BLASTX 7.6.2
Query= RU03120 /QuerySize=226
(225 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G39760.1 | Symbols: ATBPM3, BPM3 | BPM3; prote... 87 1e-018
TAIR9_protein||AT2G39760.2 | Symbols: ATBPM3, BPM3 | BPM3; prote... 87 1e-018
TAIR9_protein||AT5G19000.1 | Symbols: ATBPM1 | ATBPM1 (BTB-POZ a... 65 9e-012
TAIR9_protein||AT3G06190.1 | Symbols: ATBPM2, BPM2 | BPM2 (BTB-P... 59 4e-010
>TAIR9_protein||AT2G39760.1 | Symbols: ATBPM3, BPM3 | BPM3; protein binding |
chr2:16583213-16585983 FORWARD
Length = 409
Score = 87 bits (215), Expect = 1e-018
Identities = 40/62 (64%), Positives = 52/62 (83%)
Frame = +3
Query: 3 VDKVVVKDVEPFIFKAMLLFIYADKLPDIREVTGSSSLCTFTVMVQHLLAAADLYNLERL 182
VD++V+ D+EP IFKAML FIY D LP++ E+TGS+S +FT M+QHLLAAADLY+L RL
Sbjct: 232 VDRIVIDDIEPSIFKAMLSFIYTDVLPNVHEITGSTSASSFTNMIQHLLAAADLYDLARL 291
Query: 183 KL 188
K+
Sbjct: 292 KI 293
>TAIR9_protein||AT2G39760.2 | Symbols: ATBPM3, BPM3 | BPM3; protein binding |
chr2:16583213-16584815 FORWARD
Length = 344
Score = 87 bits (215), Expect = 1e-018
Identities = 40/62 (64%), Positives = 52/62 (83%)
Frame = +3
Query: 3 VDKVVVKDVEPFIFKAMLLFIYADKLPDIREVTGSSSLCTFTVMVQHLLAAADLYNLERL 182
VD++V+ D+EP IFKAML FIY D LP++ E+TGS+S +FT M+QHLLAAADLY+L RL
Sbjct: 232 VDRIVIDDIEPSIFKAMLSFIYTDVLPNVHEITGSTSASSFTNMIQHLLAAADLYDLARL 291
Query: 183 KL 188
K+
Sbjct: 292 KI 293
>TAIR9_protein||AT5G19000.1 | Symbols: ATBPM1 | ATBPM1 (BTB-POZ and MATH domain
1); protein binding | chr5:6342563-6344641 FORWARD
Length = 408
Score = 65 bits (156), Expect = 9e-012
Identities = 31/58 (53%), Positives = 43/58 (74%)
Frame = +3
Query: 12 VVVKDVEPFIFKAMLLFIYADKLPDIREVTGSSSLCTFTVMVQHLLAAADLYNLERLK 185
+ ++D+E IFK +L FIY D+LPD++E+ G+ S T++ QHLLAAAD Y LERLK
Sbjct: 244 ITIEDMEAPIFKVLLHFIYWDELPDMQELIGTDSTLASTLVAQHLLAAADRYALERLK 301
>TAIR9_protein||AT3G06190.1 | Symbols: ATBPM2, BPM2 | BPM2 (BTB-POZ AND MATH
DOMAIN 2); protein binding | chr3:1874577-1876575 REVERSE
Length = 407
Score = 59 bits (142), Expect = 4e-010
Identities = 27/58 (46%), Positives = 43/58 (74%)
Frame = +3
Query: 12 VVVKDVEPFIFKAMLLFIYADKLPDIREVTGSSSLCTFTVMVQHLLAAADLYNLERLK 185
++++DV+ IFK +L FIY D++PD++++ G+ T++ QHLLAAAD Y LERL+
Sbjct: 243 IIIEDVQAPIFKMLLHFIYWDEMPDMQDLIGTDLKWASTLVAQHLLAAADRYALERLR 300
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 922,250,500
Number of Sequences: 33410
Number of Extensions: 922250500
Number of Successful Extensions: 51428098
Number of sequences better than 0.0: 0
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