BLASTX 7.6.2
Query= RU03154 /QuerySize=672
(671 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G44590.2 | Symbols: | 60S acidic ribosomal pr... 96 2e-020
TAIR9_protein||AT3G44590.1 | Symbols: | 60S acidic ribosomal pr... 96 2e-020
TAIR9_protein||AT2G27710.1 | Symbols: | 60S acidic ribosomal pr... 92 2e-019
TAIR9_protein||AT2G27710.2 | Symbols: | 60S acidic ribosomal pr... 92 2e-019
TAIR9_protein||AT2G27710.3 | Symbols: | 60S acidic ribosomal pr... 92 2e-019
TAIR9_protein||AT2G27720.1 | Symbols: | 60S acidic ribosomal pr... 91 7e-019
TAIR9_protein||AT3G28500.1 | Symbols: | 60S acidic ribosomal pr... 79 2e-015
TAIR9_protein||AT5G40040.1 | Symbols: | 60S acidic ribosomal pr... 77 8e-015
TAIR9_protein||AT2G27720.3 | Symbols: | 60S acidic ribosomal pr... 49 2e-006
TAIR9_protein||AT2G27720.2 | Symbols: | 60S acidic ribosomal pr... 48 6e-006
>TAIR9_protein||AT3G44590.2 | Symbols: | 60S acidic ribosomal protein P2
(RPP2D) | chr3:16163983-16164658 FORWARD
Length = 112
Score = 96 bits (237), Expect = 2e-020
Identities = 54/113 (47%), Positives = 64/113 (56%), Gaps = 3/113 (2%)
Frame = -1
Query: 575 MKVVAAYLLAVLGGNTSPSADDVKNILSSVGAEADGDRIELLLSQVKGKDITELIASGRE 396
MKV AA+LLAVLGGN +PSAD++K+I+ +VGA+ DG+ IELLL +V GKDI ELIASGRE
Sbjct: 1 MKVAAAFLLAVLGGNANPSADNIKDIIGAVGADVDGESIELLLKEVSGKDIAELIASGRE 60
Query: 395 KLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLF 237
KL SDDDMGFSLF
Sbjct: 61 KL---ASVPSGGGVAVSAAPSSGGGGAAAPAEKKEAKKEEKEESDDDMGFSLF 110
>TAIR9_protein||AT3G44590.1 | Symbols: | 60S acidic ribosomal protein P2
(RPP2D) | chr3:16163983-16164658 FORWARD
Length = 112
Score = 96 bits (237), Expect = 2e-020
Identities = 54/113 (47%), Positives = 64/113 (56%), Gaps = 3/113 (2%)
Frame = -1
Query: 575 MKVVAAYLLAVLGGNTSPSADDVKNILSSVGAEADGDRIELLLSQVKGKDITELIASGRE 396
MKV AA+LLAVLGGN +PSAD++K+I+ +VGA+ DG+ IELLL +V GKDI ELIASGRE
Sbjct: 1 MKVAAAFLLAVLGGNANPSADNIKDIIGAVGADVDGESIELLLKEVSGKDIAELIASGRE 60
Query: 395 KLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLF 237
KL SDDDMGFSLF
Sbjct: 61 KL---ASVPSGGGVAVSAAPSSGGGGAAAPAEKKEAKKEEKEESDDDMGFSLF 110
>TAIR9_protein||AT2G27710.1 | Symbols: | 60S acidic ribosomal protein P2
(RPP2B) | chr2:11816929-11817670 FORWARD
Length = 116
Score = 92 bits (228), Expect = 2e-019
Identities = 53/116 (45%), Positives = 62/116 (53%), Gaps = 1/116 (0%)
Frame = -1
Query: 575 MKVVAAYLLAVLGGNTSPSADDVKNILSSVGAEADGDRIELLLSQVKGKDITELIASGRE 396
MKVVAAYLLAVL G SP++ D+K IL SVGAE + +IELLL +VKGKD+ ELIA+GRE
Sbjct: 1 MKVVAAYLLAVLSGKASPTSADIKTILGSVGAETEDSQIELLLKEVKGKDLAELIAAGRE 60
Query: 395 KLXXX-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD* 231
KL SDDDMGFSLF+*
Sbjct: 61 KLASVPSGGGGGVAVASATSGGGGGGGASAAESKKEEKKEEKEESDDDMGFSLFE* 116
>TAIR9_protein||AT2G27710.2 | Symbols: | 60S acidic ribosomal protein P2
(RPP2B) | chr2:11816929-11817670 FORWARD
Length = 116
Score = 92 bits (228), Expect = 2e-019
Identities = 53/116 (45%), Positives = 62/116 (53%), Gaps = 1/116 (0%)
Frame = -1
Query: 575 MKVVAAYLLAVLGGNTSPSADDVKNILSSVGAEADGDRIELLLSQVKGKDITELIASGRE 396
MKVVAAYLLAVL G SP++ D+K IL SVGAE + +IELLL +VKGKD+ ELIA+GRE
Sbjct: 1 MKVVAAYLLAVLSGKASPTSADIKTILGSVGAETEDSQIELLLKEVKGKDLAELIAAGRE 60
Query: 395 KLXXX-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD* 231
KL SDDDMGFSLF+*
Sbjct: 61 KLASVPSGGGGGVAVASATSGGGGGGGASAAESKKEEKKEEKEESDDDMGFSLFE* 116
>TAIR9_protein||AT2G27710.3 | Symbols: | 60S acidic ribosomal protein P2
(RPP2B) | chr2:11816929-11817670 FORWARD
Length = 116
Score = 92 bits (228), Expect = 2e-019
Identities = 53/116 (45%), Positives = 62/116 (53%), Gaps = 1/116 (0%)
Frame = -1
Query: 575 MKVVAAYLLAVLGGNTSPSADDVKNILSSVGAEADGDRIELLLSQVKGKDITELIASGRE 396
MKVVAAYLLAVL G SP++ D+K IL SVGAE + +IELLL +VKGKD+ ELIA+GRE
Sbjct: 1 MKVVAAYLLAVLSGKASPTSADIKTILGSVGAETEDSQIELLLKEVKGKDLAELIAAGRE 60
Query: 395 KLXXX-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD* 231
KL SDDDMGFSLF+*
Sbjct: 61 KLASVPSGGGGGVAVASATSGGGGGGGASAAESKKEEKKEEKEESDDDMGFSLFE* 116
>TAIR9_protein||AT2G27720.1 | Symbols: | 60S acidic ribosomal protein P2
(RPP2A) | chr2:11818696-11819370 FORWARD
Length = 116
Score = 91 bits (223), Expect = 7e-019
Identities = 52/116 (44%), Positives = 62/116 (53%), Gaps = 1/116 (0%)
Frame = -1
Query: 575 MKVVAAYLLAVLGGNTSPSADDVKNILSSVGAEADGDRIELLLSQVKGKDITELIASGRE 396
MKVVAA+LLAVL G SP+ D+K+IL SVGAE + +IELLL +VKGKD+ ELIA+GRE
Sbjct: 1 MKVVAAFLLAVLSGKASPTTGDIKDILGSVGAETEDSQIELLLKEVKGKDLAELIAAGRE 60
Query: 395 KLXXX-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD* 231
KL SDDDMGFSLF+*
Sbjct: 61 KLASVPSGGGGGVAVASATSGGGGGGGAPAAESKKEEKKEEKEESDDDMGFSLFE* 116
>TAIR9_protein||AT3G28500.1 | Symbols: | 60S acidic ribosomal protein P2
(RPP2C) | chr3:10682204-10682551 FORWARD
Length = 116
Score = 79 bits (194), Expect = 2e-015
Identities = 38/62 (61%), Positives = 51/62 (82%)
Frame = -1
Query: 575 MKVVAAYLLAVLGGNTSPSADDVKNILSSVGAEADGDRIELLLSQVKGKDITELIASGRE 396
MKV+AA+LLA LGGN +P+++D+K IL SVGAE D +I+LL S +K D+TELIA+GRE
Sbjct: 1 MKVIAAFLLAKLGGNENPTSNDLKKILESVGAEIDETKIDLLFSLIKDHDVTELIAAGRE 60
Query: 395 KL 390
K+
Sbjct: 61 KM 62
>TAIR9_protein||AT5G40040.1 | Symbols: | 60S acidic ribosomal protein P2
(RPP2E) | chr5:16029913-16030257 REVERSE
Length = 115
Score = 77 bits (188), Expect = 8e-015
Identities = 38/62 (61%), Positives = 48/62 (77%)
Frame = -1
Query: 575 MKVVAAYLLAVLGGNTSPSADDVKNILSSVGAEADGDRIELLLSQVKGKDITELIASGRE 396
MKVVAAYLLA L GN +PS D+K I+ SVGAE D ++I+L S +K +D+TELIA GRE
Sbjct: 1 MKVVAAYLLAKLSGNENPSVADLKKIVESVGAEIDQEKIDLFFSLIKDRDVTELIAVGRE 60
Query: 395 KL 390
K+
Sbjct: 61 KM 62
>TAIR9_protein||AT2G27720.3 | Symbols: | 60S acidic ribosomal protein P2
(RPP2A) | chr2:11818696-11819370 FORWARD
Length = 128
Score = 49 bits (115), Expect = 2e-006
Identities = 23/33 (69%), Positives = 28/33 (84%)
Frame = -1
Query: 488 VGAEADGDRIELLLSQVKGKDITELIASGREKL 390
VGAE + +IELLL +VKGKD+ ELIA+GREKL
Sbjct: 42 VGAETEDSQIELLLKEVKGKDLAELIAAGREKL 74
>TAIR9_protein||AT2G27720.2 | Symbols: | 60S acidic ribosomal protein P2
(RPP2A) | chr2:11818696-11819370 FORWARD
Length = 131
Score = 48 bits (112), Expect = 6e-006
Identities = 26/52 (50%), Positives = 32/52 (61%)
Frame = -1
Query: 545 VLGGNTSPSADDVKNILSSVGAEADGDRIELLLSQVKGKDITELIASGREKL 390
+LG D I GAE + +IELLL +VKGKD+ ELIA+GREKL
Sbjct: 26 ILGSGIMVLVLDCVVIGDCFGAETEDSQIELLLKEVKGKDLAELIAAGREKL 77
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 922,250,500
Number of Sequences: 33410
Number of Extensions: 922250500
Number of Successful Extensions: 51428098
Number of sequences better than 0.0: 0
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