPAQEILAIDLHDNQWRFRHNYRGTPQRH 189
Query: 405 LLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMXXXXX 584
LTTGW+ F+++K+LV GD ++F+ E +L +GIRRA Q +PSS++S D M
Sbjct: 190 SLTTGWNEFITSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVI 249
Query: 585 XXXXXXXSTNSRFTIFYNPRASPSEFVIPLAKYIKAVYHTCVSVGMRFRMLFETEESSVR 764
F + Y PR+ S+F++ K++ AV + +VG RF M FE ++ S R
Sbjct: 250 ASAKHAFDNQCIFIVVYKPRS--SQFIVSYDKFLDAV-NNKFNVGSRFTMRFEGDDFSER 306
Query: 765 RYMGTITGISDVDAARWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFP 944
RY GTI G+SD + W S WRS++V WDE + R +VS WEIE L P
Sbjct: 307 RYFGTIIGVSDF-SPHWKCSEWRSLEVQWDEFASFSRPNKVSPWEIEHLVPALNVPRSSL 365
Query: 945 LRLKR 959
L+ KR
Sbjct: 366 LKNKR 370
>TAIR9_protein||AT1G34390.1 | Symbols: ARF22 | ARF22 (AUXIN RESPONSE FACTOR 22);
transcription factor | chr1:12556005-12559082 FORWARD
Length = 599
Score = 228 bits (581), Expect = 6e-060
Identities = 127/305 (41%), Positives = 179/305 (58%), Gaps = 10/305 (3%)
Frame = +3
Query: 45 LPPQLICQLHNVTMHADVETDEVYAQMTLQPLNPQEQKDGYLPAGLGSPNKQPTNYFCKT 224
LP +L C++ + + + +DE YA++TL P Q +P + + N F K
Sbjct: 74 LPSKLQCRVIAIQLKVENNSDETYAEITLMPDTTQV----VIPTQNENQFRPLVNSFTKV 129
Query: 225 LTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRH 404
LTASDTS GGF VP++ A + PPLD SQ P QEL+A DLH N+W+F H +RG P+RH
Sbjct: 130 LTASDTS--GGFFVPKKHAIECLPPLDMSQPLPTQELLATDLHGNQWRFNHNYRGTPQRH 187
Query: 405 LLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMXXXXX 584
LLTTGW+ F ++K+LVAGD ++F+ E +L +GIRRA Q +PSS++S +SM
Sbjct: 188 LLTTGWNAFTTSKKLVAGDVIVFVRGETGELRVGIRRAGHQQGNIPSSIISIESMRHGVI 247
Query: 585 XXXXXXXSTNSRFTIFYNPRASPSEFVIPLAKYIKAVYHTCVSVGMRFRMLFETEESSVR 764
F + Y PR+ S+F++ K++ AV + +VG RF M FE ++ S R
Sbjct: 248 ASAKHAFDNQCMFIVVYKPRS--SQFIVSYDKFLDAV-NNKFNVGSRFTMRFEGDDFSER 304
Query: 765 RYMGTITGISDVDAARWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFP 944
RY GTI G+SD + W S WR+++V WDE + R +VS WEIE L P P
Sbjct: 305 RYFGTIIGVSDF-SPHWKCSEWRNLEVQWDEFASFSRPNKVSPWEIEHLMPALNVPRPSL 363
Query: 945 LRLKR 959
L+ KR
Sbjct: 364 LKNKR 368
>TAIR9_protein||AT1G34310.1 | Symbols: ARF12 | ARF12 (AUXIN RESPONSE FACTOR 12);
transcription factor | chr1:12508548-12511520 REVERSE
Length = 594
Score = 228 bits (581), Expect = 6e-060
Identities = 127/305 (41%), Positives = 178/305 (58%), Gaps = 8/305 (2%)
Frame = +3
Query: 45 LPPQLICQLHNVTMHADVETDEVYAQMTLQPLNPQEQKDGYLPAGLGSPNKQPTNYFCKT 224
LP +L C++ + + + +DE YA++TL P Q +P + + N F K
Sbjct: 74 LPSKLQCRVIAIHLKVENNSDETYAEITLMPDTTQV----VIPTQNENQFRPLVNSFTKV 129
Query: 225 LTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRH 404
LTASDTS HGGF VP++ A + P LD SQ PAQEL+A DLH N+W+F H +RG P+RH
Sbjct: 130 LTASDTSAHGGFFVPKKHAIECLPSLDMSQPLPAQELLAIDLHGNQWRFNHNYRGTPQRH 189
Query: 405 LLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMXXXXX 584
LLTTGW+ F ++K+LVAGD ++F+ E +L +GIRRA Q +PSS++S D M
Sbjct: 190 LLTTGWNAFTTSKKLVAGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVV 249
Query: 585 XXXXXXXSTNSRFTIFYNPRASPSEFVIPLAKYIKAVYHTCVSVGMRFRMLFETEESSVR 764
FT+ Y PR+ S+F++ K++ AV + +VG RF M E ++ S R
Sbjct: 250 ASAKHAFDNQCMFTVVYKPRS--SKFIVSYDKFLDAV-NNKFNVGSRFTMRLEGDDFSER 306
Query: 765 RYMGTITGISDVDAARWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFP 944
R GTI G+SD + W S WRS++V WDE T+ +VS W+IE L P F
Sbjct: 307 RCFGTIIGVSDF-SPHWKCSEWRSLEVQWDEFTSFPGPKKVSPWDIEHLMPAINVPRSFL 365
Query: 945 LRLKR 959
L+ KR
Sbjct: 366 LKNKR 370
>TAIR9_protein||AT1G35540.1 | Symbols: ARF14 | ARF14 (AUXIN RESPONSE FACTOR 14);
transcription factor | chr1:13108634-13111700 FORWARD
Length = 606
Score = 225 bits (571), Expect = 8e-059
Identities = 120/289 (41%), Positives = 172/289 (59%), Gaps = 8/289 (2%)
Frame = +3
Query: 48 PPQLICQLHNVTMHADVETDEVYAQMTLQPLNPQEQKDGYLPAGLGSPNKQPTNYFCKTL 227
P +L C++ + + + +DE YA++TL P Q +P + + N F K L
Sbjct: 75 PSKLQCRVIAIQLKVENNSDETYAEITLMPDTTQV----VIPTQNQNQFRPLVNSFTKVL 130
Query: 228 TASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHL 407
TASDTS HGGFSVP++ A + PPLD SQ P QE++A DLH N+W+FRHI+RG +RHL
Sbjct: 131 TASDTSVHGGFSVPKKHAIECLPPLDMSQPLPTQEILAIDLHGNQWRFRHIYRGTAQRHL 190
Query: 408 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMXXXXXX 587
LT GW+ F ++K+LV GD ++F+ E +L +GIRRA Q +PSS++S +SM
Sbjct: 191 LTIGWNAFTTSKKLVEGDVIVFVRGETGELRVGIRRAGHQQGNIPSSIVSIESMRHGIIA 250
Query: 588 XXXXXXSTNSRFTIFYNPRASPSEFVIPLAKYIKAVYHTCVSVGMRFRMLFETEESSVRR 767
F + Y PR+ S+F++ K++ V + +VG RF M FE ++ S RR
Sbjct: 251 SAKHAFDNQCMFIVVYKPRS--SQFIVSYDKFLDVV-NNKFNVGSRFTMRFEGDDFSERR 307
Query: 768 YMGTITGISDVDAARWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT 914
GTI G+SD + W S WRS++V WDE + R +VS W+IE LT
Sbjct: 308 SFGTIIGVSDF-SPHWKCSEWRSLEVQWDEFASFPRPNQVSPWDIEHLT 355
>TAIR9_protein||AT1G35520.1 | Symbols: ARF15 | ARF15 (AUXIN RESPONSE FACTOR 15);
transcription factor | chr1:13082819-13085830 REVERSE
Length = 599
Score = 223 bits (568), Expect = 2e-058
Identities = 126/306 (41%), Positives = 177/306 (57%), Gaps = 5/306 (1%)
Frame = +3
Query: 45 LPPQLICQLHNVTMHADVETDEVYAQMTLQP-LNPQEQKDGYLPAGLGSPNKQPTNYFCK 221
LP +L C++ + + + +DE YA++TL P E +P + + N F K
Sbjct: 74 LPSKLQCRVIAIHLKVENNSDETYAKITLMPDTTVSENLQVVIPTQNENQFRPLVNSFTK 133
Query: 222 TLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKR 401
LTASD S +G FSVP++ A + PPLD SQ PAQEL+A DLH N+W FRH +RG P+R
Sbjct: 134 VLTASDISANGVFSVPKKHAIECLPPLDMSQPLPAQELLAIDLHGNQWSFRHSYRGTPQR 193
Query: 402 HLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMXXXX 581
HLLTTGW+ F ++K+LV GD ++F+ E +L +GIRRA Q +PSS++S D M
Sbjct: 194 HLLTTGWNEFTTSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGV 253
Query: 582 XXXXXXXXSTNSRFTIFYNPRASPSEFVIPLAKYIKAVYHTCVSVGMRFRMLFETEESSV 761
F + Y PR+ S+F++ K++ AV + +VG RF M FE ++ S
Sbjct: 254 IASAKHAFDNQCMFIVVYKPRS--SQFIVSYDKFLDAV-NNKFNVGSRFTMRFEGDDLSE 310
Query: 762 RRYMGTITGISDVDAARWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPF 941
RRY GTI G+S+ + W S WRS++V WDE + R +VS WEIE L P
Sbjct: 311 RRYFGTIIGVSNF-SPHWKCSDWRSLEVQWDEFASFLRPNKVSPWEIEHLMPALNVPRSS 369
Query: 942 PLRLKR 959
L+ KR
Sbjct: 370 FLKNKR 375
>TAIR9_protein||AT1G34170.1 | Symbols: ARF13 | transcription factor |
chr1:12444265-12446764 REVERSE
Length = 506
Score = 215 bits (545), Expect = 8e-056
Identities = 124/306 (40%), Positives = 175/306 (57%), Gaps = 13/306 (4%)
Frame = +3
Query: 3 TNKEVDAHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLNPQEQKDGYLPAGL 182
T E+D HI LP +L C++ + D TDEVYAQ++L P + +
Sbjct: 59 TRDELD-HIRPIFDLPSKLRCRVVAIDRKVDKNTDEVYAQISLMPDTTE-----VMTHNT 112
Query: 183 GSPNKQPTNY-FCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDN 359
++P Y F K LTASD S GG +P++ A + FPPLD SQ Q L+A+DL+
Sbjct: 113 TMDTRRPIVYFFSKILTASDVSLSGGLIIPKQYAIECFPPLDMSQPISTQNLVAKDLYGQ 172
Query: 360 EWKFRHIFRGQPKRHLLTT--GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQT 533
EW F+H+FRG P+RH+ T+ GWSVF + KRL+ GD + + E +L GIRRA Q
Sbjct: 173 EWSFKHVFRGTPQRHMFTSGGGWSVFATTKRLIVGDIFVLLRGENGELRFGIRRAKHQQG 232
Query: 534 VMPSSVLSSDSMXXXXXXXXXXXXSTNSRFTIFYNPRASPSEFVIPLAKYIKAVYHTCVS 713
+PSSV+S++ M T F + Y P S S+FVI K++ A+ + +
Sbjct: 233 HIPSSVISANCMQHGVIASVVNAFKTKCMFNVVYKP--SSSQFVISYDKFVDAMNNNYI- 289
Query: 714 VGMRFRMLFETEESSVRRYMGTITGISDVDAARWPNSHWRSVKVGWDESTAGERQPRVSL 893
VG RFRM FE ++ S +RY GTI G++D+ + W +S WRS+KV WDE + R +VS
Sbjct: 290 VGSRFRMQFEGKDFSEKRYDGTIIGVNDM-SPHWKDSEWRSLKVQWDELSPFLRPNQVSP 348
Query: 894 WEIEPL 911
W+IE L
Sbjct: 349 WDIEHL 354
>TAIR9_protein||AT1G35240.1 | Symbols: ARF20 | ARF20 (AUXIN RESPONSE FACTOR 20);
transcription factor | chr1:12927457-12930523 REVERSE
Length = 591
Score = 205 bits (519), Expect = 9e-053
Identities = 108/251 (43%), Positives = 150/251 (59%), Gaps = 6/251 (2%)
Frame = +3
Query: 207 NYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFR 386
N F K LTASDTS +GGF VP++ A + PPL PAQEL+A+DLH N+W+FRH +R
Sbjct: 124 NSFTKVLTASDTSAYGGFFVPKKHAIECLPPLPL----PAQELLAKDLHGNQWRFRHSYR 179
Query: 387 GQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDS 566
G P+RH LTTGW+ F ++K+LV GD ++F+ E +L +GIRRA Q +PSS++S D
Sbjct: 180 GTPQRHSLTTGWNEFTTSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDC 239
Query: 567 MXXXXXXXXXXXXSTNSRFTIFYNPRASPSEFVIPLAKYIKAVYHTCVSVGMRFRMLFET 746
M F + Y P S+F++ K++ A+ + + VG RF M FE
Sbjct: 240 MRHGVIASAKHALDNQCIFIVVYKPSIRSSQFIVSYDKFLDAMNNKFI-VGSRFTMRFEG 298
Query: 747 EESSVRRYMGTITGISDVDAARWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPM 926
++ S RRY GTI G++D + W S WRS++V WDE + R +VS WEIE L +
Sbjct: 299 DDFSERRYFGTIIGVNDF-SPHWKCSEWRSLEVQWDEFASFSRPNKVSPWEIEHLMSALN 357
Query: 927 YPSPFPLRLKR 959
P L+ KR
Sbjct: 358 VPRSSLLKNKR 368
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 835,916,284
Number of Sequences: 33410
Number of Extensions: 835916284
Number of Successful Extensions: 46207245
Number of sequences better than 0.0: 0
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