BLASTX 7.6.2
Query= RU02851 /QuerySize=1213
(1212 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G57660.1 | Symbols: ATCOL5, COL5 | zinc finger... 257 1e-068
TAIR9_protein||AT5G24930.1 | Symbols: ATCOL4, COL4 | zinc finger... 231 6e-061
TAIR9_protein||AT2G24790.2 | Symbols: COL3, ATCOL3 | COL3 (CONST... 187 1e-047
TAIR9_protein||AT2G24790.1 | Symbols: COL3, ATCOL3 | COL3 (CONST... 187 1e-047
TAIR9_protein||AT5G15850.1 | Symbols: COL1, ATCOL1 | COL1 (const... 173 3e-043
TAIR9_protein||AT5G15840.1 | Symbols: CO, FG | CO (CONSTANS); tr... 153 3e-037
TAIR9_protein||AT5G15840.2 | Symbols: CO, FG | CO (CONSTANS); tr... 153 3e-037
TAIR9_protein||AT3G02380.1 | Symbols: COL2 | COL2 (constans-like... 141 1e-033
TAIR9_protein||AT2G33500.1 | Symbols: | zinc finger (B-box type... 87 2e-017
TAIR9_protein||AT2G33500.2 | Symbols: | zinc finger (B-box type... 87 2e-017
TAIR9_protein||AT2G47890.2 | Symbols: | zinc finger (B-box type... 86 4e-017
TAIR9_protein||AT2G47890.1 | Symbols: | zinc finger (B-box type... 86 4e-017
TAIR9_protein||AT1G28050.1 | Symbols: | zinc finger (B-box type... 86 6e-017
TAIR9_protein||AT1G73870.1 | Symbols: | zinc finger (B-box type... 67 2e-011
TAIR9_protein||AT2G21320.1 | Symbols: | zinc finger (B-box type... 66 5e-011
TAIR9_protein||AT1G49130.1 | Symbols: | zinc finger (B-box type... 65 8e-011
TAIR9_protein||AT1G49130.2 | Symbols: | zinc finger (B-box type... 65 8e-011
TAIR9_protein||AT4G38960.1 | Symbols: | zinc finger (B-box type... 65 1e-010
TAIR9_protein||AT2G31380.1 | Symbols: STH | STH; protein domain ... 64 2e-010
TAIR9_protein||AT1G25440.1 | Symbols: | zinc finger (B-box type... 63 4e-010
TAIR9_protein||AT1G63820.1 | Symbols: | INVOLVED IN: biological... 62 5e-010
TAIR9_protein||AT1G06040.2 | Symbols: STO | STO (SALT TOLERANCE)... 62 7e-010
TAIR9_protein||AT1G06040.1 | Symbols: STO | STO (SALT TOLERANCE)... 62 7e-010
TAIR9_protein||AT5G14370.1 | Symbols: | LOCATED IN: chloroplast... 62 7e-010
TAIR9_protein||AT3G07650.1 | Symbols: COL9 | COL9 (CONSTANS-LIKE... 62 9e-010
>TAIR9_protein||AT5G57660.1 | Symbols: ATCOL5, COL5 | zinc finger (B-box type)
family protein | chr5:23355573-23356729 FORWARD
Length = 356
Score = 257 bits (656), Expect = 1e-068
Identities = 158/359 (44%), Positives = 199/359 (55%), Gaps = 49/359 (13%)
Frame = +1
Query: 40 ASKLCDSCKSATATLFCRADSAFLCVNCDTKIHAANKLASRHARVWLCEVCEQAPAHVTC 219
A++ CD+CKS TA +FCR DSAFLC+ CDT+IH+ +RH RVW+CEVCEQAPA VTC
Sbjct: 18 AARSCDACKSVTAAVFCRVDSAFLCIACDTRIHS----FTRHERVWVCEVCEQAPAAVTC 73
Query: 220 KADDATLCVTCDREIHSANPLSRRHERVPVAPFYDSLNSDDSTAVKSDAAVNFLDDRYLS 399
KAD A LCV+CD +IHSANPL+ RHERVPV F+DS ++ K A+ F S
Sbjct: 74 KADAAALCVSCDADIHSANPLASRHERVPVETFFDSA---ETAVAKISASSTF--GILGS 128
Query: 400 DGDGDGETTEVSREEAEAASWLLPNPKDLN--------------SGQYVFSDMDPYLDLD 537
D V ++ WLLPN D N S ++FSD D +D +
Sbjct: 129 STTVDLTAVPVMADDLGLCPWLLPN--DFNEPAKIEIGTENMKGSSDFMFSDFDRLIDFE 186
Query: 538 YGGVDPKAQTQEEQNSSGTDGVVPVQSKTV------QPQTFEMELPGSKPFIYGYHGHCL 699
+ QN++G D +VPVQ+KT F+++ SK + Y +
Sbjct: 187 FPN-----SFNHHQNNAGGDSLVPVQTKTEPLPLTNNDHCFDIDFCRSKLSAFTYPSQSV 241
Query: 700 XXXXXXXXXXXXXXXPDGNMLTEMSDPYPKSIGDQLSHPAVQISSADREARVLRYREKRK 879
PDGN ++ +I + Q SS DREARVLRYREKRK
Sbjct: 242 -SHSVSTSSIEYGVVPDGNTNNSVN---RSTITSSTTGGDHQASSMDREARVLRYREKRK 297
Query: 880 NRKFEKTIRYASRKAYAETRPRIKGRFAKRTEAEIE---------AERLCRYGVVPSF* 1029
NRKFEKTIRYASRKAYAE+RPRIKGRFAKRTE E + + +YGVVP+F*
Sbjct: 298 NRKFEKTIRYASRKAYAESRPRIKGRFAKRTETENDDIFLSHVYASAAHAQYGVVPTF* 356
>TAIR9_protein||AT5G24930.1 | Symbols: ATCOL4, COL4 | zinc finger (B-box type)
family protein | chr5:8589325-8590949 FORWARD
Length = 407
Score = 231 bits (589), Expect = 6e-061
Identities = 121/206 (58%), Positives = 144/206 (69%), Gaps = 9/206 (4%)
Frame = +1
Query: 37 MASKLCDSCKSATATLFCRADSAFLCVNCDTKIHAANKLASRHARVWLCEVCEQAPAHVT 216
MASKLCDSCKSATA L+CR D+AFLC++CD+K+HAANKLASRHARVW+CEVCEQAPAHVT
Sbjct: 45 MASKLCDSCKSATAALYCRPDAAFLCLSCDSKVHAANKLASRHARVWMCEVCEQAPAHVT 104
Query: 217 CKADDATLCVTCDREIHSANPLSRRHERVPVAPFYDSLNSDDSTAVKSDAAVNFLDDRYL 396
CKAD A LCVTCDR+IHSANPL+RRHERVPV PFYDS++SD S AVNFLDD Y
Sbjct: 105 CKADAAALCVTCDRDIHSANPLARRHERVPVTPFYDSVSSDGSV---KHTAVNFLDDCYF 161
Query: 397 SDGDGDGETTEVSREEAEAASW-LLPNPKDLNSGQYVFSDMDPYLDLDYGGVDPKAQTQE 573
SD DG+G E EE EAASW LLPNPK + + ++ G P+ T +
Sbjct: 162 SDIDGNGSREE---EEEEAASWLLLPNPKTTTTATAGIVAVTSAEEVP--GDSPEMNTGQ 216
Query: 574 EQNSSGTDGVVPVQSKTVQPQTFEME 651
+ S D + + V P+ +E
Sbjct: 217 QYLFSDPDPYLDLDYGNVDPKVESLE 242
Score = 176 bits (445), Expect = 3e-044
Identities = 105/199 (52%), Positives = 133/199 (66%), Gaps = 18/199 (9%)
Frame = +1
Query: 481 DLNSG-QYVFSDMDPYLDLDYGGVDPKAQTQEEQNSSGTDGVVPVQSKTVQPQT-----F 642
++N+G QY+FSD DPYLDLDYG VDPK ++ EQNSSGTDGVVPV+++TV+ T F
Sbjct: 211 EMNTGQQYLFSDPDPYLDLDYGNVDPKVESL-EQNSSGTDGVVPVENRTVRIPTVNENCF 269
Query: 643 EMELP-GSKPFIYGYHGHCLXXXXXXXXXXXXXXXPDGNMLTEMSDPY--PKSIG-DQLS 810
EM+ GSK F YG +C+ PDG + ++S PY P + G D +
Sbjct: 270 EMDFTGGSKGFTYGGGYNCI-SHSVSSSSMEVGVVPDGGSVADVSYPYGGPATSGADPGT 328
Query: 811 HPAVQISSADREARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRTEAEIEA 990
AV ++SA+REARV+RYREKRKNRKFEKTIRYASRKAYAE RPRIKGRFAKRT+
Sbjct: 329 QRAVPLTSAEREARVMRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTDTNESN 388
Query: 991 ERL------CRYGVVPSF* 1029
+ + +G+VP+F*
Sbjct: 389 DVVGHGGIFSGFGLVPTF* 407
>TAIR9_protein||AT2G24790.2 | Symbols: COL3, ATCOL3 | COL3 (CONSTANS-LIKE 3);
protein binding / transcription factor/ zinc ion binding |
chr2:10566959-10567621 FORWARD
Length = 221
Score = 187 bits (474), Expect = 1e-047
Identities = 86/119 (72%), Positives = 100/119 (84%), Gaps = 4/119 (3%)
Frame = +1
Query: 31 IAMASKLCDSCKSATATLFCRADSAFLCVNCDTKIHAANKLASRHARVWLCEVCEQAPAH 210
+A +S+LCDSCKS ATLFCRAD+AFLC +CD KIH ANKLASRH RVWLCEVCEQAPAH
Sbjct: 1 MASSSRLCDSCKSTAATLFCRADAAFLCGDCDGKIHTANKLASRHERVWLCEVCEQAPAH 60
Query: 211 VTCKADDATLCVTCDREIHSANPLSRRHERVPVAPFYDSLNSDDSTAVKSDAAVNFLDD 387
VTCKAD A LCVTCDR+IHSANPLSRRHERVP+ PFYD++ A + ++VNF+D+
Sbjct: 61 VTCKADAAALCVTCDRDIHSANPLSRRHERVPITPFYDAV----GPAKSASSSVNFVDE 115
>TAIR9_protein||AT2G24790.1 | Symbols: COL3, ATCOL3 | COL3 (CONSTANS-LIKE 3);
protein binding / transcription factor/ zinc ion binding |
chr2:10566959-10567946 FORWARD
Length = 295
Score = 187 bits (474), Expect = 1e-047
Identities = 86/119 (72%), Positives = 100/119 (84%), Gaps = 4/119 (3%)
Frame = +1
Query: 31 IAMASKLCDSCKSATATLFCRADSAFLCVNCDTKIHAANKLASRHARVWLCEVCEQAPAH 210
+A +S+LCDSCKS ATLFCRAD+AFLC +CD KIH ANKLASRH RVWLCEVCEQAPAH
Sbjct: 1 MASSSRLCDSCKSTAATLFCRADAAFLCGDCDGKIHTANKLASRHERVWLCEVCEQAPAH 60
Query: 211 VTCKADDATLCVTCDREIHSANPLSRRHERVPVAPFYDSLNSDDSTAVKSDAAVNFLDD 387
VTCKAD A LCVTCDR+IHSANPLSRRHERVP+ PFYD++ A + ++VNF+D+
Sbjct: 61 VTCKADAAALCVTCDRDIHSANPLSRRHERVPITPFYDAV----GPAKSASSSVNFVDE 115
Score = 104 bits (258), Expect = 2e-022
Identities = 55/76 (72%), Positives = 61/76 (80%), Gaps = 4/76 (5%)
Frame = +1
Query: 814 PAVQISSADREARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRTEAEI--- 984
PAVQ+S A+REARVLRYREKRKNRKFEKTIRYASRKAYAE RPRIKGRFAKRT++
Sbjct: 220 PAVQLSPAEREARVLRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTDSRENDG 279
Query: 985 -EAERLCRYGVVPSF* 1029
+ +GVVPSF*
Sbjct: 280 GDVGVYGGFGVVPSF* 295
>TAIR9_protein||AT5G15850.1 | Symbols: COL1, ATCOL1 | COL1 (constans-like 1);
transcription factor/ zinc ion binding | chr5:5176297-5177473 REVERSE
Length = 356
Score = 173 bits (437), Expect = 3e-043
Identities = 92/201 (45%), Positives = 124/201 (61%), Gaps = 16/201 (7%)
Frame = +1
Query: 43 SKLCDSCKSATATLFCRADSAFLCVNCDTKIHAANKLASRHARVWLCEVCEQAPAHVTCK 222
++ CD+C+SA T++CRADSA+LC +CD ++HAAN+LASRH RV +C+ CE+APA CK
Sbjct: 9 AQACDTCRSAACTVYCRADSAYLCSSCDAQVHAANRLASRHERVRVCQSCERAPAAFFCK 68
Query: 223 ADDATLCVTCDREIHSANPLSRRHERVPVAPFYDSLNSDDSTAVKSDAAVNFLDDRYLSD 402
AD A+LC TCD EIHSANPL+RRH+RVP+ P + S +T + V ++R +
Sbjct: 69 ADAASLCTTCDSEIHSANPLARRHQRVPILPISEYSYSSTATNHSCETTVTDPENRLVLG 128
Query: 403 GDGDGETTEVSREEAEAASWLLPNPKDLNSGQYVFSDMDPYLDL-DYGGVDPKAQTQEE- 576
+ + E +EAEAASWLLPN + FS D +L+L DY D + Q
Sbjct: 129 QEEEDE------DEAEAASWLLPNSGKNSGNNNGFSIGDEFLNLVDYSSSDKQFTDQSNQ 182
Query: 577 --------QNSSGTDGVVPVQ 615
Q S G DGVVP+Q
Sbjct: 183 YQLDCNVPQRSYGEDGVVPLQ 203
Score = 109 bits (270), Expect = 6e-024
Identities = 78/204 (38%), Positives = 99/204 (48%), Gaps = 30/204 (14%)
Frame = +1
Query: 472 NPKDLNSGQYVFSDMDPYLDLDYGGVDPKAQTQEEQNSSGTDGVVPVQSKT-----VQPQ 636
N D +S F+D LD Q S G DGVVP+Q + + Q
Sbjct: 165 NLVDYSSSDKQFTDQSNQYQLD---------CNVPQRSYGEDGVVPLQIEVSKGMYQEQQ 215
Query: 637 TFEMELP----GSKPFIYGYHGHCLXXXXXXXXXXXXXXXPDGNMLTEMSDPYPKSIGDQ 804
F++ + G+ G H + D + S PK++ DQ
Sbjct: 216 NFQLSINCGSWGALRSSNGSLSHMVNVSSMDLGVVPESTTSDATVSNPRS---PKAVTDQ 272
Query: 805 LSHPAVQ-ISSADREARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRTEAE 981
+P Q +S DREARVLRYREK+K RKFEKTIRYASRKAYAE RPRIKGRFAK+ + +
Sbjct: 273 PPYPPAQMLSPRDREARVLRYREKKKMRKFEKTIRYASRKAYAEKRPRIKGRFAKKKDVD 332
Query: 982 IEAERL--------CRYGVVPSF* 1029
EA + YG+VPSF*
Sbjct: 333 EEANQAFSTMITFDTGYGIVPSF* 356
>TAIR9_protein||AT5G15840.1 | Symbols: CO, FG | CO (CONSTANS); transcription
factor/ transcription regulator/ zinc ion binding |
chr5:5171343-5172697 REVERSE
Length = 374
Score = 153 bits (385), Expect = 3e-037
Identities = 84/188 (44%), Positives = 121/188 (64%), Gaps = 14/188 (7%)
Frame = +1
Query: 52 CDSCKSATATLFCRADSAFLCVNCDTKIHAANKLASRHARVWLCEVCEQAPAHVTCKADD 231
CD+C+S T++C ADSA+LC++CD ++H+AN++ASRH RV +CE CE+APA C+ADD
Sbjct: 20 CDTCRSNACTVYCHADSAYLCMSCDAQVHSANRVASRHKRVRVCESCERAPAAFLCEADD 79
Query: 232 ATLCVTCDREIHSANPLSRRHERVPVAPFY-DSLNSDDSTAVKSDAAVNFLDDRYLSDGD 408
A+LC CD E+HSANPL+RRH+RVP+ P +S +S +T +S+ + + R + D +
Sbjct: 80 ASLCTACDSEVHSANPLARRHQRVPILPISGNSFSSMTTTHHQSEKTMTDPEKRLVVDQE 139
Query: 409 GDGETTEVSREEAEAASWLLPNPKDLNSGQ---YVFSDMDPYLDL-DY-GGVDPK---AQ 564
E E ++ E ASWL PN N+ Q +FS D YL+L DY +D K
Sbjct: 140 ---EGEEGDKDAKEVASWLFPNSDKNNNNQNNGLLFS--DEYLNLVDYNSSMDYKFTGEY 194
Query: 565 TQEEQNSS 588
+Q +QN S
Sbjct: 195 SQHQQNCS 202
Score = 97 bits (241), Expect = 1e-020
Identities = 58/97 (59%), Positives = 62/97 (63%), Gaps = 18/97 (18%)
Frame = +1
Query: 784 PKSIGDQLSHPA------VQISSADREARVLRYREKRKNRKFEKTIRYASRKAYAETRPR 945
PK +Q PA Q+S DREARVLRYREKRK RKFEKTIRYASRKAYAE RPR
Sbjct: 281 PKGTVEQQPDPASQMITVTQLSPMDREARVLRYREKRKTRKFEKTIRYASRKAYAEIRPR 340
Query: 946 IKGRFAKRTEAEIEAERL---------CRYGVVPSF* 1029
+ GRFAKR EIEAE YG+VPSF*
Sbjct: 341 VNGRFAKR---EIEAEEQGFNTMLMYNTGYGIVPSF* 374
>TAIR9_protein||AT5G15840.2 | Symbols: CO, FG | CO (CONSTANS); transcription
factor/ transcription regulator/ zinc ion binding |
chr5:5171873-5172697 REVERSE
Length = 275
Score = 153 bits (385), Expect = 3e-037
Identities = 84/188 (44%), Positives = 121/188 (64%), Gaps = 14/188 (7%)
Frame = +1
Query: 52 CDSCKSATATLFCRADSAFLCVNCDTKIHAANKLASRHARVWLCEVCEQAPAHVTCKADD 231
CD+C+S T++C ADSA+LC++CD ++H+AN++ASRH RV +CE CE+APA C+ADD
Sbjct: 20 CDTCRSNACTVYCHADSAYLCMSCDAQVHSANRVASRHKRVRVCESCERAPAAFLCEADD 79
Query: 232 ATLCVTCDREIHSANPLSRRHERVPVAPFY-DSLNSDDSTAVKSDAAVNFLDDRYLSDGD 408
A+LC CD E+HSANPL+RRH+RVP+ P +S +S +T +S+ + + R + D +
Sbjct: 80 ASLCTACDSEVHSANPLARRHQRVPILPISGNSFSSMTTTHHQSEKTMTDPEKRLVVDQE 139
Query: 409 GDGETTEVSREEAEAASWLLPNPKDLNSGQ---YVFSDMDPYLDL-DY-GGVDPK---AQ 564
E E ++ E ASWL PN N+ Q +FS D YL+L DY +D K
Sbjct: 140 ---EGEEGDKDAKEVASWLFPNSDKNNNNQNNGLLFS--DEYLNLVDYNSSMDYKFTGEY 194
Query: 565 TQEEQNSS 588
+Q +QN S
Sbjct: 195 SQHQQNCS 202
>TAIR9_protein||AT3G02380.1 | Symbols: COL2 | COL2 (constans-like 2);
transcription factor/ zinc ion binding | chr3:487438-488624 REVERSE
Length = 348
Score = 141 bits (354), Expect = 1e-033
Identities = 65/116 (56%), Positives = 82/116 (70%), Gaps = 2/116 (1%)
Frame = +1
Query: 43 SKLCDSCKSATATLFCRADSAFLCVNCDTKIHAANKLASRHARVWLCEVCEQAPAHVTCK 222
++ CD+C+SA T++C ADSA+LC CD ++HAAN++ASRH RV +C+ CE APA CK
Sbjct: 13 ARACDTCRSAACTVYCEADSAYLCTTCDARVHAANRVASRHERVRVCQSCESAPAAFLCK 72
Query: 223 ADDATLCVTCDREIHSANPLSRRHERVPVAPFYDSLNSDDSTAVKSDAAVNFLDDR 390
AD A+LC CD EIHSANPL+RRH+RVP+ P S NS S A A N DDR
Sbjct: 73 ADAASLCTACDAEIHSANPLARRHQRVPILPL--SANSCSSMAPSETDADNDEDDR 126
Score = 97 bits (240), Expect = 2e-020
Identities = 50/71 (70%), Positives = 56/71 (78%), Gaps = 4/71 (5%)
Frame = +1
Query: 799 DQLSHPAVQI----SSADREARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAK 966
DQLS P Q+ + +REARVLRYREK+K RKF+KTIRYASRKAYAE RPRIKGRFAK
Sbjct: 260 DQLSGPPTQVVQQLTPMEREARVLRYREKKKTRKFDKTIRYASRKAYAEIRPRIKGRFAK 319
Query: 967 RTEAEIEAERL 999
R E E EAE +
Sbjct: 320 RIETEAEAEEI 330
>TAIR9_protein||AT2G33500.1 | Symbols: | zinc finger (B-box type) family
protein | chr2:14188159-14190046 REVERSE
Length = 403
Score = 87 bits (214), Expect = 2e-017
Identities = 38/89 (42%), Positives = 52/89 (58%)
Frame = +1
Query: 52 CDSCKSATATLFCRADSAFLCVNCDTKIHAANKLASRHARVWLCEVCEQAPAHVTCKADD 231
C+ C TA LFCRAD+A LC+ CD +H+AN L+ +H R +C+ C + P V C D+
Sbjct: 12 CEFCGERTAVLFCRADTAKLCLPCDQHVHSANLLSRKHVRSQICDNCSKEPVSVRCFTDN 71
Query: 232 ATLCVTCDREIHSANPLSRRHERVPVAPF 318
LC CD ++H + S HER V F
Sbjct: 72 LVLCQECDWDVHGSCSSSATHERSAVEGF 100
>TAIR9_protein||AT2G33500.2 | Symbols: | zinc finger (B-box type) family
protein | chr2:14188159-14190046 REVERSE
Length = 402
Score = 87 bits (214), Expect = 2e-017
Identities = 38/89 (42%), Positives = 52/89 (58%)
Frame = +1
Query: 52 CDSCKSATATLFCRADSAFLCVNCDTKIHAANKLASRHARVWLCEVCEQAPAHVTCKADD 231
C+ C TA LFCRAD+A LC+ CD +H+AN L+ +H R +C+ C + P V C D+
Sbjct: 12 CEFCGERTAVLFCRADTAKLCLPCDQHVHSANLLSRKHVRSQICDNCSKEPVSVRCFTDN 71
Query: 232 ATLCVTCDREIHSANPLSRRHERVPVAPF 318
LC CD ++H + S HER V F
Sbjct: 72 LVLCQECDWDVHGSCSSSATHERSAVEGF 100
>TAIR9_protein||AT2G47890.2 | Symbols: | zinc finger (B-box type) family
protein | chr2:19608245-19609036 FORWARD
Length = 238
Score = 86 bits (211), Expect = 4e-017
Identities = 37/91 (40%), Positives = 59/91 (64%), Gaps = 2/91 (2%)
Frame = +1
Query: 46 KLCDSCKSATATLFCRADSAFLCVNCDTKIHAANKLASRHARVWLCEVCEQAPAHVTCKA 225
+LCD C S+ A ++C+ADSA LC+ CD ++H AN+L ++H R LC+ C ++P+ + C+
Sbjct: 11 RLCDYCDSSVALVYCKADSAKLCLACDKQVHVANQLFAKHFRSLLCDSCNESPSSLFCET 70
Query: 226 DDATLCVTCDREIHSANPLSRRHERVPVAPF 318
+ + LC CD + H+A+ S H R P F
Sbjct: 71 ERSVLCQNCDWQHHTAS--SSLHSRRPFEGF 99
>TAIR9_protein||AT2G47890.1 | Symbols: | zinc finger (B-box type) family
protein | chr2:19608245-19609476 FORWARD
Length = 333
Score = 86 bits (211), Expect = 4e-017
Identities = 37/91 (40%), Positives = 59/91 (64%), Gaps = 2/91 (2%)
Frame = +1
Query: 46 KLCDSCKSATATLFCRADSAFLCVNCDTKIHAANKLASRHARVWLCEVCEQAPAHVTCKA 225
+LCD C S+ A ++C+ADSA LC+ CD ++H AN+L ++H R LC+ C ++P+ + C+
Sbjct: 11 RLCDYCDSSVALVYCKADSAKLCLACDKQVHVANQLFAKHFRSLLCDSCNESPSSLFCET 70
Query: 226 DDATLCVTCDREIHSANPLSRRHERVPVAPF 318
+ + LC CD + H+A+ S H R P F
Sbjct: 71 ERSVLCQNCDWQHHTAS--SSLHSRRPFEGF 99
>TAIR9_protein||AT1G28050.1 | Symbols: | zinc finger (B-box type) family
protein | chr1:9775768-9777657 REVERSE
Length = 434
Score = 86 bits (210), Expect = 6e-017
Identities = 38/89 (42%), Positives = 51/89 (57%)
Frame = +1
Query: 52 CDSCKSATATLFCRADSAFLCVNCDTKIHAANKLASRHARVWLCEVCEQAPAHVTCKADD 231
CD C TA LFCRAD+A LC+ CD ++H AN L+ +H R +C+ C P V C D+
Sbjct: 9 CDFCGERTAVLFCRADTAKLCLPCDQQVHTANLLSRKHVRSQICDNCGNEPVSVRCFTDN 68
Query: 232 ATLCVTCDREIHSANPLSRRHERVPVAPF 318
LC CD ++H + +S H R V F
Sbjct: 69 LILCQECDWDVHGSCSVSDAHVRSAVEGF 97
>TAIR9_protein||AT1G73870.1 | Symbols: | zinc finger (B-box type) family
protein | chr1:27779214-27780522 FORWARD
Length = 393
Score = 67 bits (163), Expect = 2e-011
Identities = 33/48 (68%), Positives = 36/48 (75%)
Frame = +1
Query: 829 SSADREARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRT 972
S +REARVLRY+EKR+ R F K IRY RK AE RPRIKGRF KRT
Sbjct: 341 SDGEREARVLRYKEKRRTRLFSKKIRYEVRKLNAEQRPRIKGRFVKRT 388
>TAIR9_protein||AT2G21320.1 | Symbols: | zinc finger (B-box type) family
protein | chr2:9126502-9127652 FORWARD
Length = 173
Score = 66 bits (159), Expect = 5e-011
Identities = 31/58 (53%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Frame = +1
Query: 49 LCDSCKSATATLFCRADSAFLCVNCDTKIHAANKLASRHARVWLCEVCEQAPAHVTCK 222
LCD+C+SA A +FC AD A LC +CD K+H NKLASRH RV L + AP+ C+
Sbjct: 4 LCDACESAAAIVFCAADEAALCCSCDEKVHKCNKLASRHLRVGLADP-SNAPSCDICE 60
>TAIR9_protein||AT1G49130.1 | Symbols: | zinc finger (B-box type) family
protein | chr1:18174741-18175936 REVERSE
Length = 327
Score = 65 bits (157), Expect = 8e-011
Identities = 31/48 (64%), Positives = 38/48 (79%)
Frame = +1
Query: 835 ADREARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRTEA 978
++REARV RYR+KRKNR FEK IRY RK A+ RPR+KGRF +R+ A
Sbjct: 276 SEREARVWRYRDKRKNRLFEKKIRYEVRKVNADKRPRMKGRFVRRSLA 323
>TAIR9_protein||AT1G49130.2 | Symbols: | zinc finger (B-box type) family
protein | chr1:18174741-18175811 REVERSE
Length = 320
Score = 65 bits (157), Expect = 8e-011
Identities = 31/48 (64%), Positives = 38/48 (79%)
Frame = +1
Query: 835 ADREARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRTEA 978
++REARV RYR+KRKNR FEK IRY RK A+ RPR+KGRF +R+ A
Sbjct: 269 SEREARVWRYRDKRKNRLFEKKIRYEVRKVNADKRPRMKGRFVRRSLA 316
>TAIR9_protein||AT4G38960.1 | Symbols: | zinc finger (B-box type) family
protein | chr4:18161576-18163045 FORWARD
Length = 184
Score = 65 bits (156), Expect = 1e-010
Identities = 30/57 (52%), Positives = 37/57 (64%), Gaps = 5/57 (8%)
Frame = +1
Query: 49 LCDSCKSATATLFCRADSAFLCVNCDTKIHAANKLASRHARVWLCEVCEQAPAHVTC 219
LCD+C++A A +FC AD A LC CD K+H NKLASRH RV L E P++ C
Sbjct: 4 LCDACENAAAIIFCAADEAALCRPCDEKVHMCNKLASRHVRVGLAE-----PSNAPC 55
>TAIR9_protein||AT2G31380.1 | Symbols: STH | STH; protein domain specific
binding / transcription factor/ zinc ion binding |
chr2:13382150-13383302 FORWARD
Length = 239
Score = 64 bits (154), Expect = 2e-010
Identities = 31/71 (43%), Positives = 41/71 (57%)
Frame = +1
Query: 52 CDSCKSATATLFCRADSAFLCVNCDTKIHAANKLASRHARVWLCEVCEQAPAHVTCKADD 231
CD C+ A ATL C AD A LC CD ++HAANKLAS+H R++L + + P C
Sbjct: 5 CDVCEKAPATLICCADEAALCAKCDVEVHAANKLASKHQRLFLDSLSTKFPPCDICLEKA 64
Query: 232 ATLCVTCDREI 264
A + DR +
Sbjct: 65 AFIFCVEDRAL 75
>TAIR9_protein||AT1G25440.1 | Symbols: | zinc finger (B-box type) family
protein | chr1:8933939-8935284 REVERSE
Length = 418
Score = 63 bits (151), Expect = 4e-010
Identities = 33/62 (53%), Positives = 36/62 (58%)
Frame = +1
Query: 814 PAVQISSADREARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRTEAEIEAE 993
P+ REARV RYREKR+ R F K IRY RK AE RPR+KGRF KR A
Sbjct: 352 PSSGFGDGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRASLAAAAS 411
Query: 994 RL 999
L
Sbjct: 412 PL 413
>TAIR9_protein||AT1G63820.1 | Symbols: | INVOLVED IN: biological_process
unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: flower,
root; EXPRESSED DURING: petal differentiation and expansion stage;
CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G41380.1); Has 907 Blast hits to 907 proteins in 64 species:
Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 882; Viruses
- 0; Other Eukaryotes - 24 (source: NCBI BLink). |
chr1:23682529-23684050 REVERSE
Length = 294
Score = 62 bits (150), Expect = 5e-010
Identities = 31/72 (43%), Positives = 43/72 (59%)
Frame = +1
Query: 760 LTEMSDPYPKSIGDQLSHPAVQISSADREARVLRYREKRKNRKFEKTIRYASRKAYAETR 939
L S P GD+ S + SS +R+ ++ +YR KR R F KTI+YA RK A+ R
Sbjct: 165 LAAESSPTTVFSGDEQSLRVGRYSSEERKEKISKYRAKRTQRNFTKTIKYACRKTLADNR 224
Query: 940 PRIKGRFAKRTE 975
PR++GRFA+ E
Sbjct: 225 PRVRGRFARNDE 236
>TAIR9_protein||AT1G06040.2 | Symbols: STO | STO (SALT TOLERANCE); DNA binding /
protein binding / transcription factor/ zinc ion binding |
chr1:1828957-1829659 REVERSE
Length = 178
Score = 62 bits (149), Expect = 7e-010
Identities = 31/71 (43%), Positives = 41/71 (57%)
Frame = +1
Query: 52 CDSCKSATATLFCRADSAFLCVNCDTKIHAANKLASRHARVWLCEVCEQAPAHVTCKADD 231
CD C+ A AT+ C AD A LC CD +IHAANKLAS+H R+ L + + P C+
Sbjct: 5 CDVCEKAPATVICCADEAALCPQCDIEIHAANKLASKHQRLHLNSLSTKFPRCDICQEKA 64
Query: 232 ATLCVTCDREI 264
A + DR +
Sbjct: 65 AFIFCVEDRAL 75
>TAIR9_protein||AT1G06040.1 | Symbols: STO | STO (SALT TOLERANCE); DNA binding /
protein binding / transcription factor/ zinc ion binding |
chr1:1828662-1829659 REVERSE
Length = 249
Score = 62 bits (149), Expect = 7e-010
Identities = 31/71 (43%), Positives = 41/71 (57%)
Frame = +1
Query: 52 CDSCKSATATLFCRADSAFLCVNCDTKIHAANKLASRHARVWLCEVCEQAPAHVTCKADD 231
CD C+ A AT+ C AD A LC CD +IHAANKLAS+H R+ L + + P C+
Sbjct: 5 CDVCEKAPATVICCADEAALCPQCDIEIHAANKLASKHQRLHLNSLSTKFPRCDICQEKA 64
Query: 232 ATLCVTCDREI 264
A + DR +
Sbjct: 65 AFIFCVEDRAL 75
>TAIR9_protein||AT5G14370.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:
21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: CCT domain (InterPro:IPR010402); BEST Arabidopsis
thaliana protein match is: CIL (TAIR:AT4G25990.1); Has 1815 Blast hits
to 1506 proteins in 139 species: Archae - 0; Bacteria - 8; Metazoa -
291; Fungi - 53; Plants - 1145; Viruses - 0; Other Eukaryotes - 318
(source: NCBI BLink). | chr5:4632147-4633651 REVERSE
Length = 340
Score = 62 bits (149), Expect = 7e-010
Identities = 29/46 (63%), Positives = 35/46 (76%)
Frame = +1
Query: 841 REARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRTEA 978
REA +LRY+EKR+NR F K IRY RK AE RPR+KGRF KR ++
Sbjct: 294 REASLLRYKEKRQNRLFSKRIRYQVRKLNAEKRPRVKGRFVKREDS 339
>TAIR9_protein||AT3G07650.1 | Symbols: COL9 | COL9 (CONSTANS-LIKE 9);
transcription factor/ zinc ion binding | chr3:2442494-2443901 FORWARD
Length = 373
Score = 62 bits (148), Expect = 9e-010
Identities = 34/68 (50%), Positives = 43/68 (63%), Gaps = 8/68 (11%)
Frame = +1
Query: 781 YPKSIGDQ--LSHPAVQISSADREARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKG 954
YP ++ D SH S R V+RY+EK+K RKF+K +RYASRKA A+ R R+KG
Sbjct: 299 YPPTLQDNNACSH------SVTRNNAVMRYKEKKKARKFDKRVRYASRKARADVRRRVKG 352
Query: 955 RFAKRTEA 978
RF K EA
Sbjct: 353 RFVKAGEA 360
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 835,916,284
Number of Sequences: 33410
Number of Extensions: 835916284
Number of Successful Extensions: 46207245
Number of sequences better than 0.0: 0
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