BLASTX 7.6.2
Query= RU02749 /QuerySize=716
(715 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G19990.1 | Symbols: RPT6A, ATSUG1 | RPT6A (REG... 308 3e-084
TAIR9_protein||AT5G20000.1 | Symbols: | 26S proteasome AAA-ATPa... 298 3e-081
TAIR9_protein||AT1G53780.1 | Symbols: | ATP binding / ATPase/ h... 90 1e-018
TAIR9_protein||AT1G45000.1 | Symbols: | 26S proteasome regulato... 89 3e-018
TAIR9_protein||AT1G45000.2 | Symbols: | 26S proteasome regulato... 89 3e-018
TAIR9_protein||AT5G43010.1 | Symbols: RPT4A | RPT4A; ATPase | ch... 88 5e-018
TAIR9_protein||AT2G20140.1 | Symbols: | 26S protease regulatory... 87 9e-018
TAIR9_protein||AT4G29040.1 | Symbols: RPT2a | RPT2a (regulatory ... 87 9e-018
TAIR9_protein||AT1G53750.1 | Symbols: RPT1A | RPT1A (REGULATORY ... 85 3e-017
TAIR9_protein||AT1G09100.1 | Symbols: RPT5B | RPT5B (26S proteas... 74 1e-013
TAIR9_protein||AT3G05530.1 | Symbols: RPT5A, ATS6A.2 | RPT5A (RE... 73 1e-013
TAIR9_protein||AT3G53230.1 | Symbols: | cell division cycle pro... 49 2e-006
TAIR9_protein||AT5G03340.1 | Symbols: | cell division cycle pro... 49 2e-006
TAIR9_protein||AT3G09840.1 | Symbols: CDC48, ATCDC48, CDC48A | C... 49 3e-006
>TAIR9_protein||AT5G19990.1 | Symbols: RPT6A, ATSUG1 | RPT6A (REGULATORY
PARTICLE TRIPLE-A ATPASE 6A); ATPase | chr5:6752144-6754918 FORWARD
Length = 420
Score = 308 bits (787), Expect = 3e-084
Identities = 159/199 (79%), Positives = 168/199 (84%)
Frame = -1
Query: 598 MAAVGVETKPVEALPEDTCSAKLAASKLGEGLRPYYLQHIHELQLQVRQKTHNLNRLEAQ 419
MAAVGV+++ E E+TC+ K AA+K GEGL+ YYLQHIHELQ Q+RQKT+NLNRLEAQ
Sbjct: 1 MAAVGVDSRRPETAMEETCNVKGAAAKQGEGLKQYYLQHIHELQRQLRQKTNNLNRLEAQ 60
Query: 418 RNELNSRVRMLRXXXXXXXXPGSYVGEVVNVMGKNKVLVKVHPEGKYVVXXXXXXXXXXX 239
RNELNSRVRMLR PGSYVGEVV VMGKNKVLVKVHPEGKYVV
Sbjct: 61 RNELNSRVRMLREELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKI 120
Query: 238 XPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELP 59
PSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELP
Sbjct: 121 TPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELP 180
Query: 58 IKHPELFESLGIAQPKGVL 2
IKHPELFESLGIAQPKGVL
Sbjct: 181 IKHPELFESLGIAQPKGVL 199
>TAIR9_protein||AT5G20000.1 | Symbols: | 26S proteasome AAA-ATPase subunit,
putative | chr5:6756915-6759550 FORWARD
Length = 420
Score = 298 bits (762), Expect = 3e-081
Identities = 155/199 (77%), Positives = 163/199 (81%)
Frame = -1
Query: 598 MAAVGVETKPVEALPEDTCSAKLAASKLGEGLRPYYLQHIHELQLQVRQKTHNLNRLEAQ 419
MAAVGVE +P E+TC+ K AA+K GEGL YYLQH+ ELQ R+K++NLNRLEAQ
Sbjct: 1 MAAVGVEARPPVTAMEETCNVKGAAAKQGEGLNKYYLQHLDELQRLQREKSYNLNRLEAQ 60
Query: 418 RNELNSRVRMLRXXXXXXXXPGSYVGEVVNVMGKNKVLVKVHPEGKYVVXXXXXXXXXXX 239
RNELNSRVRMLR PGSYVGEVV VMGKNKVLVKVHPEGKYVV
Sbjct: 61 RNELNSRVRMLREELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKL 120
Query: 238 XPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELP 59
PSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELP
Sbjct: 121 TPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELP 180
Query: 58 IKHPELFESLGIAQPKGVL 2
IKHPELFESLGIAQPKGVL
Sbjct: 181 IKHPELFESLGIAQPKGVL 199
>TAIR9_protein||AT1G53780.1 | Symbols: | ATP binding / ATPase/ hydrolase/
nucleoside-triphosphatase/ nucleotide binding / peptidyl-prolyl
cis-trans isomerase | chr1:20074212-20077235 REVERSE
Length = 599
Score = 90 bits (222), Expect = 1e-018
Identities = 46/104 (44%), Positives = 61/104 (58%)
Frame = -1
Query: 313 KVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKV 134
K +V + GKYVV RV + Y + + LP K+DP V +M VE+
Sbjct: 274 KYVVDIKKIGKYVVGLGDKASPTDIEAGMRVGVDQKKYQIQIPLPPKIDPSVTMMTVEEK 333
Query: 133 PDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVL 2
PD+TY IGG +QI++I+EV+ELP+ HPE F LGI PKGVL
Sbjct: 334 PDATYSDIGGCKEQIEKIREVVELPMLHPEKFVRLGIDPPKGVL 377
>TAIR9_protein||AT1G45000.1 | Symbols: | 26S proteasome regulatory complex
subunit p42D, putative | chr1:17009220-17011607 FORWARD
Length = 400
Score = 89 bits (218), Expect = 3e-018
Identities = 54/163 (33%), Positives = 82/163 (50%), Gaps = 7/163 (4%)
Frame = -1
Query: 490 LQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLRXXXXXXXXPGSYVGEVVNVMGKNK 311
L H EL+ +VR NL + + N+ ++ L+ G +GEV+ + +
Sbjct: 22 LLHHKELESRVRTARENLRAAKKEFNKTEDDLKSLQSV-------GQIIGEVLRPLDNER 74
Query: 310 VLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVP 131
++VK +YVV TRV L + + LP +VDP+V M E
Sbjct: 75 LIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPG 134
Query: 130 DSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVL 2
+ +Y +GGL QI+E++E IELP+ +PELF +GI PKGVL
Sbjct: 135 NISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVL 177
>TAIR9_protein||AT1G45000.2 | Symbols: | 26S proteasome regulatory complex
subunit p42D, putative | chr1:17009220-17011607 FORWARD
Length = 336
Score = 89 bits (218), Expect = 3e-018
Identities = 54/163 (33%), Positives = 82/163 (50%), Gaps = 7/163 (4%)
Frame = -1
Query: 490 LQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLRXXXXXXXXPGSYVGEVVNVMGKNK 311
L H EL+ +VR NL + + N+ ++ L+ G +GEV+ + +
Sbjct: 22 LLHHKELESRVRTARENLRAAKKEFNKTEDDLKSLQSV-------GQIIGEVLRPLDNER 74
Query: 310 VLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVP 131
++VK +YVV TRV L + + LP +VDP+V M E
Sbjct: 75 LIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPG 134
Query: 130 DSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVL 2
+ +Y +GGL QI+E++E IELP+ +PELF +GI PKGVL
Sbjct: 135 NISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVL 177
>TAIR9_protein||AT5G43010.1 | Symbols: RPT4A | RPT4A; ATPase |
chr5:17248563-17251014 REVERSE
Length = 400
Score = 88 bits (216), Expect = 5e-018
Identities = 56/167 (33%), Positives = 84/167 (50%), Gaps = 8/167 (4%)
Frame = -1
Query: 502 RPYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLRXXXXXXXXPGSYVGEVVNVM 323
R LQH EL+ +VR NL + + N+ ++ L+ G +GEV+ +
Sbjct: 19 RKKLLQH-KELESRVRTARENLRGAKKEFNKTEDDLKSLQSV-------GQIIGEVLRPL 70
Query: 322 GKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLVLPSKVDPLVNLMKV 143
+++VK +YVV TRV L + + LP +VDP+V M
Sbjct: 71 DNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLH 130
Query: 142 EKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVL 2
E + +Y +GGL QI+E++E IELP+ +PELF +GI PKGVL
Sbjct: 131 EDPGNISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVL 177
>TAIR9_protein||AT2G20140.1 | Symbols: | 26S protease regulatory complex
subunit 4, putative | chr2:8692736-8694837 FORWARD
Length = 444
Score = 87 bits (214), Expect = 9e-018
Identities = 44/115 (38%), Positives = 66/115 (57%)
Frame = -1
Query: 346 VGEVVNVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLVLPSKVD 167
VG + ++ +N +V +Y V P + + N + +L +VD
Sbjct: 112 VGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCSILMHNKVLSVVGILQDEVD 171
Query: 166 PLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVL 2
P+V++MKVEK P +Y IGGL+ QI+EIKE +ELP+ HPEL+E +GI PKGV+
Sbjct: 172 PMVSVMKVEKAPLESYADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGVI 226
>TAIR9_protein||AT4G29040.1 | Symbols: RPT2a | RPT2a (regulatory particle
AAA-ATPase 2a); ATPase | chr4:14312369-14314386 FORWARD
Length = 444
Score = 87 bits (214), Expect = 9e-018
Identities = 44/115 (38%), Positives = 66/115 (57%)
Frame = -1
Query: 346 VGEVVNVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLVLPSKVD 167
VG + ++ +N +V +Y V P + + N + +L +VD
Sbjct: 112 VGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCSILMHNKVLSVVGILQDEVD 171
Query: 166 PLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVL 2
P+V++MKVEK P +Y IGGL+ QI+EIKE +ELP+ HPEL+E +GI PKGV+
Sbjct: 172 PMVSVMKVEKAPLESYADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGVI 226
>TAIR9_protein||AT1G53750.1 | Symbols: RPT1A | RPT1A (REGULATORY PARTICLE
TRIPLE-A 1A); ATPase | chr1:20065921-20068324 REVERSE
Length = 427
Score = 85 bits (209), Expect = 3e-017
Identities = 42/104 (40%), Positives = 61/104 (58%)
Frame = -1
Query: 313 KVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKV 134
K ++ V K+VV RV + + Y + + LP K+DP V +M VE+
Sbjct: 103 KYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEK 162
Query: 133 PDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVL 2
PD TY+ +GG +QI++++EV+ELP+ HPE F LGI PKGVL
Sbjct: 163 PDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVL 206
>TAIR9_protein||AT1G09100.1 | Symbols: RPT5B | RPT5B (26S proteasome AAA-ATPase
subunit RPT5B); ATPase/ calmodulin binding | chr1:2936675-2939258
REVERSE
Length = 424
Score = 74 bits (179), Expect = 1e-013
Identities = 37/78 (47%), Positives = 50/78 (64%)
Frame = -1
Query: 235 PSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPI 56
P V + DSY++ LPS+ D V M+V++ P Y+ IGGL++QI+E+ E I LP+
Sbjct: 131 PGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPM 190
Query: 55 KHPELFESLGIAQPKGVL 2
H E FE LGI PKGVL
Sbjct: 191 THKEQFEKLGIRPPKGVL 208
>TAIR9_protein||AT3G05530.1 | Symbols: RPT5A, ATS6A.2 | RPT5A (REGULATORY
PARTICLE TRIPLE-A ATPASE 5A); ATPase/ calmodulin binding |
chr3:1603540-1605993 FORWARD
Length = 425
Score = 73 bits (178), Expect = 1e-013
Identities = 36/78 (46%), Positives = 50/78 (64%)
Frame = -1
Query: 235 PSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPI 56
P V + DSY++ LPS+ D V M+V++ P Y+ IGGL++QI+E+ E I LP+
Sbjct: 132 PGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPM 191
Query: 55 KHPELFESLGIAQPKGVL 2
H E FE LG+ PKGVL
Sbjct: 192 THKERFEKLGVRPPKGVL 209
>TAIR9_protein||AT3G53230.1 | Symbols: | cell division cycle protein 48,
putative / CDC48, putative | chr3:19723416-19726489 FORWARD
Length = 816
Score = 49 bits (116), Expect = 2e-006
Identities = 20/48 (41%), Positives = 35/48 (72%)
Frame = -1
Query: 145 VEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVL 2
V +VP+ +++ IGGL+ +E++E ++ P++HPE FE G++ KGVL
Sbjct: 472 VVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVL 519
>TAIR9_protein||AT5G03340.1 | Symbols: | cell division cycle protein 48,
putative / CDC48, putative | chr5:810091-813133 REVERSE
Length = 811
Score = 49 bits (116), Expect = 2e-006
Identities = 20/48 (41%), Positives = 35/48 (72%)
Frame = -1
Query: 145 VEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVL 2
V +VP+ +++ IGGL+ +E++E ++ P++HPE FE G++ KGVL
Sbjct: 471 VVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVL 518
>TAIR9_protein||AT3G09840.1 | Symbols: CDC48, ATCDC48, CDC48A | CDC48 (CELL
DIVISION CYCLE 48); ATPase/ identical protein binding |
chr3:3019494-3022832 FORWARD
Length = 810
Score = 49 bits (115), Expect = 3e-006
Identities = 20/48 (41%), Positives = 35/48 (72%)
Frame = -1
Query: 145 VEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVL 2
V +VP+ +++ IGGL+ +E++E ++ P++HPE FE G++ KGVL
Sbjct: 471 VVEVPNVSWNDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVL 518
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 835,916,284
Number of Sequences: 33410
Number of Extensions: 835916284
Number of Successful Extensions: 46207245
Number of sequences better than 0.0: 0
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