BLASTX 7.6.2
Query= RU03061 /QuerySize=788
(787 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G01150.1 | Symbols: | unknown protein | chr4:... 169 2e-042
TAIR9_protein||AT4G38100.1 | Symbols: | unknown protein | chr4:... 91 6e-019
TAIR9_protein||AT4G01150.2 | Symbols: | unknown protein | chr4:... 91 9e-019
TAIR9_protein||AT2G46820.1 | Symbols: PTAC8, TMP14, PSAP, PSI-P ... 78 5e-015
TAIR9_protein||AT2G46820.2 | Symbols: PTAC8, TMP14, PSAP, PSI-P ... 78 5e-015
TAIR9_protein||AT1G52220.1 | Symbols: | FUNCTIONS IN: molecular... 66 2e-011
TAIR9_protein||AT1G52220.2 | Symbols: | FUNCTIONS IN: molecular... 63 2e-010
>TAIR9_protein||AT4G01150.1 | Symbols: | unknown protein | chr4:493692-494668
FORWARD
Length = 165
Score = 169 bits (428), Expect = 2e-042
Identities = 79/95 (83%), Positives = 90/95 (94%)
Frame = +1
Query: 316 VDTGELISDLKEKWDAVENKSTVLVYGGGAIVALWLSSIVVGAVNSVPLLPKILELVGLG 495
+DT ELI+DLKEKWD +ENKSTVL+YGGGAIVA+WLSSIVVGA+NSVPLLPK++ELVGLG
Sbjct: 71 IDTNELITDLKEKWDGLENKSTVLIYGGGAIVAVWLSSIVVGAINSVPLLPKVMELVGLG 130
Query: 496 YTGWFVYRYLLFKSSRKELATDIDALKKKITGTE* 600
YTGWFVYRYLLFKSSRKELA DI++LKKKI G+E*
Sbjct: 131 YTGWFVYRYLLFKSSRKELAEDIESLKKKIAGSE* 165
>TAIR9_protein||AT4G38100.1 | Symbols: | unknown protein |
chr4:17887033-17888177 REVERSE
Length = 194
Score = 91 bits (225), Expect = 6e-019
Identities = 42/90 (46%), Positives = 66/90 (73%), Gaps = 3/90 (3%)
Frame = +1
Query: 328 ELISDLKEKWDAVENKSTVLVYGGGAIVALWLSSIVVGAVNSVPLLPKILELVGLGYTGW 507
E ++D+K D ++L+YG GAIVAL+L+S +V ++ ++PL PK++E+VGLGYT W
Sbjct: 105 EFLNDIKLDSD---KTYSILLYGSGAIVALYLTSAIVSSLEAIPLFPKLMEVVGLGYTLW 161
Query: 508 FVYRYLLFKSSRKELATDIDALKKKITGTE 597
F RYLLFK +R+EL T + +KK++ G++
Sbjct: 162 FTTRYLLFKRNREELKTKVSEIKKQVLGSD 191
>TAIR9_protein||AT4G01150.2 | Symbols: | unknown protein | chr4:493692-494379
FORWARD
Length = 126
Score = 91 bits (223), Expect = 9e-019
Identities = 41/50 (82%), Positives = 48/50 (96%)
Frame = +1
Query: 316 VDTGELISDLKEKWDAVENKSTVLVYGGGAIVALWLSSIVVGAVNSVPLL 465
+DT ELI+DLKEKWD +ENKSTVL+YGGGAIVA+WLSSIVVGA+NSVPL+
Sbjct: 71 IDTNELITDLKEKWDGLENKSTVLIYGGGAIVAVWLSSIVVGAINSVPLV 120
>TAIR9_protein||AT2G46820.1 | Symbols: PTAC8, TMP14, PSAP, PSI-P | PSI-P
(PHOTOSYSTEM I P SUBUNIT); DNA binding | chr2:19243729-19244870
FORWARD
Length = 175
Score = 78 bits (191), Expect = 5e-015
Identities = 34/91 (37%), Positives = 57/91 (62%)
Frame = +1
Query: 328 ELISDLKEKWDAVENKSTVLVYGGGAIVALWLSSIVVGAVNSVPLLPKILELVGLGYTGW 507
E++ +E W+ V++K + +VALW S+ ++ A++ +PL+P +LELVG+GYTGW
Sbjct: 85 EIVKTAQEAWEKVDDKYAIGSLAFAGVVALWGSAGMISAIDRLPLVPGVLELVGIGYTGW 144
Query: 508 FVYRYLLFKSSRKELATDIDALKKKITGTE* 600
F Y+ L+FK R+ L + + K I G+ *
Sbjct: 145 FTYKNLVFKPDREALFEKVKSTYKDILGSS* 175
>TAIR9_protein||AT2G46820.2 | Symbols: PTAC8, TMP14, PSAP, PSI-P | PSI-P
(PHOTOSYSTEM I P SUBUNIT); DNA binding | chr2:19243729-19244870
FORWARD
Length = 175
Score = 78 bits (191), Expect = 5e-015
Identities = 34/91 (37%), Positives = 57/91 (62%)
Frame = +1
Query: 328 ELISDLKEKWDAVENKSTVLVYGGGAIVALWLSSIVVGAVNSVPLLPKILELVGLGYTGW 507
E++ +E W+ V++K + +VALW S+ ++ A++ +PL+P +LELVG+GYTGW
Sbjct: 85 EIVKTAQEAWEKVDDKYAIGSLAFAGVVALWGSAGMISAIDRLPLVPGVLELVGIGYTGW 144
Query: 508 FVYRYLLFKSSRKELATDIDALKKKITGTE* 600
F Y+ L+FK R+ L + + K I G+ *
Sbjct: 145 FTYKNLVFKPDREALFEKVKSTYKDILGSS* 175
>TAIR9_protein||AT1G52220.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: PSI-P (PHOTOSYSTEM I P SUBUNIT); DNA binding
(TAIR:AT2G46820.2); Has 203 Blast hits to 203 proteins in 35 species:
Archae - 0; Bacteria - 66; Metazoa - 0; Fungi - 0; Plants - 136;
Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). |
chr1:19453770-19454605 REVERSE
Length = 157
Score = 66 bits (160), Expect = 2e-011
Identities = 29/76 (38%), Positives = 50/76 (65%)
Frame = +1
Query: 328 ELISDLKEKWDAVENKSTVLVYGGGAIVALWLSSIVVGAVNSVPLLPKILELVGLGYTGW 507
+++S ++ WD E++ ++ G IVALW S ++ A++ +P++ ELVG+ ++ W
Sbjct: 68 DVVSTIQNVWDKSEDRLGLIGLGFAGIVALWASLNLITAIDKLPVISSGFELVGILFSTW 127
Query: 508 FVYRYLLFKSSRKELA 555
F YRYLLFK R+EL+
Sbjct: 128 FTYRYLLFKPDRQELS 143
>TAIR9_protein||AT1G52220.2 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: PSI-P (PHOTOSYSTEM I P SUBUNIT); DNA binding
(TAIR:AT2G46820.2); Has 203 Blast hits to 203 proteins in 35 species:
Archae - 0; Bacteria - 66; Metazoa - 0; Fungi - 0; Plants - 136;
Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). |
chr1:19453770-19454605 REVERSE
Length = 156
Score = 63 bits (152), Expect = 2e-010
Identities = 28/69 (40%), Positives = 45/69 (65%)
Frame = +1
Query: 349 EKWDAVENKSTVLVYGGGAIVALWLSSIVVGAVNSVPLLPKILELVGLGYTGWFVYRYLL 528
+ WD E++ ++ G IVALW S ++ A++ +P++ ELVG+ ++ WF YRYLL
Sbjct: 74 QNWDKSEDRLGLIGLGFAGIVALWASLNLITAIDKLPVISSGFELVGILFSTWFTYRYLL 133
Query: 529 FKSSRKELA 555
FK R+EL+
Sbjct: 134 FKPDRQELS 142
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 922,250,500
Number of Sequences: 33410
Number of Extensions: 922250500
Number of Successful Extensions: 51428098
Number of sequences better than 0.0: 0
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