BLASTX 7.6.2
Query= RU02834 /QuerySize=811
(810 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G14600.1 | Symbols: | FUNCTIONS IN: molecular... 130 1e-030
TAIR9_protein||AT1G29060.1 | Symbols: | FUNCTIONS IN: molecular... 129 3e-030
>TAIR9_protein||AT4G14600.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: Target SNARE coiled-coil
region (InterPro:IPR000727); BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G29060.1); Has 95 Blast hits to 95
proteins in 38 species: Archae - 0; Bacteria - 0; Metazoa - 27; Fungi -
19; Plants - 44; Viruses - 0; Other Eukaryotes - 5 (source: NCBI
BLink). | chr4:8376562-8378078 FORWARD
Length = 138
Score = 130 bits (325), Expect = 1e-030
Identities = 59/103 (57%), Positives = 82/103 (79%)
Frame = -1
Query: 639 THRRVNPDEIQLRIDPIHADVDEEITGLRSQVRRLRNVAQEIEVEAKSQNAMLNQLDMTV 460
T +EIQLRIDP+H+D+D+EITGL QVR+L+N+AQEI EAK Q L++L MT+
Sbjct: 29 TRNAAGSEEIQLRIDPMHSDLDDEITGLHGQVRQLKNIAQEIGSEAKFQRDFLDELQMTL 88
Query: 459 MKAQAWLKNNVRRLNKSTIQSGSNHVVHVVCFALICFFLVYFW 331
++AQA +KNN+R+LN S I+SG+NH++HVV FAL+ FF++Y W
Sbjct: 89 IRAQAGVKNNIRKLNMSIIRSGNNHIMHVVLFALLVFFVLYIW 131
>TAIR9_protein||AT1G29060.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24
plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro
DOMAIN/s: Target SNARE coiled-coil region (InterPro:IPR000727); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT4G14600.1); Has 95 Blast hits to 95 proteins in 34 species:
Archae - 0; Bacteria - 0; Metazoa - 28; Fungi - 15; Plants - 47;
Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). |
chr1:10147857-10149459 FORWARD
Length = 135
Score = 129 bits (323), Expect = 3e-030
Identities = 59/103 (57%), Positives = 82/103 (79%)
Frame = -1
Query: 639 THRRVNPDEIQLRIDPIHADVDEEITGLRSQVRRLRNVAQEIEVEAKSQNAMLNQLDMTV 460
T +EIQLRIDP+H+D+D+EI GL QVR+L+N+AQEI EAKSQ L++L MT+
Sbjct: 26 TRNASGSEEIQLRIDPMHSDLDDEILGLHGQVRQLKNIAQEIGSEAKSQRDFLDELQMTL 85
Query: 459 MKAQAWLKNNVRRLNKSTIQSGSNHVVHVVCFALICFFLVYFW 331
++AQA +KNN+R+LN S I+SG+NH++HVV FAL+ FF++Y W
Sbjct: 86 IRAQAGVKNNIRKLNLSIIRSGNNHIMHVVLFALLLFFILYMW 128
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 835,916,284
Number of Sequences: 33410
Number of Extensions: 835916284
Number of Successful Extensions: 46207245
Number of sequences better than 0.0: 0
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