BLASTX 7.6.2
Query= RU03064 /QuerySize=505
(504 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G51400.1 | Symbols: | photosystem II 5 kD pro... 89 1e-018
TAIR9_protein||AT3G21055.1 | Symbols: PSBTN | PSBTN (photosystem... 76 1e-014
>TAIR9_protein||AT1G51400.1 | Symbols: | photosystem II 5 kD protein |
chr1:19052172-19052492 REVERSE
Length = 107
Score = 89 bits (219), Expect = 1e-018
Identities = 54/110 (49%), Positives = 63/110 (57%), Gaps = 8/110 (7%)
Frame = +1
Query: 100 MASMTMTASFLASTITKP----STPRRSLIVAKASRAPEAEKVTVEMKKGKEENSSGRRD 267
MASMTMT+SFL + P S RRSL V KAS +E T K +E++ RRD
Sbjct: 1 MASMTMTSSFLPTVSNLPANISSNSRRSLTVVKAS---GSENTTSLENKKQEQSMKMRRD 57
Query: 268 LIFXXXXXXX-XXXXXXXXXDEPERGTPAAKKKYAPVCVTMPTARICRK* 414
L+F DEP+RGT AAKKKYAPVCVTMPTA+ICR *
Sbjct: 58 LVFTAAAAAVCSLAKVAMADDEPKRGTEAAKKKYAPVCVTMPTAKICRN* 107
>TAIR9_protein||AT3G21055.1 | Symbols: PSBTN | PSBTN (photosystem II subunit T)
| chr3:7376761-7377072 REVERSE
Length = 104
Score = 76 bits (185), Expect = 1e-014
Identities = 46/106 (43%), Positives = 61/106 (57%), Gaps = 7/106 (6%)
Frame = +1
Query: 100 MASMTMTASFLASTITKPS-TPRRSLIVAKASRAPEAEKVTVEMKKGKEENSSGRRDLIF 276
MASMTMTA+F + PS T R L V +AS + + V+ ++ +++ RRDL+F
Sbjct: 1 MASMTMTATFFPAVAKVPSATGGRRLSVVRASTSDNTPSLEVK----EQSSTTMRRDLMF 56
Query: 277 XXXXXX--XXXXXXXXXXDEPERGTPAAKKKYAPVCVTMPTARICR 408
+EP+RGT AAKKKYA VCVTMPTA+ICR
Sbjct: 57 TAAAAAVCSLAKVAMAEEEEPKRGTEAAKKKYAQVCVTMPTAKICR 102
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 922,250,500
Number of Sequences: 33410
Number of Extensions: 922250500
Number of Successful Extensions: 51428098
Number of sequences better than 0.0: 0
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